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Publications of the DSMZ

Here you will find a complete list of all scientific publications.

Publications
2012 David,J., Garrity,G.M., Greuter,W., Hawksworth,D.L., Jahn,R., Kirk,P.M., McNeill,J., Michel,E., Knapp,S., Patterson,D.J., Tindall,B.J., Todd,J.A., van,T.J., Turland,N.J. ( 2012 ) Biological nomenclature terms for facilitating communication in the naming of organisms Zookeys 192 :67-72.

http://www.ncbi.nlm.nih.gov/pubmed/22639540
2012 Horneck,G., Moeller,R., Cadet,J., Douki,T., Mancinelli,R.L., Nicholson,W.L., Panitz,C., Rabbow,E., Rettberg,P., Spry,A., Stackebrandt,E., Vaishampayan,P., Venkateswaran,K.J. ( 2012 ) Resistance of bacterial endospores to outer space for planetary protection purposes-experiment PROTECT of the EXPOSE-E mission Astrobiology 12 (5) :445-456.

http://www.ncbi.nlm.nih.gov/pubmed/22680691
2012 Abt,B., Han,C., Scheuner,C., Lu,M., Lapidus,A., Nolan,M., Lucas,S., Hammon,N., Deshpande,S., Cheng,J.F., Tapia,R., Goodwin,L.A., Pitluck,S., Liolios,K., Pagani,I., Ivanova,N., Mavromatis,K., Mikhailova,N., Huntemann,M., Pati,A., Chen,A., Palaniappan,K., Land,M., Hauser,L., Brambilla,E.M., Rohde,M., Spring,S., Gronow,S., Göker,M., Woyke,T., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Kyrpides,N.C., Klenk,H.P., Detter,J.C. ( 2012 ) Complete genome sequence of the termite hindgut bacterium Spirochaeta coccoides type strain (SPN1(T)), reclassification in the genus Sphaerochaeta as Sphaerochaeta coccoides comb. nov. and emendations of the family Spirochaetaceae and the genus Sphaerochaeta Stand.Genomic Sci 6 (2) :194-209.

http://www.ncbi.nlm.nih.gov/pubmed/22768363
2012 Vaas,L.A., Marheine,M., Seufert,S., Schumacher,H.M., Kiesecker,H., Heine-Dobbernack,E. ( 2012 ) Impact of pr-10a overexpression on the cryopreservation success of Solanum tuberosum suspension cultures Plant Cell Rep 31 (6) :1061-1071.

http://www.ncbi.nlm.nih.gov/pubmed/22252543
2012 Anderson,I., Held,B., Lapidus,A., Nolan,M., Lucas,S., Tice,H., DelRio,T.G., Cheng,J.F., Han,C., Tapia,R., Goodwin,L.A., Pitluck,S., Liolios,K., Mavromatis,K., Pagani,I., Ivanova,N., Mikhailova,N., Pati,A., Chen,A., Palaniappan,K., Land,M., Brambilla,E.M., Rohde,M., Spring,S., Göker,M., Detter,J.C., Woyke,T., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Klenk,H.P., Kyrpides,N.C. ( 2012 ) Genome sequence of the homoacetogenic bacterium Holophaga foetida type strain (TMBS4T) Stand.Genomic Sci 6 (2) :174-184.

http://www.ncbi.nlm.nih.gov/pubmed/22768361
2012 Anderson,I., Saunders,E., Lapidus,A., Nolan,M., Lucas,S., Tice,H., DelRio,T.G., Cheng,J.F., Han,C., Tapia,R., Goodwin,L.A., Pitluck,S., Liolios,K., Mavromatis,K., Pagani,I., Ivanova,N., Mikhailova,N., Pati,A., Chen,A., Palaniappan,K., Land,M., Hauser,L., Jeffries,C.D., Chang,Y.J., Brambilla,E.M., Rohde,M., Spring,S., Göker,M., Detter,J.C., Woyke,T., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Kyrpides,N.C., Klenk,H.P. ( 2012 ) Complete genome sequence of the thermophilic sulfate-reducing ocean bacterium Thermodesulfatator indicus type strain (CIR29812T) Stand.Genomic Sci 6 (2) :155-164.

http://www.ncbi.nlm.nih.gov/pubmed/22768359
2012 Copeland,A., Zeytun,A., Yassawong,M., Nolan,M., Lucas,S., Hammon,N., Deshpande,S., Cheng,J.F., Han,C., Tapia,R., Goodwin,L.A., Pitluck,S., Mavromatis,K., Liolios,K., Pagani,I., Ivanova,N., Mikhailova,N., Pati,A., Chen,A., Palaniappan,K., Land,M., Hauser,L., Jeffries,C.D., Brambilla,E.M., Rohde,M., Sikorski,J., Pukall,R., Göker,M., Detter,J.C., Woyke,T., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Kyrpides,N.C., Klenk,H.P., Lapidus,A. ( 2012 ) Complete genome sequence of the orange-red pigmented, radioresistant Deinococcus proteolyticus type strain (MRPT) Stand.Genomic Sci 6 (2) :240-250.

