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Publications of the DSMZ

Here you will find a complete list of all scientific publications.

Publications
2018 Reiner,J.E., Lapp,C.J., Bunk,B., Sproer,C., Overmann,J., Gescher,J. ( 2018 ) Complete Genome Sequence of Kyrpidia sp. Strain EA-1, a Thermophilic Knallgas Bacterium, Isolated from the Azores Genome Announc 6 (3)

https://www.ncbi.nlm.nih.gov/pubmed/29348358
2018 Pati,N.B., Doijad,S.P., Schultze,T., Mannala,G.K., Yao,Y., Jaiswal,S., Ryan,D., Suar,M., Gwozdzinski,K., Bunk,B., Mraheil,M.A., Marahiel,M.A., Hegemann,J.D., Sproer,C., Goesmann,A., Falgenhauer,L., Hain,T., Imirzalioglu,C., Mshana,S.E., Overmann,J., Chakraborty,T. ( 2018 ) Enterobacter bugandensis: a novel enterobacterial species associated with severe clinical infection Sci Rep 8 (1) :5392.

https://www.ncbi.nlm.nih.gov/pubmed/29599516
2018 Pascual,J., Foesel,B.U., Geppert,A., Huber,K.J., Boedeker,C., Luckner,M., Wanner,G., Overmann,J. ( 2018 ) Roseisolibacter agri gen. nov., sp. nov., a novel slow-growing member of the under-represented phylum Gemmatimonadetes Int J Syst Evol Microbiol 68 (4) :1028-1036.

https://www.ncbi.nlm.nih.gov/pubmed/29458671
2018 Nell,S., Estibariz,I., Krebes,J., Bunk,B., Graham,D.Y., Overmann,J., Song,Y., Sproer,C., Yang,I., Wex,T., Korlach,J., Malfertheiner,P., Suerbaum,S. ( 2018 ) Genome and Methylome Variation in Helicobacter pylori With a cag Pathogenicity Island During Early Stages of Human Infection Gastroenterology 154 (3) :612-623 e7.

https://www.ncbi.nlm.nih.gov/pubmed/29066327
2018 Murillo,T., Ramirez-Vargas,G., Riedel,T., Overmann,J., Andersen,J.M., Guzman-Verri,C., Chaves-Olarte,E., Rodriguez,C. ( 2018 ) Two Groups of Cocirculating, Epidemic Clostridiodes difficile Strains Microdiversify through Different Mechanisms Genome Biol Evol 10 (3) :982-998.

https://www.ncbi.nlm.nih.gov/pubmed/29617810
2018 Kemter,F.S., Messerschmidt,S.J., Schallopp,N., Sobetzko,P., Lang,E., Bunk,B., Sproer,C., Teschler,J.K., Yildiz,F.H., Overmann,J., Waldminghaus,T. ( 2018 ) Synchronous termination of replication of the two chromosomes is an evolutionary selected feature in Vibrionaceae PLoS Genet 14 (3) :e1007251.

https://www.ncbi.nlm.nih.gov/pubmed/29505558
2018 Gutleben,J., ChaibDeMares,M., vanElsas,J.D., Smidt,H., Overmann,J., Sipkema,D. ( 2018 ) The multi-omics promise in context: from sequence to microbial isolate Crit Rev Microbiol 44 (2) :212-229.

https://www.ncbi.nlm.nih.gov/pubmed/28562180
2018 Gross,U., Brzuszkiewicz,E., Gunka,K., Starke,J., Riedel,T., Bunk,B., Sproer,C., Wetzel,D., Poehlein,A., Chibani,C., Bohne,W., Overmann,J., Zimmermann,O., Daniel,R., Liesegang,H. ( 2018 ) Comparative genome and phenotypic analysis of three Clostridioides difficile strains isolated from a single patient provide insight into multiple infection of C. difficile BMC Genomics 19 (1) :1.

https://www.ncbi.nlm.nih.gov/pubmed/29291715
2018 Becker,K.W., Elling,F.J., Schroder,J.M., Lipp,J.S., Goldhammer,T., Zabel,M., Elvert,M., Overmann,J., Hinrichs,K.U. ( 2018 ) Isoprenoid quinones resolve the stratification of microbial redox processes in a biogeochemical continuum from the photic zone to deep anoxic sediments of the Black Sea Appl Environ Microbiol

https://www.ncbi.nlm.nih.gov/pubmed/29523543
2018 Righeti,L., Paris,R., Ratti,C., Onofri,C., Calzolari,D., Menzel,W., Knierim,D., Magagnini,G., Pacifico,D., Grassi,G. ( 2018 ) Not the one, but the only one: about Cannabis cryptic virus in plants showing 'hemp streak' disease symptoms. European Journal of Plant Pathology :150:575-588.

2018 Menzel,W., Winter,S., Westerman,A., Heldens,J. ( 2018 ) Partial genomic sequence of a new Tobamovirus from Piper Acta Horticulturae 1193 :83-88.

2018 Menzel,W., Richert-Pöggeler,K.R., Winter,S., Knierim,D. ( 2018 ) Characterization of a nucleorhabdovirus from Physostegia Acta Horticulturae 1193 :29-38.

