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Human gut microbiota

These strains isolated from the human gut were deposited by the University of Marseille.

For further information see the following publication:
http://www.nature.com/articles/nmicrobiol2016203

Species

DSM No.

''Actinomyces polynesiensis''

27066

"Actinomyces  provencensis" Ndongo et al. 2017

101041

Aeromicrobium  massiliense Ramasamy et al. 2014

25782

"Alistipes  senegalensis" Mishra et al. 2012

25460

"Alistipes  sp."

102308

Alistipes  timonensis Lagier et al. 2014

25383

"Anaerococcus  jeddahensis" Dione et al. 2018

100537

Anaerococcus  rubeinfantis corrig. Tidjani Alou et al. 2017

101186

Anaerococcus  senegalensis Lagier et al. 2014

25366

Anaerococcus  vaginalis (Li et al. 1992) Ezaki et al. 2001

25446

''Anaeromassilibacillus senegalensis''

102954

Anaerosalibacter  massiliensis Dione et al. 2016

27308

"Anaerotruncus  massiliensis" Togo et al. 2019

100567

"Bacillus  mediterraneensis" Cadoret et al. 2017

102091

''Bacillus niameyensis''

29725

Bacillus  rubiinfantis et al. 2016

28615

"Bacillus  sp."

26092

"Bacillus  sp."

27838

"Bacillus  sp."

28582

"Bacillus  testis" Cimmino et al. 2016

101190

''Bacillus timonensis''

25372

"Bacteroides  bouchesdurhonensis" Ndongo et al. 2019

103120

"Bacteroides  mediterraneensis" Andrieu et al. 2018

103033

"Bacteroides  neonati" Cassir et al. 2017

26805

"Bacteroides  timonensis"

26083

''Bariatricus massiliensis''

101783

''Beduini massiliensis''

100188

"Bittarella  massiliensis" Durand et al. 2017

101081

"Blastococcus  sp."

45753

"Blautia  massiliensis" Durand et al. 2017

101187

"Brachybacterium  massiliense" Tidjani Alou et al. 2017

101766

Brevibacillus  massiliensis Hugon et al. 2013

25447

Brevibacterium  senegalense Kokcha et al. 2013

25783

Cellulomonas  massiliensis Lagier et al. 2015 emend. Nouioui et al. 2018

25695

''Christensenella massiliensis''

102344

''Christensenella timonensis''

102800

''Clostridium ihumii''

26098

Clostridium  jeddahense Lagier et al. 2016

27834

''Clostridium merdae''

103669

''Clostridium polynesiense''

27072

Clostridium  saudiense corrig. Angelakis et al. 2016

27835

Clostridium  senegalense Mishra et al. 2015

25507

"Colibacter  massiliensis" Mailhe et al. 2017

103304

Collinsella  ihumii Khedher et al. 2022

101062

Collinsella  massiliensis Padmanabhan et al. 2016

26110

"Collinsella  sp."

100823

"Coprococcus  sp."

103635

''Corynebacterium ihumii''

45751

Corynebacterium  jeddahense Edouard et al. 2017

45997

"Corynebacterium  provencense" Lo et al. 2019

101074

"Culturomica  massiliensis" Ndongo et al. 2016

103121

''Desnuesiella massiliensis''

101500

Dielma  fastidiosa Ramasamy et al. 2016

26099

"Dorea  sp."

26146

''Drancourtella massiliensis''

100357

''Eisenbergiella massiliensis''

101499

''Emergencia timonensis''

101844

Enorma  massiliensis Mishra et al. 2016

25476

"Enorma  phocaeensis" Ndongo et al. 2017

103656

Enorma  timonensis Ramasamy et al. 2016

26111

''Enterobacter timonensis''

101775

"Fenollaria  sp."

101080

Fournierella  massiliensis Togo et al. 2017

100451

"Gabonia  massiliensis" Mourembou et al. 2016

100571

"Gorbachella  massiliensis" Durand et al. 2017

101082

"Gracilibacillus  timonensis" Diop et al. 2019

103076

Holdemania  massiliensis Mishra et al. 2016

26143

"Hugonella  massiliensis" Elsawi et al. 2017

101782

"Ileibacterium  massiliense" Mailhe et al. 2017

103486

''Inediibacterium massiliense''

100590

''Intestinimonas massiliensis''

100417

''Intestinimonas timonensis''

100769

"Kallipyga  gabonensis" Mourembou et al. 2016

100575

Kallipyga  massiliensis Hugon et al. 2016

26229

''Khelaifiella massiliensis''

100591

Kurthia  massiliensis Roux et al. 2013

24639

Kurthia  senegalensis Roux et al. 2016

24641

Kurthia  senegalensis Roux et al. 2016

24642

"Kurthia  sp."