http://www.ncbi.nlm.nih.gov/pubmed/22768367
2012 Copeland,A., Zhang,X., Misra,M., Lapidus,A., Nolan,M., Lucas,S., Deshpande,S., Cheng,J.F., Tapia,R., Goodwin,L.A., Pitluck,S., Liolios,K., Pagani,I., Ivanova,N., Mikhailova,N., Pati,A., Chen,A., Palaniappan,K., Land,M., Hauser,L., Pan,C., Jeffries,C.D., Detter,J.C., Brambilla,E.M., Rohde,M., Djao,O.D., Göker,M., Sikorski,J., Tindall,B.J., Woyke,T., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Kyrpides,N.C., Klenk,H.P., Mavromatis,K. ( 2012 ) Complete genome sequence of the aquatic bacterium Runella slithyformis type strain (LSU 4T) Stand.Genomic Sci 6 (2) :145-154.

http://www.ncbi.nlm.nih.gov/pubmed/22768358
2012 Göker,M., Saunders,E., Lapidus,A., Nolan,M., Lucas,S., Hammon,N., Deshpande,S., Cheng,J.F., Han,C., Tapia,R., Goodwin,L.A., Pitluck,S., Liolios,K., Mavromatis,K., Pagani,I., Ivanova,N., Mikhailova,N., Pati,A., Chen,A., Palaniappan,K., Land,M., Chang,Y.J., Jeffries,C.D., Brambilla,E.M., Rohde,M., Spring,S., Detter,J.C., Woyke,T., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Kyrpides,N.C., Klenk,H.P. ( 2012 ) Genome sequence of the moderately thermophilic, amino-acid-degrading and sulfur-reducing bacterium Thermovirga lienii type strain (Cas60314T) Stand.Genomic Sci 6 (2) :230-239.

http://www.ncbi.nlm.nih.gov/pubmed/22768366
2012 Hahnke,S., Tindall,B.J., Schumann,P., Sperling,M., Brinkhoff,T., Simon,M. ( 2012 ) Planktotalea frisia gen. nov., sp. nov., isolated from the southern North Sea Int J Syst Evol Microbiol 62 (Pt 7) :1619-1624.

http://www.ncbi.nlm.nih.gov/pubmed/21890723
2012 Huntemann,M., Teshima,H., Lapidus,A., Nolan,M., Lucas,S., Hammon,N., Deshpande,S., Cheng,J.F., Tapia,R., Goodwin,L.A., Pitluck,S., Liolios,K., Pagani,I., Ivanova,N., Mavromatis,K., Mikhailova,N., Pati,A., Chen,A., Palaniappan,K., Land,M., Hauser,L., Pan,C., Brambilla,E.M., Rohde,M., Spring,S., Göker,M., Detter,J.C., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Kyrpides,N.C., Klenk,H.P., Woyke,T. ( 2012 ) Complete genome sequence of the facultatively anaerobic, appendaged bacterium Muricauda ruestringensis type strain (B1T) Stand.Genomic Sci 6 (2) :185-193.

http://www.ncbi.nlm.nih.gov/pubmed/22768362
2012 Klenk,H.P., Held,B., Lucas,S., Lapidus,A., Copeland,A., Hammon,N., Pitluck,S., Goodwin,L.A., Han,C., Tapia,R., Brambilla,E.M., Pötter,G., Land,M., Ivanova,N., Rohde,M., Göker,M., Detter,J.C., Kyrpides,N.C., Woyke,T. ( 2012 ) Genome sequence of the soil bacterium Saccharomonospora azurea type strain (NA-128T) Stand.Genomic Sci 6 (2) :220-229.

http://www.ncbi.nlm.nih.gov/pubmed/22768365
2012 Menzel,W., Winter,S. ( 2012 ) Sequencing of the Tamus red mosaic virus genome: further evidence that it is a distinct species of the genus Potexvirus Virus Genes 44 (1) :120-123.

http://www.ncbi.nlm.nih.gov/pubmed/21881939
2012 Klenk,H.P., Lu,M., Lucas,S., Lapidus,A., Copeland,A., Pitluck,S., Goodwin,L.A., Han,C., Tapia,R., Brambilla,E.M., Pötter,G., Land,M., Ivanova,N., Rohde,M., Göker,M., Detter,J.C., Li,W.J., Kyrpides,N.C., Woyke,T. ( 2012 ) Genome sequence of the ocean sediment bacterium Saccharomonospora marina type strain (XMU15T) Stand.Genomic Sci 6 (2) :265-275.

http://www.ncbi.nlm.nih.gov/pubmed/22768369
2012 Jelkmann,W., Mikona,C., Turturo,C., Navarro,B., Rott,M.E., Menzel,W., Saldarelli,P., Minafra,A., Martelli,G.P. ( 2012 ) Molecular characterization and taxonomy of grapevine leafroll-associated virus 7 Arch Virol. 157 (2) :359-362.

http://www.ncbi.nlm.nih.gov/pubmed/22109709
2012 Mavromatis,K., Chertkov,O., Lapidus,A., Nolan,M., Lucas,S., Tice,H., DelRio,T.G., Cheng,J.F., Han,C., Tapia,R., Bruce,D., Goodwin,L.A., Pitluck,S., Huntemann,M., Liolios,K., Pagani,I., Ivanova,N., Mikhailova,N., Pati,A., Chen,A., Palaniappan,K., Land,M., Brambilla,E.M., Rohde,M., Spring,S., Göker,M., Detter,J.C., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Kyrpides,N.C., Klenk,H.P., Woyke,T. ( 2012 ) Permanent draft genome sequence of the gliding predator Saprospira grandis strain Sa g1 (= HR1) Stand.Genomic Sci 6 (2) :210-219.