2018 Gaafar,Y.Z.A., Abdelgalil,M.A.M., Knierim,D., Richert-Pöggeler,K.R., Menzel,W., Winter,S., Ziebell,H. ( 2018 ) First report of physostegia chlorotic mottle virus on tomato (Solanum lycopersicum) in Germany Plant Disease 102 (1)

2018 Yepes,L.M., Cieniewicz,E.J., Krenz,B., McLane,H., Thompson,J.R., Perry,K.L., Fuchs,M. ( 2018 ) Causative Role of Grapevine Red Blotch Virus in Red Blotch Disease Phytopathology

2018 Mohr,K.I., Moradi,A., Glaeser,S.P., Kämpfer,P., Gemperlein,K., Nübel,U., Schumann,P., Müller,R., Wink,J. ( 2018 ) Nannocystis konarekensis sp. nov., a novel myxobacterium from an Iranian desert Int J Syst Evol Microbiol

http://www.ncbi.nlm.nih.gov/pubmed/29458458
2018 Chen,S., Nagel,S., Schneider,B., Dai,H., Geffers,R., Kaufmann,M., Meyer,C., Pommerenke,C., Thress,K.S., Li,J., Quentmeier,H., Drexler,H.G., MacLeod,R.A.F. ( 2018 ) A new ETV6-NTRK3 cell line model reveals MALAT1 as a novel therapeutic target - a short report Cell Oncol (Dordr) 41 (1) :93-101.

https://www.ncbi.nlm.nih.gov/pubmed/29119387
2018 Xu,X., Nagel,S., Quentmeier,H., Wang,Z., Pommerenke,C., Dirks,W.G., Macleod,R.A.F., Drexler,H.G., Hu,Z. ( 2018 ) KDM3B shows tumor-suppressive activity and transcriptionally regulates HOXA1 through retinoic acid response elements in acute myeloid leukemia Leuk Lymphoma 59 (1) :204-213.

https://www.ncbi.nlm.nih.gov/pubmed/28540746
2017 Overmann,J., Scholz,A.H. ( 2017 ) Microbiological Research Under the Nagoya Protocol: Facts and Fiction Trends Microbiol 25 (2) :85-88.

https://www.ncbi.nlm.nih.gov/pubmed/27887771
2017 Markowetz,F. ( 2017 ) All biology is computational biology PLOS Biology 15 (3) :e2002050.

http://dx.doi.org/10.1371%2Fjournal.pbio.2002050
2017 Starnawski,P., Bataillon,T., Ettema,T.J.G., Jochum,L.M., Schreiber,L., Chen,X., Lever,M.A., Polz,M.F., Jørgensen,B.B., Schramm,A., Kjeldsen,K.U. ( 2017 ) Microbial community assembly and evolution in subseafloor sediment Proceedings of the National Academy of Sciences 114 (11) :2940-2945.

http://www.pnas.org/content/114/11/2940.abstract
2017 Ruf,A., Kanawati,B., Hertkorn,N., Yin,Q.-Z., Moritz,F., Harir,M., Lucio,M., Michalke,B., Wimpenny,J., Shilobreeva,S., Bronsky,B., Saraykin,V., Gabelica,Z., Gougeon,R.D., Quirico,E., Ralew,S., Jakubowski,T., Haack,H., Gonsior,M., Jenniskens,P., Hinman,N.W., Schmitt-Kopplin,P. ( 2017 ) Previously unknown class of metalorganic compounds revealed in meteorites Proceedings of the National Academy of Sciences 114 (11) :2819-2824.

http://www.pnas.org/content/114/11/2819.abstract
2017 Shang,Y., Sikorski,J., Bonkowski,M., Fiore-Donno,A.-M., Kandeler,E., Marhan,S., Boeddinghaus,R.S., Solly,E.F., Schrumpf,M., Schöning,I., Wubet,T., Buscot,F., Overmann,J. ( 2017 ) Inferring interactions in complex microbial communities from nucleotide sequence data and environmental parameters PLOS ONE 12 (3) :e0173765.

http://dx.doi.org/10.1371%2Fjournal.pone.0173765
2017 Kone,N., Bediako,E.A., Silue,S., Kone,D., Koita,O., Menzel,W., Winter,S. ( 2017 ) Influence of planting date on incidence and severity of viral disease on cucurbits under field conditions. Annals of Agricultural Science 62 (99-104)

2017 Rosa,C., Margaria,P., Geib,S.M., Scully,E.D. ( 2017 ) Novel insights into the Elm Yellows phytoplasma genome and into the metagenome of Elm Yellows-infected elms. Proc. American Elm Restoration Workshop 2016 :49-57.

2017 Krapp,S., Schuy,C., Greiner,E., Stephan,I., Alberter,B., Funk,C., Marschall,M., Wege,C., Bailer,S.M., Kleinow,T., Krenz,B. ( 2017 ) Begomoviral Movement Protein Effects in Human and Plant Cells: Towards New Potential Interaction Partners. Viruses 11 (E334)

2017 Guadie,D., Abraham,A., Tesfaye,K., Winter,S., Menzel,W., Knierim,D. ( 2017 ) First report of maize yellow mosaic virus infecting maize (Zea mays) in Ethiopia Plant Disease

2017 Roenhorst,J.W., Lacomme,C., Nisbet,C., Leichtfried,T., Menzel,W., Winter,S., vanderVlug,R.A.A. ( 2017 ) Euphresco project VirusCollect - fulfilling the need for a common collection of plant viruses and viroids for reference EPPO Bulletin 47 :41-47.

2017 Afouda,L.A.C., Kone,D., Zinsou,V., Dossou,L., Kenyon,L., Winter,S., Knierim,D. ( 2017 ) Virus surveys of Capsicum spp. in the Republic of Benin reveal the prevalence of pepper vein yellows virus and the identification of a previously uncharacterised polerovirus species Archives of Virology 162 :1599-1607.

2017 Mbewe,W., Tairo,F., Sseruwagi,P., Ndunguru,J., Duffy,S., Mukasa,S., Benesi,I., Sheat,S., Koerbler,M., Winter,S. ( 2017 ) Variability in P1 gene redefines phylogenetic relationships among cassava brown streak viruses Virology Journal 14 :1-7.

2017 Menzel,W., Winter,S. ( 2017 ) First report of Mint vein banding-associated virus infecting Mentha × gracilis in Germany New Disease Reports 35 :9.

2017 Knierim,D., Menzel,W., Winter,S. ( 2017 ) Analysis of the complete genome sequence of euphorbia ringspot virus, an atypical member of the genus Potyvirus Archives of Virology 162 :291-293.