24643

''Lachnoclostridium bouchesdurhonense''

100751

''Lachnoclostridium massiliosenegalense''

102084

''Lachnoclostridium touaregense''

102219

"Lagierella  massiliensis" Traore et al. 2016

100854

"Marseilla  massiliensis" Ricaboni et al. 2016

103035

''Massilibacillus massiliensis''

102838

''Massilibacterium senegalense''

100455

"Massilimicrobiota  timonensis" Tall et al. 2019

101840

"Massilioclostridium  coli" Lo et al. 2017

103344

Megamonas  funiformis Sakon et al. 2008

103915

Megasphaera  massiliensis Padmanabhan et al. 2016

26228

"Metaprevotella  massiliensis" Ricaboni et al. 2017

103534

Microvirga  massiliensis Caputo et al. 2016

26813

''Neglecta timonensis''

102082

Neobacillus  jeddahensis (Bittar et al. 2017) Patel and Gupta 2020

28281

Nesterenkonia  massiliensis Edouard et al. 2016

26221

''Niameybacter massiliensis''

100592

Nocardioides  massiliensis Dubourg et al. 2016

28216

Nosocomiicoccus  massiliensis Mishra et al. 2016

26222

Noviherbaspirillum  massiliense (Lagier et al. 2014) Chaudhary and Kim 2017

25712

"Numidum  massiliense" Tidjani Alou et al. 2016

29571

"Oceanobacillus  jeddahense" Khelaifia et al. 2016

28586

Olsenella  massiliensis Zgheib et al. 2021

100642

"Olsenella  timonensis" Ndongo et al. 2019

102072

"Pacaella  massiliensis" Ndongo et al. 2017

103390

''Paenibacillus antibioticophila''

28228

"Paenibacillus  bouchesdurhonensis" Pham et al. 2017

103972

Paenibacillus  ihumii Togo et al. 2017

100664

"Paenibacillus  phocaensis" Tidjani Alou et al. 2017

101777

"Paenibacillus  rubinfantis" Pham et al. 2017

101191

Paenibacillus  senegalensis Mishra et al. 2015

25958

"Paenibacillus  sp."

26108

"Paenibacillus  sp."

100384

"Paenibacillus  tuaregi" Pham et al. 2017

102801

"Parabacteroides  sp."

101860

''Peptoniphilus grossensis''

25475

''Peptoniphilus obesi''

25489

Peptoniphilus  senegalensis Mishra et al. 2016

25694

"Peptoniphilus  sp."

103346

Peptoniphilus  timonensis Mishra et al. 2015

25367

"Phytobacter  massiliensis" (Lagier et al. 2014) Ma et al. 2020

26120

Prevotella  phocaeensis Afouda et al. 2019

103364

"Pseudomonas  sp."

29075

"Raoultibacter  massiliensis" Traore et al. 2016

103407

Risungbinella  massiliensis Dubourg et al. 2016

46691

Robertmurraya  massiliosenegalensis (Ramasamy et al. 2016) Gupta et al. 2020

25957

"Rubeoparvulum  massiliense" Tidjani Alou et al. 2017

100479

Senegalimassilia  anaerobia corrig. Lagier et al. 2014 emend. Nouioui et al. 2018

25959

''Soleaferrea massiliensis''

26100

Streptococcus  oralis subsp. dentisani (Camelo-Castillo et al. 2014) Jensen et al. 2016

27089

"Streptococcus  timonensis" Ricaboni et al. 2017

103349

"Tessaracoccus  massiliensis" Seck et al. 2016

29060

"Tidjanibacter  massiliensis" Mailhe et al. 2017

103552

Timonella  senegalensis Mishra et al. 2016

25696

"unclassified  bacterium"

28716

"unclassified  bacterium"

100743

"unclassified  bacterium"

102218

"unclassified  bacterium"

102883

''Virgibacillus massiliensis''

28587

"Vitreoscilla  massiliensis"

100958

''Xanthomonas massiliensis''

100900