http://www.ncbi.nlm.nih.gov/pubmed/22768364
2012 Abraham,A., Menzel,W., Vetten,H.J., Winter,S. ( 2012 ) Analysis of the tomato mild mottle virus genome indicates that it is the most divergent member of the genus Ipomovirus (family Potyviridae) Arch Virol. 157 (2) :353-357.

http://www.ncbi.nlm.nih.gov/pubmed/22080188
2012 Neupane,S., Finlay,R.D., Alstrom,S., Goodwin,L., Kyrpides,N.C., Lucas,S., Lapidus,A., Bruce,D., Pitluck,S., Peters,L., Ovchinnikova,G., Chertkov,O., Han,J., Han,C., Tapia,R., Detter,J.C., Land,M., Hauser,L., Cheng,J.F., Ivanova,N., Pagani,I., Klenk,H.P., Woyke,T., Hogberg,N. ( 2012 ) Complete genome sequence of Serratia plymuthica strain AS12 Stand.Genomic Sci 6 (2) :165-173.

http://www.ncbi.nlm.nih.gov/pubmed/22768360
2012 Stielow,J.B., Bratek,Z., Klenk,H.P., Winter,S., Menzel,W. ( 2012 ) A novel mitovirus from the hypogeous ectomycorrhizal fungus Tuber excavatum Arch Virol. 157 :787-790.

http://www.ncbi.nlm.nih.gov/pubmed/22286751
2012 Stieglmeier,M., Rettberg,P., Barczyk,S., Bohmeier,M., Pukall,R., Wirth,R., Moissl-Eichinger,C. ( 2012 ) Abundance and diversity of microbial inhabitants in European spacecraft-associated clean rooms Astrobiology 12 (6) :572-585.

http://www.ncbi.nlm.nih.gov/pubmed/22794299
2012 Menzel,W., Hamacher,J., Weissbrodt,S., Winter,S. ( 2012 ) Complete Nucleotide Sequence of the RNA 3 of Bacopa chlorosis virus and Production of Polyclonal Antibodies to a Recombinant Coat Protein Journal of Phytopathology 160 (3) :163-165.

http://dx.doi.org/10.1111/j.1439-0434.2011.01877.x
2012 Martelli,G.P., AbouGhanem-Sabanadzovic,N., Agranovsky,A.A., AlRwahnih,M., Dolja,V.V., Dovas,C.I., Fuchs,M., Gugerli,P., Hu,J.S., Jelkmann,W., Katis,N.I., Maliogka,V.I., Melzer,M.J., Menzel,W., Minafra,A., Rott,M.E., Rowhani,A., Sabanadzovic,S., Saldarelli,P. ( 2012 ) Taxonomic revision of the family Closteroviridae with special reference to the grapevine leafroll-associated members of the genus Ampleovirus and the putative species unassigned to the family Journal of Plant Pathology 94 :7-19.

http://dx.doi.org/10.4454/jpp.fa.2012.022
2012 Zhang,Y.J., Tang,S.K., Shi,R., Klenk,H.P., Chen,C., Yang,L.L., Zhou,Y., Li,W.J. ( 2012 ) Salinisphaera halophila sp. nov., a moderately halophilic bacterium isolated from brine of a salt well Int J Syst Evol Microbiol 62 (Pt 9) :2174-2179.

http://www.ncbi.nlm.nih.gov/pubmed/22058321
2012 Ochwo-Ssemakula,M., Hakiza,J.J., Adipala,E., Edema,R., Redinbaugh,M.G., Aritua,V., Winter,S. ( 2012 ) Characterization and distribution of a Potyvirus associated with passion fruit woodiness disease in Uganda Plant Dis. 96 :659-665.

2012 Setaro,S.D., Garnica,S., Herrera,P.I., Suárez,J.P., Göker,M. ( 2012 ) A clustering optimization strategy to estimate species richness of Sebacinales in the tropical Andes based on molecular sequences from distinct DNA regions Biodivers Conserv 21 (9) :2269-2285.

2012 Hamed,K., Menzel,W., Mohamed,M.E., Dafallah,G., Gadelseed,A.M.A., Winter,S. ( 2012 ) First Report of Shallot virus X in Onion in Sudan Plant Disease 96 (7) :1075-1075.

http://dx.doi.org/10.1094/PDIS-03-12-0253-PDN
2012 Krishnamurthi,S., Spring,S., AnilKumar,P., Mayilraj,S., Klenk,H.P., Suresh,K. ( 2012 ) Desulfotomaculum defluvii sp. nov., a sulfate-reducing bacterium isolated from the subsurface environment of a landfill Int J Syst Evol Microbiol

http://www.ncbi.nlm.nih.gov/pubmed/23159750
2012 Götz,M., Popovski,S., Kollenberg,M., Gorovits,R., Brown,J.K., Cicero,J.M., Czosnek,H., Winter,S., Ghanim,M. ( 2012 ) Implication of Bemisia tabaci heat shock protein 70 in Begomovirus-whitefly interactions J Virol 86 (24) :13241-52.