2017 vanIngen,J., Kohl,T.A., Kranzer,K., Hasse,B., Keller,P., Szafranska,A.K., Hilleman,D., Chand,M., Schreiber,P.W., Sommerstein,R., Berger,C., Genoni,M., Rüegg,C., Troillet,N., Widmer,A.F., Becker,S., Herrmann,M., Eckmanns,T., Haller,S., Höller,C., Debast,S.B., Wolfhagen,M.J., Hopman,J., Kluytmans,J., Langelaar,M., Notermans,D.W., tenOever,J., vandenBaarselaar,P., Vonk,A.B., Vos,M.C., Ahmed,N., Brown,T., Crook,D., Lamagni,T., Phin,N., Smith,G., Zambon,M., Serr,A., Götting,T., Ebner,W., Thürmer,A., Utpatel,C., Spröer,C., Bunk,B., Nübel,U., Bloemberg,G.V., Böttger,E.C., Niemann,S., Wagner,D., Sax,H. ( 2017 ) Global outbreak of severe Mycobacterium chimaera disease after cardiac surgery: a molecular epidemiological study The Lancet Infectious Diseases S1473-3099(17) :30324-9.

2017 Gerlach,R.G., Walter,S., McClelland,M., Schmidt,C., Steglich,M., Prager,R., Bender,J.K., Fuchs,S., Schoerner,C., Rabsch,W., Lang,W., Jantsch,J. ( 2017 ) Comparative whole genome analysis of three consecutive Salmonella diarizonae isolates Int J Med Microbiol 307 (8) :542-551.

http://www.ncbi.nlm.nih.gov/pubmed/28939438
2017 Aurass,P., Duvel,J., Karste,S., Nübel,U., Rabsch,W., Flieger,A. ( 2017 ) glnA truncation in Salmonella enterica results in a small colony variant phenotype, attenuated host cell entry, and reduced expression of flagellin and SPI-1 associated effector genes Appl Environ Microbiol

http://www.ncbi.nlm.nih.gov/pubmed/29150501
2017 Dößelmann,B., Willmann,M., Steglich,M., Bunk,B., Nübel,U., Peters,S., Neher,R.A. ( 2017 ) Rapid and consistent evolution of colistin resistance in extensively drug-resistant Pseudomonas aeruginosa during morbidostat culture Antimicrobial Agents and Chemotherapy 61 :e00043-17.

2017 Steglich,M., Nübel,U. ( 2017 ) The challenge of detecting indels in bacterial genomes from short-read sequencing data J. Biotechnol. 250 :11-15.

2017 Nagel,S., Pommerenke,C., Meyer,C., Kaufmann,M., MacLeod,R.A.F., Drexler,H.G. ( 2017 ) Identification of a tumor suppressor network in T-cell leukemia Leuk Lymphoma 58 (9) :2196-2207.

https://www.ncbi.nlm.nih.gov/pubmed/28142295
2017 AitGhezali,L., Arbabian,A., Roudot,H., Brouland,J.P., Baran-Marszak,F., Salvaris,E., Boyd,A., Drexler,H.G., Enyedi,A., Letestu,R., Varin-Blank,N., Papp,B. ( 2017 ) Induction of endoplasmic reticulum calcium pump expression during early leukemic B cell differentiation J Exp Clin Cancer Res 36 (1) :87.

https://www.ncbi.nlm.nih.gov/pubmed/28651627
2017 Nagel,S., Pommerenke,C., Meyer,C., Kaufmann,M., MacLeod,R.A.F., Drexler,H.G. ( 2017 ) NKL homeobox gene MSX1 acts like a tumor suppressor in NK-cell leukemia Oncotarget 8 (40) :66815-66832.

https://www.ncbi.nlm.nih.gov/pubmed/28977998
2017 Jawhar,M., Naumann,N., Knut,M., Score,J., Ghazzawi,M., Schneider,B., Kreuzer,K.A., Hallek,M., Drexler,H.G., Chacko,J., Wallis,L., Fabarius,A., Metzgeroth,G., Hofmann,W.K., Chase,A., Tapper,W., Reiter,A., Cross,N.C.P. ( 2017 ) Cytogenetically cryptic ZMYM2-FLT3 and DIAPH1-PDGFRB gene fusions in myeloid neoplasms with eosinophilia Leukemia 31 (10) :2271-2273.

https://www.ncbi.nlm.nih.gov/pubmed/28751768
2017 Ehrentraut,S., Nagel,S., Pommerenke,C., Dirks,W.G., Quentmeier,H., Kaufmann,M., Meyer,C., Zaborski,M., Geffers,R., Fujiwara,H., Drexler,H.G., MacLeod,R.A.F. ( 2017 ) Peripheral T-cell lymphoma cell line T8ML-1 highlights conspicuous targeting of PVRL2 by t(14;19)(q11.2;q13.3) Haematologica 102 (9) :e356-e359.

https://www.ncbi.nlm.nih.gov/pubmed/28659334
2017 Daniele,G., Simonetti,G., Fusilli,C., Iacobucci,I., Lonoce,A., Palazzo,A., Lomiento,M., Mammoli,F., Marsano,R.M., Marasco,E., Mantovani,V., Quentmeier,H., Drexler,H.G., Ding,J., Palumbo,O., Carella,M., Nadarajah,N., Perricone,M., Ottaviani,E., Baldazzi,C., Testoni,N., Papayannidis,C., Ferrari,S., Mazza,T., Martinelli,G., Storlazzi,C.T. ( 2017 ) Epigenetically induced ectopic expression of UNCX impairs the proliferation and differentiation of myeloid cells Haematologica 102 (7) :1204-1214.

https://www.ncbi.nlm.nih.gov/pubmed/28411256
2017 Nagel,S., Pommerenke,C., Scherr,M., Meyer,C., Kaufmann,M., Battmer,K., MacLeod,R.A., Drexler,H.G. ( 2017 ) NKL homeobox gene activities in hematopoietic stem cells, T-cell development and T-cell leukemia PLoS One 12 (2) :e0171164.