http://www.ncbi.nlm.nih.gov/pubmed/23015709
2012 Naether,A., Foesel,B.U., Naegele,V., Wüst,P.K., Weinert,J., Bonkowski,M., Alt,F., Oelmann,Y., Polle,A., Lohaus,G., Gockel,S., Hemp,A., Kalko,E.K., Linsenmair,K.E., Pfeiffer,S., Renner,S., Schöning,I., Weisser,W.W., Wells,K., Fischer,M., Overmann,J., Friedrich,M.W. ( 2012 ) Environmental Factors Affect Acidobacterial Communities below the Subgroup Level in Grassland and Forest Soils Appl Environ Microbiol 78 (20) :7398-7406.

http://www.ncbi.nlm.nih.gov/pubmed/22885760
2011 Nagel,S., Venturini,L., Meyer,C., Kaufmann,M., Scherr,M., Drexler,H.G., MacLeod,R.A.F. ( 2011 ) Transcriptional deregulation of oncogenic myocyte enhancer factor 2C in T-cell acute lymphoblastic leukemia Leuk.Lymphoma 52 (2) :290-297.

http://www.ncbi.nlm.nih.gov/pubmed/21261500
2011 Quentmeier,H., Eberth,S., Romani,J., Zaborski,M., Drexler,H.G. ( 2011 ) BCR-ABL1-independent PI3Kinase activation causing imatinib-resistance J Hematol.Oncol 4 (1) :6.

http://www.ncbi.nlm.nih.gov/pubmed/21299849
2011 Giesen,U., Langner,F., Mielke,C., Mosconi,M., Dirks,W.G. ( 2011 ) Online imaging of initial DNA damages at the PTB microbeam Radiat.Prot.Dosimetry 143 (2-4) :349-352.

http://www.ncbi.nlm.nih.gov/pubmed/21149293
2011 Bödör,C., O'Riain,C., Wrench,D., Matthews,J., Iyengar,S., Tayyib,H., Calaminici,M., Clear,A., Iqbal,S., Quentmeier,H., Drexler,H.G., Montoto,S., Lister,A.T., Gribben,J.G., Matolcsy,A., Fitzgibbon,J. ( 2011 ) EZH2 Y641 mutations in follicular lymphoma Leukemia 25 (4) :726-729.

http://www.ncbi.nlm.nih.gov/pubmed/21233829
2011 Nagel,S., Drexler,H.G. ( 2011 ) Expression analysis of homeobox genes in leukemia/lymphoma cell lines Methods Mol Biol 731 :371-380.

http://www.ncbi.nlm.nih.gov/pubmed/21516422
2011 Schneider,B., Drexler,H.G., MacLeod,R.A.F. ( 2011 ) Molecular Breakpoint Analysis of Chromosome Translocations in Cancer Cell Lines by Long Distance Inverse-PCR Methods Mol Biol 731 :321-332.

http://www.ncbi.nlm.nih.gov/pubmed/21516418
2011 Drexler,H.G. ( 2011 ) Establishment and culture of leukemia-lymphoma cell lines Methods Mol Biol 731 :181-200.

http://www.ncbi.nlm.nih.gov/pubmed/21516408
2011 Uphoff,C.C., Drexler,H.G. ( 2011 ) Elimination of mycoplasmas from infected cell lines using antibiotics Methods Mol Biol 731 :105-114.

http://www.ncbi.nlm.nih.gov/pubmed/21516401
2011 Uphoff,C.C., Drexler,H.G. ( 2011 ) Detecting Mycoplasma contamination in cell cultures by polymerase chain reaction Methods Mol Biol 731 :93-103.

http://www.ncbi.nlm.nih.gov/pubmed/21516400
2011 MacLeod,R.A.F., Kaufmann,M., Drexler,H.G. ( 2011 ) Cytogenetic analysis of cancer cell lines Methods Mol Biol 731 :57-78.

http://www.ncbi.nlm.nih.gov/pubmed/21516398
2011 Dirks,W.G., Drexler,H.G. ( 2011 ) Online Verification of Human Cell Line Identity by STR DNA Typing Methods Mol Biol 731 :45-55.

http://www.ncbi.nlm.nih.gov/pubmed/21516397
2011 Nagel,S., Venturini,L., Przybylski,G.K., Grabarczyk,P., Schneider,B., Meyer,C., Kaufmann,M., Schmidt,C.A., Scherr,M., Drexler,H.G., MacLeod,R.A.F. ( 2011 ) Activation of Paired-homeobox gene PITX1 by del(5)(q31) in T-cell acute lymphoblastic leukemia Leuk.Lymphoma 52 (7) :1348-1359.

http://www.ncbi.nlm.nih.gov/pubmed/21425961
2011 Mosconi,M., Giesen,U., Langner,F., Mielke,C., Dalla,R.,I, Dirks,W.G. ( 2011 ) 53BP1 and MDC1 foci formation in HT-1080 cells for low- and high-LET microbeam irradiations Radiat.Environ Biophys 50 (3) :345-352.

http://www.ncbi.nlm.nih.gov/pubmed/21559952
2011 Nagel,S., Schneider,B., Rosenwald,A., Meyer,C., Kaufmann,M., Drexler,H.G., MacLeod,R.A.F. ( 2011 ) t(4;8)(q27;q24) in Hodgkin lymphoma cells targets phosphodiesterase PDE5A and homeobox gene ZHX2 Genes Chromosomes Cancer 50 (12) :996-1009.

http://www.ncbi.nlm.nih.gov/pubmed/21987443
2011 Kakadia,P.M., Tizazu,B., Mellert,G., Harbott,J., Röttgers,S., Quentmeier,H., Spiekermann,K., Bohlander,S.K. ( 2011 ) A novel ABL1 fusion to the SH2 containing inositol phosphatase-1 (SHIP1) in acute lymphoblastic leukemia (ALL) Leukemia 25 (10) :1645-1649.

http://www.ncbi.nlm.nih.gov/pubmed/21625237
2011 Chen,S., Nagel,S., Schneider,B., Kaufmann,M., Meyer,C., Zaborski,M., Kees,U.R., Drexler,H.G., MacLeod,R.A.F. ( 2011 ) Novel non-TCR chromosome translocations t(3;11)(q25;p13) and t(X;11)(q25;p13) activating LMO2 by juxtaposition with MBNL1 and STAG2 Leukemia 25 (10) :1632-1635.

http://www.ncbi.nlm.nih.gov/pubmed/21647158
2011 Berg,E., Christensen,M.O., Dalla,R.,I, Wannagat,E., Janicke,R.U., Rosner,L.M., Dirks,W.G., Boege,F., Mielke,C. ( 2011 ) XRCC4 controls nuclear import and distribution of Ligase IV and exchanges faster at damaged DNA in complex with Ligase IV DNA Repair (Amst) 10 (12) :1232-1242.

http://www.ncbi.nlm.nih.gov/pubmed/21982441
2011 Wang,Q., Qiu,H., Jiang,H., Wu,L., Dong,S., Pan,J., Wang,W., Ping,N., Xia,J., Sun,A., Wu,D., Xue,Y., Drexler,H.G., MacLeod,R.A.F., Chen,S. ( 2011 ) Mutation of PHF6 is associated with mutations of NOTCH1, JAK1 and rearrangement of SET-NUP214 in T-cell acute lymphoblastic leukemia Haematologica 96 (12) :1808-1814.

http://www.ncbi.nlm.nih.gov/pubmed/21880637
2011 Chim,C.S., Wan,T.S., Wong,K.Y., Fung,T.K., Drexler,H.G., Wong,K.F. ( 2011 ) Methylation of miR-34a, miR-34b/c, miR-124-1 and miR-203 in Ph-negative myeloproliferative neoplasms J Transl.Med 9 (1) :197.

http://www.ncbi.nlm.nih.gov/pubmed/22082000
2011 Hütz,A., Schubert,K., Overmann,J. ( 2011 ) Thalassospira sp. isolated from the oligotrophic Eastern Mediterranean Sea exhibits chemotaxis toward inorganic phosphate during starvation Appl Environ Microbiol 77 (13) :4412-4421.

http://www.ncbi.nlm.nih.gov/pubmed/21602377
2011 Tomasch,J., Gohl,R., Bunk,B., Diez,M.S., Wagner-Döbler,I. ( 2011 ) Transcriptional response of the photoheterotrophic marine bacterium Dinoroseobacter shibae to changing light regimes ISME J 5 :1957-1968.

http://www.ncbi.nlm.nih.gov/pubmed/21654848
2011 Garbe,J., Bunk,B., Rohde,M., Schobert,M. ( 2011 ) Sequencing and Characterization of Pseudomonas aeruginosa phage JG004 BMC Microbiol 11 :102.

http://www.ncbi.nlm.nih.gov/pubmed/21569567
2011 Bartsch,A., Bunk,B., Haddad,I., Klein,J., Münch,R., Johl,T., Karst,U., Jänsch,L., Jahn,D., Retter,I. ( 2011 ) GeneReporter--sequence-based document retrieval and annotation Bioinformatics 27 (7) :1034-1035.

http://www.ncbi.nlm.nih.gov/pubmed/21310745
2011 Wüst,P.K., Horn,M.A., Drake,H.L. ( 2011 ) Clostridiaceae and Enterobacteriaceae as active fermenters in earthworm gut content ISME J 5 (1) :92-106.

http://www.ncbi.nlm.nih.gov/pubmed/20613788
2011 Overmann,J. ( 2011 ) Leben unter extremer Lichtlimitierung. 39 :51-62.

2011 Damsté,J.S.S., ijpstra,W.I., Hopmans,E.C., Weijers,J.W., Foesel,B.U., Overmann,J., Dedysh,S.N. ( 2011 ) 13,16-Dimethyl octacosanedioic acid (iso-diabolic acid), a common membrane-spanning lipid of Acidobacteria subdivisions 1 and 3 Appl Environ Microbiol 77 (12) :4147-4154.

http://www.ncbi.nlm.nih.gov/pubmed/21515715
2011 Müller,J., Overmann,J. ( 2011 ) Close interspecies interactions between prokaryotes from sulfureous environments Front Microbiol 2 :146.

http://www.ncbi.nlm.nih.gov/pubmed/21779277
2011 Schmidt,O., Wüst,P.K., Hellmuth,S., Borst,K., Horn,M.A., Drake,H.L. ( 2011 ) Novel [NiFe]- and [FeFe]-hydrogenase gene transcripts indicative of active facultative aerobes and obligate anaerobes in earthworm gut contents Appl Environ Microbiol 77 (17) :5842-5850.