https://www.ncbi.nlm.nih.gov/pubmed/28151996
2017 Drexler,H.G., Dirks,W.G., MacLeod,R.A., Uphoff,C.C. ( 2017 ) False and mycoplasma-contaminated leukemia-lymphoma cell lines: time for a reappraisal Int J Cancer 140 (5) :1209-1214.

https://www.ncbi.nlm.nih.gov/pubmed/27870004
2017 Palau,A., Mallo,M., Palomo,L., Rodriguez-Hernandez,I., Diesch,J., Campos,D., Granada,I., Junca,J., Drexler,H.G., Sole,F., Buschbeck,M. ( 2017 ) Immunophenotypic, cytogenetic, and mutational characterization of cell lines derived from myelodysplastic syndrome patients after progression to acute myeloid leukemia Genes Chromosomes Cancer 56 (3) :243-252.

https://www.ncbi.nlm.nih.gov/pubmed/27750403
2017 MacLeod,R.A., Kaufmann,M.E., Drexler,H.G. ( 2017 ) Cytogenetic Harvesting of Cancer Cells and Cell Lines Methods Mol Biol 1541 :43-58.

https://www.ncbi.nlm.nih.gov/pubmed/27910013
2016 Foesel,B.U., Geppert,A., Rohde,M., Overmann,J. ( 2016 ) Parviterribacter kavangonensis gen. nov., sp. nov. and Parviterribacter multiflagellatus sp. nov., novel members of Parviterribacteraceae fam. nov. within the order Solirubrobacterales, and emended descriptions of the classes Thermoleophilia and Rubrobacteria and their orders and families International Journal of Systematic and Evolutionary Microbiology 66 (2) :652-665.

http://ijs.microbiologyresearch.org/content/journal/ijsem/10.1099/ijsem.0.000770
2016 Foesel,B.U., Mayer,S., Luckner,M., Wanner,G., Rohde,M., Overmann,J. ( 2016 ) Occallatibacter riparius gen. nov., sp. nov. and Occallatibacter savannae sp. nov., acidobacteria isolated from Namibian soils, and emended description of the family Acidobacteriaceae International Journal of Systematic and Evolutionary Microbiology 66 (1) :219-229.

http://ijs.microbiologyresearch.org/content/journal/ijsem/10.1099/ijsem.0.000700
2016 Huber,K.J., Geppert,A.M., Wanner,G., Fosel,B.U., Wust,P.K., Overmann,J. ( 2016 ) Vicinamibacter silvestris - The first representative of the globally widespread subdivision 6 Acidobacteria isolated from subtropical savannah soil Int J Syst Evol Microbiol

2016 Doijad,S., Imirzalioglu,C., Yao,Y., Pati,N.B., Falgenhauer,L., Hain,T., Foesel,B.U., Abt,B., Overmann,J., Mirambo,M.M., Mshana,S.E., Chakraborty,T. ( 2016 ) Enterobacter bugandensis sp. nov., isolated from neonatal blood International Journal of Systematic and Evolutionary Microbiology 66 (2) :968-974.

http://ijs.microbiologyresearch.org/content/journal/ijsem/10.1099/ijsem.0.000821
2016 Lagkouvardos,I., Pukall,R., Abt,B., Foesel,B.U., Meier-Kolthoff,J.P., Kumar,N., Bresciani,A., Martínez,I., Just,S., Ziegler,C., Brugiroux,S., Garzetti,D., Wenning,M., Bui,T.P.N., Wang,J., Hugenholtz,F., Plugge,C.M., Peterson,D.A., Hornef,M.W., Baines,J.F., Smidt,H., Walter,J., Kristiansen,K., Nielsen,H.B., Haller,D., Overmann,J., Stecher,B., Clavel,T. ( 2016 ) The Mouse Intestinal Bacterial Collection (miBC) provides host-specific insight into cultured diversity and functional potential of the gut microbiota Nature Microbiology 1 :16131.

http://dx.doi.org/10.1038/nmicrobiol.2016.131
2016 Foesel,B.U., Mayer,S., Luckner,M., Wanner,G., Rohde,M., Overmann,J. ( 2016 ) Occallatibacter riparius gen. nov., sp. nov. and Occallatibacter savannae sp. nov., acidobacteria isolated from Namibian soils, and emended description of the family Acidobacteriaceae International Journal of Systematic and Evolutionary Microbiology 66 (1) :219-229.

http://ijs.microbiologyresearch.org/content/journal/ijsem/10.1099/ijsem.0.000700
2016 Foesel,B.U., Geppert,A., Rohde,M., Overmann,J. ( 2016 ) Parviterribacter kavangonensis gen. nov., sp. nov. and Parviterribacter multiflagellatus sp. nov., novel members of Parviterribacteraceae fam. nov. within the order Solirubrobacterales, and emended descriptions of the classes Thermoleophilia and Rubrobacteria and their orders and families International Journal of Systematic and Evolutionary Microbiology 66 (2) :652-665.

http://ijs.microbiologyresearch.org/content/journal/ijsem/10.1099/ijsem.0.000770
2016 Wüst,P.K., Foesel,B.U., Geppert,A., Huber,K.J., Luckner,M., Wanner,G., Overmann,J. ( 2016 ) Brevitalea aridisoli, B. deliciosa, and Arenimicrobium luteum, three novel species of Acidobacteria subdivision 4 (class Blastocatellia) isolated from Namibian savanna soil and description of the novel family Pyrinomonadaceae Int J Syst Evol Microbiol

2016 Gossner,M.M., Lewinsohn,T.M., Kahl,T., Grassein,F., Boch,S., Prati,D., Birkhofer,K., Renner,S.C., Sikorski,J., Wubet,T., Arndt,H., Baumgartner,V., Blaser,S., Bluthgen,N., Borschig,C., Buscot,F., Diekotter,T., Jorge,L.R., Jung,K., Keyel,A.C., Klein,A.M., Klemmer,S., Krauss,J., Lange,M., Muller,J., Overmann,J., Pasalic,E., Penone,C., Perovic,D.J., Purschke,O., Schall,P., Socher,S.A., Sonnemann,I., Tschapka,M., Tscharntke,T., Turke,M., Venter,P.C., Weiner,C.N., Werner,M., Wolters,V., Wurst,S., Westphal,C., Fischer,M., Weisser,W.W., Allan,E. ( 2016 ) Land-use intensification causes multitrophic homogenization of grassland communities Nature 540 (7632) :266-269.