http://www.ncbi.nlm.nih.gov/pubmed/21784904
2011 Jogler,M., Siemens,H., Chen,H., Bunk,B., Sikorski,J., Overmann,J. ( 2011 ) Identification and targeted cultivation of abundant novel freshwater sphingomonads and analysis of their population substructure Appl Environ Microbiol 77 (20) :7355-7364.

http://www.ncbi.nlm.nih.gov/pubmed/21873487
2011 Eppinger,M., Bunk,B., Johns,M.A., Edirisinghe,J.N., Kutumbaka,K.K., Koenig,S.S., Creasy,H.H., Rosovitz,M.J., Riley,D.R., Daugherty,S., Martin,M., Elbourne,L.D., Paulsen,I., Biedendieck,R., Braun,C., Grayburn,S., Dhingra,S., Lukyanchuk,V., Ball,B., Ul-Qamar,R., Seibel,J., Bremer,E., Jahn,D., Ravel,J., Vary,P.S. ( 2011 ) Genome sequences of the biotechnologically important Bacillus megaterium strains QM B1551 and DSM319 J Bacteriol 193 (16) :4199-4213.

http://www.ncbi.nlm.nih.gov/pubmed/21705586
2011 Rohde,C., Sikorski,J. ( 2011 ) Bakteriophagen - Vielfalt, Anwendung und ihre Bedeutung für die Wissenschaft vom Leben Nat.Rundschau 64 (1) :5-14.

2011 Panday,D., Schumann,P., Das,S.K. ( 2011 ) Rhizobium pusense sp. nov., isolated from the rhizosphere of chickpea (Cicer arietinum L.) Int J Syst Evol Microbiol 61 (Pt 11) :2632-2639.

http://www.ncbi.nlm.nih.gov/pubmed/21148676
2011 Rusznyak,A., Toth,E.M., Schumann,P., Sproer,C., Makk,J., Szabo,G., Vladar,P., Marialigeti,K., Borsodi,A.K. ( 2011 ) Cellulomonas phragmiteti sp. nov., a cellulolytic bacterium isolated from reed (Phragmites australis) periphyton in a shallow soda pond Int J Syst Evol Microbiol 61 (Pt 7) :1662-1666.

http://www.ncbi.nlm.nih.gov/pubmed/20729313
2011 Eder,W., Wanner,G., Ludwig,W., Busse,H.J., Ziemke-Kägeler,F., Lang,E. ( 2011 ) Description of Undibacterium oligocarboniphilum sp. nov., isolated from purified water, and Undibacterium pigrum strain CCUG 49012 as the type strain of Undibacterium parvum sp. nov., and emended descriptions of the genus Undibacterium and the species Undibacterium pigrum International Journal of Systematic and Evolutionary Microbiology 61 (Pt 2) :384-391.

http://www.ncbi.nlm.nih.gov/pubmed/20305060
2011 Figueras,M.J., Alperi,A., Beaz-Hidalgo,R., Stackebrandt,E., Brambilla,E., Monera,A., Martinez-Murcia,A.J. ( 2011 ) Aeromonas rivuli sp. nov., isolated from the upstream region of a karst water rivulet International Journal of Systematic and Evolutionary Microbiology 61 (Pt 2) :242-248.

http://www.ncbi.nlm.nih.gov/pubmed/20207806
2011 Moser,B.D., Klenk,H.P., Schumann,P., Pötter,G., Lasker,B.A., Steigerwalt,A.G., Hinrikson,H.P., Brown,J.M. ( 2011 ) Nocardia niwae sp. nov., isolated from human pulmonary sources International Journal of Systematic and Evolutionary Microbiology 61 (Pt 2) :438-442.

http://www.ncbi.nlm.nih.gov/pubmed/20348315
2011 Wolfgang,W.J., Carpenter,A.N., Cole,J.A., Gronow,S., Habura,A., Jose,S., Nazarian,E.J., Kohlerschmidt,D.J., Limberger,R., Schoonmaker-Bopp,D., Spröer,C., Musser,K.A. ( 2011 ) Neisseria wadsworthii sp. nov. and Neisseria shayeganii sp. nov., isolated from clinical specimens International Journal of Systematic and Evolutionary Microbiology 61 (Pt 1) :91-98.

http://www.ncbi.nlm.nih.gov/pubmed/20173010
2011 Tóth,E.M., Kéki,Z., Makk,J., Homonnay,Z.G., Márialigeti,K., Schumann,P. ( 2011 ) Nocardioides hungaricus sp. nov., isolated from a drinking water supply system Int J Syst Evol Microbiol 61 (Pt 3) :549-553.

http://www.ncbi.nlm.nih.gov/pubmed/20382790
2011 Yassin,A.F., Hupfer,H., Siering,C., Klenk,H.P., Schumann,P. ( 2011 ) Auritidibacter ignavus gen. nov., sp. nov., of the family Micrococcaceae isolated from an ear swab of a man with otitis externa, transfer of the members of the family Yaniellaceae Li et al. 2008 to the family Micrococcaceae and emended description of the suborder Micrococcineae International Journal of Systematic and Evolutionary Microbiology 61 (Pt 2) :223-230.

http://www.ncbi.nlm.nih.gov/pubmed/20190019
2011 Zhang,C.M., Huang,X.W., Pan,W.Z., Zhang,J., Wei,K.B., Klenk,H.P., Tang,S.K., Li,W.J., Zhang,K.Q. ( 2011 ) Anoxybacillus tengchongensis sp. nov. and Anoxybacillus eryuanensis sp. nov., facultatively anaerobic, alkalitolerant bacteria from hot springs International Journal of Systematic and Evolutionary Microbiology 61 (Pt 1) :118-122.

http://www.ncbi.nlm.nih.gov/pubmed/20173008
2011 Dhanjal,S., Ruckmani,A., Cameotra,S.S., Pukall,R., Klenk,H.P., Mayilraj,S. ( 2011 ) Yaniella fodinae sp. nov., isolated from a coal mine Int J Syst Evol Microbiol 61 (Pt 3) :535-539.

http://www.ncbi.nlm.nih.gov/pubmed/20382793
2011 Mwirichia,R., Cousin,S., Muigai,A.W., Boga,H.I., Stackebrandt,E. ( 2011 ) Bacterial diversity in the haloalkaline Lake Elmenteita, Kenya Curr Microbiol 62 (1) :209-221.

http://www.ncbi.nlm.nih.gov/pubmed/20582590
2011 Rohde,C., Sikorski,J. ( 2011 ) Bakteriophagen - Vielfalt, Anwendung und ihre Bedeutung für die Wissenschaft vom Leben Nat.Rundschau 64 (1) :5-14.

2011 Stackebrandt,E. ( 2011 ) Significant differences exist between the type strain of a newly described bacterial species and a non-type strain included in the original or other scientific publications Arch Microbiol 193 (3) :155-156.

http://www.ncbi.nlm.nih.gov/pubmed/21234747
2011 Schauer,S., Kämpfer,P., Wellner,S., Spröer,C., Kutschera,U. ( 2011 ) Methylobacterium marchantiae sp. nov., a pink-pigmented, facultatively methylotrophic bacterium isolated from the thallus of a liverwort Int J Syst Evol Microbiol 61 (Pt 4) :870-876.

http://www.ncbi.nlm.nih.gov/pubmed/20495043
2011 Stielow,B., Bratek,Z., Orczan,A.K., Rudnoy,S., Hensel,G., Hoffmann,P., Klenk,H.P., Göker,M. ( 2011 ) Species delimitation in taxonomically difficult fungi: the case of Hymenogaster PLoS ONE 6 (1) :e15614.

http://www.ncbi.nlm.nih.gov/pubmed/21311589
2011 Sturm,G., Jacobs,J., Spröer,C., Schumann,P., Gescher,J. ( 2011 ) Leucobacter chromiiresistens sp. nov., a chromate-resistant strain Int J Syst Evol Microbiol 61 (Pt 4) :956-960.

http://www.ncbi.nlm.nih.gov/pubmed/20511468
2011 Rohde,C., Sikorski,J. ( 2011 ) Bakteriophagen - Vielfalt, Anwendung und ihre Bedeutung für die Wissenschaft vom Leben Nat.Rundschau 64 (1) :5-14.

2011 Makk,J., Homonnay,Z.G., Keki,Z., Lejtovicz,Z., Marialigeti,K., Spröer,C., Schumann,P., Toth,E.M. ( 2011 ) Tahibacter aquaticus gen. nov., sp. nov., a new gammaproteobacterium isolated from the drinking water supply system of Budapest (Hungary) Syst Appl Microbiol 34 (2) :110-115.

http://www.ncbi.nlm.nih.gov/pubmed/21194866
2011 Chen,Y.G., Zhang,L., Zhang,Y.Q., He,J.W., Klenk,H.P., Tang,S.K., Zhang,Y.X., Li,W.J. ( 2011 ) Bacillus nanhaiensis sp. nov., isolated from an oyster Int J Syst Evol Microbiol 61 (Pt 4) :888-893.

http://www.ncbi.nlm.nih.gov/pubmed/20495032
2011 Hahn,M.W., Lang,E., Brandt,U., Spröer,C. ( 2011 ) Polynucleobacter acidiphobus sp. nov., a representative of an abundant group of planktonic freshwater bacteria Int J Syst Evol Microbiol 61 (Pt 4) :788-794.

http://www.ncbi.nlm.nih.gov/pubmed/20435747
2011 Hahn,M.W., Lang,E., Tarao,M., Brandt,U. ( 2011 ) Polynucleobacter rarus sp. nov., a free-living planktonic bacterium isolated from an acidic lake Int J Syst Evol Microbiol 61 (Pt 4) :781-787.

http://www.ncbi.nlm.nih.gov/pubmed/20435748
2011 Wang,Y., Tang,S.K., Li,Z., Lou,K., Mao,P.H., Jin,X., Klenk,H.P., Zhang,L.X., Li,W.J. ( 2011 ) Myceligenerans halotolerans sp. nov., an actinomycete isolated from a salt lake, and emended description of the genus Myceligenerans Int J Syst Evol Microbiol 61 (Pt 4) :974-978.