https://www.ncbi.nlm.nih.gov/pubmed/27919075
2016 Zaburannyi,N., Bunk,B., Maier,J., Overmann,J., Muller,R. ( 2016 ) Genome Analysis of the Fruiting Body-Forming Myxobacterium Chondromyces crocatus Reveals High Potential for Natural Product Biosynthesis Appl Environ Microbiol 82 (6) :1945-57.

https://www.ncbi.nlm.nih.gov/pubmed/26773087
2016 Wynn,T., Overmann,K., Coolidge,F. ( 2016 ) The false dichotomy: a refutation of the Neandertal indistinguishability claim J Anthropol Sci 94 :201-21.

https://www.ncbi.nlm.nih.gov/pubmed/26708102
2016 Wust,P.K., Nacke,H., Kaiser,K., Marhan,S., Sikorski,J., Kandeler,E., Daniel,R., Overmann,J. ( 2016 ) Estimates of Soil Bacterial Ribosome Content and Diversity Are Significantly Affected by the Nucleic Acid Extraction Method Employed Appl Environ Microbiol 82 (9) :2595-607.

https://www.ncbi.nlm.nih.gov/pubmed/26896137
2016 Sohngen,C., Podstawka,A., Bunk,B., Gleim,D., Vetcininova,A., Reimer,L.C., Ebeling,C., Pendarovski,C., Overmann,J. ( 2016 ) BacDive--The Bacterial Diversity Metadatabase in 2016 Nucleic Acids Res 44 (D1) :D581-5.

https://www.ncbi.nlm.nih.gov/pubmed/26424852
2016 Foesel,B.U., Mayer,S., Luckner,M., Wanner,G., Rohde,M., Overmann,J. ( 2016 ) Occallatibacter riparius gen. nov., sp. nov. and Occallatibacter savannae sp. nov., acidobacteria isolated from Namibian soils, and emended description of the family Acidobacteriaceae Int J Syst Evol Microbiol 66 (1) :219-29.

https://www.ncbi.nlm.nih.gov/pubmed/26486590
2016 Foesel,B.U., Geppert,A., Rohde,M., Overmann,J. ( 2016 ) Parviterribacter kavangonensis gen. nov., sp. nov. and Parviterribacter multiflagellatus sp. nov., novel members of Parviterribacteraceae fam. nov. within the order Solirubrobacterales, and emended descriptions of the classes Thermoleophilia and Rubrobacteria and their orders and families Int J Syst Evol Microbiol 66 (2) :652-665.

https://www.ncbi.nlm.nih.gov/pubmed/26582010
2016 Doijad,S., Imirzalioglu,C., Yao,Y., Pati,N.B., Falgenhauer,L., Hain,T., Foesel,B.U., Abt,B., Overmann,J., Mirambo,M.M., Mshana,S.E., Chakraborty,T. ( 2016 ) Enterobacter bugandensis sp. nov., isolated from neonatal blood Int J Syst Evol Microbiol 66 (2) :968-974.

https://www.ncbi.nlm.nih.gov/pubmed/26637818
2016 Cota,I., Bunk,B., Sproer,C., Overmann,J., Konig,C., Casadesus,J. ( 2016 ) OxyR-dependent formation of DNA methylation patterns in OpvABOFF and OpvABON cell lineages of Salmonella enterica Nucleic Acids Res 44 (8) :3595-609.

https://www.ncbi.nlm.nih.gov/pubmed/26687718
2016 Wust,P.K., Foesel,B.U., Geppert,A., Huber,K.J., Luckner,M., Wanner,G., Overmann,J. ( 2016 ) Brevitalea aridisoli, B. deliciosa and Arenimicrobium luteum, three novel species of Acidobacteria subdivision 4 (class Blastocatellia) isolated from savanna soil and description of the novel family Pyrinomonadaceae Int J Syst Evol Microbiol 66 (9) :3355-3366.

https://www.ncbi.nlm.nih.gov/pubmed/27255677
2016 Thogersen,M.S., Delpin,M.W., Melchiorsen,J., Kilstrup,M., Mansson,M., Bunk,B., Sproer,C., Overmann,J., Nielsen,K.F., Gram,L. ( 2016 ) Production of the Bioactive Compounds Violacein and Indolmycin Is Conditional in a maeA Mutant of Pseudoalteromonas luteoviolacea S4054 Lacking the Malic Enzyme Front Microbiol 7 :1461.

https://www.ncbi.nlm.nih.gov/pubmed/27695447
2016 Soliveres,S., vanderPlas,F., Manning,P., Prati,D., Gossner,M.M., Renner,S.C., Alt,F., Arndt,H., Baumgartner,V., Binkenstein,J., Birkhofer,K., Blaser,S., Bluthgen,N., Boch,S., Bohm,S., Borschig,C., Buscot,F., Diekotter,T., Heinze,J., Holzel,N., Jung,K., Klaus,V.H., Kleinebecker,T., Klemmer,S., Krauss,J., Lange,M., Morris,E.K., Muller,J., Oelmann,Y., Overmann,J., Pasalic,E., Rillig,M.C., Schaefer,H.M., Schloter,M., Schmitt,B., Schoning,I., Schrumpf,M., Sikorski,J., Socher,S.A., Solly,E.F., Sonnemann,I., Sorkau,E., Steckel,J., Steffan-Dewenter,I., Stempfhuber,B., Tschapka,M., Turke,M., Venter,P.C., Weiner,C.N., Weisser,W.W., Werner,M., Westphal,C., Wilcke,W., Wolters,V., Wubet,T., Wurst,S., Fischer,M., Allan,E. ( 2016 ) Biodiversity at multiple trophic levels is needed for ecosystem multifunctionality Nature 536 (7617) :456-9.

https://www.ncbi.nlm.nih.gov/pubmed/27533038
2016 Soliveres,S., Manning,P., Prati,D., Gossner,M.M., Alt,F., Arndt,H., Baumgartner,V., Binkenstein,J., Birkhofer,K., Blaser,S., Bluthgen,N., Boch,S., Bohm,S., Borschig,C., Buscot,F., Diekotter,T., Heinze,J., Holzel,N., Jung,K., Klaus,V.H., Klein,A.M., Kleinebecker,T., Klemmer,S., Krauss,J., Lange,M., Morris,E.K., Muller,J., Oelmann,Y., Overmann,J., Pasalic,E., Renner,S.C., Rillig,M.C., Schaefer,H.M., Schloter,M., Schmitt,B., Schoning,I., Schrumpf,M., Sikorski,J., Socher,S.A., Solly,E.F., Sonnemann,I., Sorkau,E., Steckel,J., Steffan-Dewenter,I., Stempfhuber,B., Tschapka,M., Turke,M., Venter,P., Weiner,C.N., Weisser,W.W., Werner,M., Westphal,C., Wilcke,W., Wolters,V., Wubet,T., Wurst,S., Fischer,M., Allan,E. ( 2016 ) Locally rare species influence grassland ecosystem multifunctionality Philos Trans R Soc Lond B Biol Sci 371 (1694)

https://www.ncbi.nlm.nih.gov/pubmed/27114572
2016 Overmann,K.M., Florin,T.A. ( 2016 ) Nebulised hypertonic saline may be less effective than previously reported in reducing hospital length of stay and admission rate in acute bronchiolitis Evid Based Med 21 (4) :143.

https://www.ncbi.nlm.nih.gov/pubmed/27222561
2016 Nabhan,S., Bunk,B., Sproer,C., Liu,Z., Bryant,D.A., Overmann,J. ( 2016 ) Genome Sequence of Prosthecochloris sp. Strain CIB 2401 of the Phylum Chlorobi Genome Announc 4 (6)

https://www.ncbi.nlm.nih.gov/pubmed/27811102
2016 Lagkouvardos,I., Pukall,R., Abt,B., Foesel,B.U., Meier-Kolthoff,J.P., Kumar,N., Bresciani,A., Martinez,I., Just,S., Ziegler,C., Brugiroux,S., Garzetti,D., Wenning,M., Bui,T.P., Wang,J., Hugenholtz,F., Plugge,C.M., Peterson,D.A., Hornef,M.W., Baines,J.F., Smidt,H., Walter,J., Kristiansen,K., Nielsen,H.B., Haller,D., Overmann,J., Stecher,B., Clavel,T. ( 2016 ) The Mouse Intestinal Bacterial Collection (miBC) provides host-specific insight into cultured diversity and functional potential of the gut microbiota Nat Microbiol 1 (10) :16131.

https://www.ncbi.nlm.nih.gov/pubmed/27670113
2016 Lagkouvardos,I., Pukall,R., Abt,B., Foesel,B.U., Meier-Kolthoff,J.P., Kumar,N., Bresciani,A., Martinez,I., Just,S., Ziegler,C., Brugiroux,S., Garzetti,D., Wenning,M., Bui,T.P., Wang,J., Hugenholtz,F., Plugge,C.M., Peterson,D.A., Hornef,M.W., Baines,J.F., Smidt,H., Walter,J., Kristiansen,K., Nielsen,H.B., Haller,D., Overmann,J., Stecher,B., Clavel,T. ( 2016 ) Corrigendum: The Mouse Intestinal Bacterial Collection (miBC) provides host-specific insight into cultured diversity and functional potential of the gut microbiota Nat Microbiol 1 (11) :16219.

https://www.ncbi.nlm.nih.gov/pubmed/27748770
2016 Gossner,M.M., Lewinsohn,T.M., Kahl,T., Grassein,F., Boch,S., Prati,D., Birkhofer,K., Renner,S.C., Sikorski,J., Wubet,T., Arndt,H., Baumgartner,V., Blaser,S., Blüthgen,N., Börschig,C., Buscot,F., Diekötter,T., Jorge,L.R., Jung,K., Keyel,A.C., Klein,A.-M., Klemmer,S., Krauss,J., Lange,M., Müller,J., Overmann,J., Pasalic,E., Penone,C., Perovic,D.J., Purschke,O., Schall,P., Socher,S.A., Sonnemann,I., Tschapka,M., Tscharntke,T., Türke,M., Venter,P.C., Weiner,C.N., Werner,M., Wolters,V., Wurst,S., Westphal,C., Fischer,M., Weisser,W.W., Allan,E. ( 2016 ) Land-use intensification causes multitrophic homogenization of grassland communities Nature 540 (7632) :266-269.

http://dx.doi.org/10.1038/nature20575
2016 Kohn,T., Heuer,A., Jogler,M., Vollmers,J., Boedeker,C., Bunk,B., Rast,P., Borchert,D., Glockner,I., Freese,H.M., Klenk,H.P., Overmann,J., Kaster,A.K., Rohde,M., Wiegand,S., Jogler,C. ( 2016 ) Fuerstia marisgermanicae gen. nov., sp. nov., an Unusual Member of the Phylum Planctomycetes from the German Wadden Sea Front Microbiol 7 :2079.

https://www.ncbi.nlm.nih.gov/pubmed/28066393
2016 Sikorski,J. ( 2016 ) Schmelztiegel Bodenbakterien Biologie in unserer Zeit 46 (6) :358-365.

http://dx.doi.org/10.1002/biuz.201610607
2016 Jaenicke,S., Bunk,B., Wibberg,D., Sproer,C., Hersemann,L., Blom,J., Winkler,A., Schatschneider,S., Albaum,S.P., Kolliker,R., Goesmann,A., Puhler,A., Overmann,J., Vorholter,F.J. ( 2016 ) Complete Genome Sequence of the Barley Pathogen Xanthomonas translucens pv. translucens DSM 18974T (ATCC 19319T) Genome Announc 4 (6)

https://www.ncbi.nlm.nih.gov/pubmed/27908994
2016 Soliveres,S., vanderPlas,F., Manning,P., Prati,D., Gossner,M.M., Renner,S.C., Alt,F., Arndt,H., Baumgartner,V., Binkenstein,J., Birkhofer,K., Blaser,S., Blüthgen,N., Boch,S., Böhm,S., Börschig,C., Buscot,F., Diekötter,T., Heinze,J., Hölzel,N., Jung,K., Klaus,V.H., Kleinebecker,T., Klemmer,S., Krauss,J., Lange,M., Morris,E.K., Müller,J., Oelmann,Y., Overmann,J., Pasalic,E., Rillig,M.C., Schaefer,H.M., Schloter,M., Schmitt,B., Schöning,I., Schrumpf,M., Sikorski,J., Socher,S.A., Solly,E.F., Sonnemann,I., Sorkau,E., Steckel,J., Steffan-Dewenter,I., Stempfhuber,B., Tschapka,M., Türke,M., Venter,P.C., Weiner,C.N., Weisser,W.W., Werner,M., Westphal,C., Wilcke,W., Wolters,V., Wubet,T., Wurst,S., Fischer,M., Allan,E. ( 2016 ) Biodiversity at multiple trophic levels is needed for ecosystem multifunctionality Nature advance online publication

http://dx.doi.org/10.1038/nature19092
2016 Huber,K.J., Geppert,A.M., Wanner,G., Fosel,B.U., Wust,P.K., Overmann,J. ( 2016 ) The first representative of the globally widespread subdivision 6 Acidobacteria,Vicinamibacter silvestris gen. nov., sp. nov., isolated from subtropical savannah soil Int J Syst Evol Microbiol 66 (8) :2971-9.

https://www.ncbi.nlm.nih.gov/pubmed/27150379
2016 Zaburannyi,N., Bunk,B., Maier,J., Overmann,J., Muller,R. ( 2016 ) Genome Analysis of the Fruiting Body-Forming Myxobacterium Chondromyces crocatus Reveals High Potential for Natural Product Biosynthesis Appl Environ Microbiol 82 (6) :1945-57.

2016 Huang,S., Vieira,S., Bunk,B., Riedel,T., Sproer,C., Overmann,J. ( 2016 ) First Complete Genome Sequence of a Subdivision 6 Acidobacterium Strain Genome Announc 4 (3)

https://www.ncbi.nlm.nih.gov/pubmed/27231379
2016 Doijad,S., Imirzalioglu,C., Yao,Y., Pati,N.B., Falgenhauer,L., Hain,T., Foesel,B.U., Abt,B., Overmann,J., Mirambo,M.M., Mshana,S.E., Chakraborty,T. ( 2016 ) Enterobacter bugandensis sp. nov., isolated from neonatal blood International Journal of Systematic and Evolutionary Microbiology 66 (2) :968-974.

http://ijs.microbiologyresearch.org/content/journal/ijsem/10.1099/ijsem.0.000821
2016 Heinrich,D., Sturos,M., Smith,K., Vernau,W., Overmann,J. ( 2016 ) What is your diagnosis? Liver aspirate from a cat Vet Clin Pathol 45 (3) :513-4.

https://www.ncbi.nlm.nih.gov/pubmed/27378716
2016 Foesel,B.U., Geppert,A., Rohde,M., Overmann,J. ( 2016 ) Parviterribacter kavangonensis gen. nov., sp. nov. and Parviterribacter multiflagellatus sp. nov., novel members of Parviterribacteraceae fam. nov. within the order Solirubrobacterales, and emended descriptions of the classes Thermoleophilia and Rubrobacteria and their orders and families International Journal of Systematic and Evolutionary Microbiology 66 (2) :652-665.

http://ijs.microbiologyresearch.org/content/journal/ijsem/10.1099/ijsem.0.000770
2016 Ghosh,H., Doijad,S., Bunk,B., Falgenhauer,L., Yao,Y., Sproer,C., Gentil,K., Schmiedel,J., Imirzalioglu,C., Overmann,J., Chakraborty,T. ( 2016 ) Detection of translocatable units in a blaCTX-M-15 extended-spectrum beta-lactamase-producing ST131 Escherichia coli isolate using a hybrid sequencing approach Int J Antimicrob Agents 47 (3) :245-7.

https://www.ncbi.nlm.nih.gov/pubmed/26899414
2016 Foesel,B.U., Mayer,S., Luckner,M., Wanner,G., Rohde,M., Overmann,J. ( 2016 ) Occallatibacter riparius gen. nov., sp. nov. and Occallatibacter savannae sp. nov., acidobacteria isolated from Namibian soils, and emended description of the family Acidobacteriaceae International Journal of Systematic and Evolutionary Microbiology 66 (1) :219-229.

http://ijs.microbiologyresearch.org/content/journal/ijsem/10.1099/ijsem.0.000700
2016 Falgenhauer,L., Waezsada,S.E., Gwozdzinski,K., Ghosh,H., Doijad,S., Bunk,B., Sproer,C., Imirzalioglu,C., Seifert,H., Irrgang,A., Fischer,J., Guerra,B., Kasbohrer,A., Overmann,J., Goesmann,A., Chakraborty,T. ( 2016 ) Chromosomal Locations of mcr-1 and bla CTX-M-15 in Fluoroquinolone-Resistant Escherichia coli ST410 Emerg Infect Dis 22 (9) :1689-91.

https://www.ncbi.nlm.nih.gov/pubmed/27322919
2016 Lagkouvardos,I., Pukall,R., Abt,B., Foesel,B.U., Meier-Kolthoff,J.P., Kumar,N., Bresciani,A., Martínez,I., Just,S., Ziegler,C., Brugiroux,S., Garzetti,D., Wenning,M., Bui,T.P.N., Wang,J., Hugenholtz,F., Plugge,C.M., Peterson,D.A., Hornef,M.W., Baines,J.F., Smidt,H., Walter,J., Kristiansen,K., Nielsen,H.B., Haller,D., Overmann,J., Stecher,B., Clavel,T. ( 2016 ) The Mouse Intestinal Bacterial Collection (miBC) provides host-specific insight into cultured diversity and functional potential of the gut microbiota Nature Microbiology 1 :16131.

http://dx.doi.org/10.1038/nmicrobiol.2016.131
2016 DeAbrew,K.N., Kainkaryam,R.M., Shan,Y.K., Overmann,G.J., Settivari,R.S., Wang,X., Xu,J., Adams,R.L., Tiesman,J.P., Carney,E.W., Naciff,J.M., Daston,G.P. ( 2016 ) Grouping 34 Chemicals Based on Mode of Action Using Connectivity Mapping Toxicol Sci 151 (2) :447-61.

https://www.ncbi.nlm.nih.gov/pubmed/27026708
2016 Wüst,P.K., Foesel,B.U., Geppert,A., Huber,K.J., Luckner,M., Wanner,G., Overmann,J. ( 2016 ) Brevitalea aridisoli, B. deliciosa, and Arenimicrobium luteum, three novel species of Acidobacteria subdivision 4 (class Blastocatellia) isolated from Namibian savanna soil and description of the novel family Pyrinomonadaceae Int J Syst Evol Microbiol

2016 Crenn,K., Serpin,D., Lepleux,C., Overmann,J., Jeanthon,C. ( 2016 ) Silicimonas algicola gen. nov., sp. nov., a member of the Roseobacter clade isolated from the cell surface of the marine diatom Thalassiosira delicatula Int J Syst Evol Microbiol 66 (11) :4580-4588.

https://www.ncbi.nlm.nih.gov/pubmed/27498967
2016 Huang,S., Vieira,S., Bunk,B., Riedel,T., Spröer,C., Overmann,J. ( 2016 ) First Complete Genome Sequence of a Subdivision 6 Acidobacterium Strain Genome Announc 4 (3)

2016 Beims,H., Overmann,A., Fulde,M., Steinert,M., Bergmann,S. ( 2016 ) Isolation of Staphylococcus sciuri from horse skin infection Open Vet J 6 (3) :242-246.

https://www.ncbi.nlm.nih.gov/pubmed/28116248
2016 Cota,I., Bunk,B., Spröer,C., Overmann,J., Konig,C., Casadesus,J. ( 2016 ) OxyR-dependent formation of DNA methylation patterns in OpvABOFF and OpvABON cell lineages of Salmonella enterica Nucleic Acids Res 44 (8) :3595-609.

2016 Dumas,E., ChristinaBoritsch,E., Vandenbogaert,M., RodriguezdelaVega,R.C., Thiberge,J.M., Caro,V., Gaillard,J.L., Heym,B., Girard-Misguich,F., Brosch,R., Sapriel,G. ( 2016 ) Mycobacterial pan-genome analysis suggests important role of plasmids in the radiation of type VII secretion systems Genome Biol Evol 8 (2) :387-402.

http://www.ncbi.nlm.nih.gov/pubmed/26748339
2016 Falgenhauer,L., Waezsada,S.E., Gwozdzinski,K., Ghosh,H., Doijad,S., Bunk,B., Spröer,C., Imirzalioglu,C., Seifert,H., Irrgang,A., Fischer,J., Guerra,B., Kasbohrer,A., Overmann,J., Goesmann,A., Chakraborty,T. ( 2016 ) Chromosomal Locations of mcr-1 and blaCTX-M-15 in Fluoroquinolone-Resistant Escherichia coli ST410 Emerg Infect Dis 22 (9)

2016 Yurkov,A.M., Rohl,O., Pontes,A., Carvalho,C., Maldonado,C., Sampaio,J.P. ( 2016 ) Local climatic conditions constrain soil yeast diversity patterns in Mediterranean forests, woodlands and scrub biome FEMS Yeast Res 16 (1)

http://www.ncbi.nlm.nih.gov/pubmed/26568202
2016 Ghosh,H., Doijad,S., Bunk,B., Falgenhauer,L., Yao,Y., Sproer,C., Gentil,K., Schmiedel,J., Imirzalioglu,C., Overmann,J., Chakraborty,T. ( 2016 ) Detection of translocatable units in a blaCTX-M-15 extended-spectrum beta-lactamase-producing ST131 Escherichia coli isolate using a hybrid sequencing approach Int J Antimicrob Agents 47 (3) :245-7.

2016 Crenn,K., Serpin,D., Lepleux,C., Overmann,J., Jeanthon,C. ( 2016 ) Silicimonas algicola gen. nov., sp. nov., a novel member of the Roseobacter clade isolated from the cell surface of the marine diatom Thalassiosira delicatula Int J Syst Evol Microbiol

2016 Huber,K.J., Geppert,A.M., Wanner,G., Fosel,B.U., Wust,P.K., Overmann,J. ( 2016 ) Vicinamibacter silvestris - The first representative of the globally widespread subdivision 6 Acidobacteria isolated from subtropical savannah soil Int J Syst Evol Microbiol

2016 Wüst,P.K., Nacke,H., Kaiser,K., Marhan,S., Sikorski,J., Kandeler,E., Daniel,R., Overmann,J. ( 2016 ) Estimates of the bacterial ribosome content and diversity in soils are significantly affected by different nucleic acid extraction methods Applied and Environmental Microbiology doi: 10.1128/AEM.00019-16

http://aem.asm.org/content/early/2016/02/15/AEM.00019-16.abstract
2016 Ravindran,B.M. ( 2016 ) Transgenic Pest Resistance Devagiri Journal of Science 2 (1) :1-31.