http://www.ncbi.nlm.nih.gov/pubmed/20511461
2011 Abt,B., Teshima,H., Lucas,S., Lapidus,A., DelRio,T.G., Nolan,M., Tice,H., Cheng,J.F., Pitluck,S., Liolios,K., Pagani,I., Ivanova,N., Mavromatis,K., Pati,A., Tapia,R., Han,C., Goodwin,L., Chen,A., Palaniappan,K., Land,M., Hauser,L., Chang,Y.J., Jeffries,C.D., Rohde,M., Göker,M., Tindall,B.J., Detter,J.C., Woyke,T., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Klenk,H.P., Kyrpides,N.C. ( 2011 ) Complete genome sequence of Leadbetterella byssophila type strain (4M15) Stand.Genomic Sci 4 (1) :2-12.

http://www.ncbi.nlm.nih.gov/pubmed/21475582
2011 Abt,B., Lu,M., Misra,M., Han,C., Nolan,M., Lucas,S., Hammon,N., Deshpande,S., Cheng,J.F., Tapia,R., Goodwin,L., Pitluck,S., Liolios,K., Pagani,I., Ivanova,N., Mavromatis,K., Ovchinikova,G., Pati,A., Chen,A., Palaniappan,K., Land,M., Hauser,L., Chang,Y.J., Jeffries,C.D., Detter,J.C., Brambilla,E., Rohde,M., Tindall,B.J., Göker,M., Woyke,T., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Kyrpides,N.C., Klenk,H.P., Lapidus,A. ( 2011 ) Complete genome sequence of Cellulophaga algicola type strain (IC166) Stand.Genomic Sci 4 (1) :72-80.

http://www.ncbi.nlm.nih.gov/pubmed/21475589
2011 Borriss,R., Chen,X.H., Rueckert,C., Blom,J., Becker,A., Baumgarth,B., Fan,B., Pukall,R., Schumann,P., Spröer,C., Junge,H., Vater,J., Pühler,A., Klenk,H.P. ( 2011 ) Relationship of Bacillus amyloliquefaciens clades associated with strains DSM 7T and FZB42T: a proposal for Bacillus amyloliquefaciens subsp. amyloliquefaciens subsp. nov. and Bacillus amyloliquefaciens subsp. plantarum subsp. nov. based on complete genome sequence comparisons Int J Syst Evol Microbiol 61 (Pt 8) :1786-1801.

http://www.ncbi.nlm.nih.gov/pubmed/20817842
2011 Chertkov,O., Sikorski,J., Nolan,M., Lapidus,A., Lucas,S., DelRio,T.G., Tice,H., Cheng,J.F., Goodwin,L., Pitluck,S., Liolios,K., Ivanova,N., Mavromatis,K., Mikhailova,N., Ovchinnikova,G., Pati,A., Chen,A., Palaniappan,K., Djao,O.D., Land,M., Hauser,L., Chang,Y.J., Jeffries,C.D., Brettin,T., Han,C., Detter,J.C., Rohde,M., Goker,M., Woyke,T., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Klenk,H.P., Kyrpides,N.C. ( 2011 ) Complete genome sequence of Thermomonospora curvata type strain (B9) Stand.Genomic Sci 4 (1) :13-22.

http://www.ncbi.nlm.nih.gov/pubmed/21475583
2011 Borsodi,A.K., Pollák,B., Kéki,Z., Rusznyák,A., Kovács,A.L., Spröer,C., Schumann,P., Márialigeti,K., Tóth,E.M. ( 2011 ) Bacillus alkalisediminis sp. nov., an alkaliphilic and moderately halophilic bacterium isolated from sediment of extremely shallow soda ponds Int J Syst Evol Microbiol 61 (Pt 8) :1880-1886.

http://www.ncbi.nlm.nih.gov/pubmed/20833886
2011 Göker,M., Cleland,D., Saunders,E., Lapidus,A., Nolan,M., Lucas,S., Hammon,N., Deshpande,S., Cheng,J.F., Tapia,R., Han,C., Goodwin,L., Pitluck,S., Liolios,K., Pagani,I., Ivanova,N., Mavromatis,K., Pati,A., Chen,A., Palaniappan,K., Land,M., Hauser,L., Chang,Y.J., Jeffries,C.D., Detter,J.C., Beck,B., Woyke,T., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Kyrpides,N.C., Klenk,H.P. ( 2011 ) Complete genome sequence of Isosphaera pallida type strain (IS1B) Stand.Genomic Sci 4 (1) :63-71.

http://www.ncbi.nlm.nih.gov/pubmed/21475588
2011 Coorevits,A., Logan,N.A., Dinsdale,A.E., Halket,G., Scheldeman,P., Heyndrickx,M., Schumann,P., Van,L.A., De,V.P. ( 2011 ) Bacillus thermolactis sp. nov., isolated from dairy farms, and emended description of Bacillus thermoamylovorans Int J Syst Evol Microbiol 61 (Pt 8) :1954-1961.

http://www.ncbi.nlm.nih.gov/pubmed/20833876
2011 Gronow,S., Munk,C., Lapidus,A., Nolan,M., Lucas,S., Hammon,N., Deshpande,S., Cheng,J.F., Tapia,R., Han,C., Goodwin,L., Pitluck,S., Liolios,K., Ivanova,N., Mavromatis,K., Mikhailova,N., Pati,A., Chen,A., Palaniappan,K., Land,M., Hauser,L., Chang,Y.J., Jeffries,C.D., Brambilla,E., Rohde,M., Göker,M., Detter,J.C., Woyke,T., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Kyrpides,N.C., Klenk,H.P. ( 2011 ) Complete genome sequence of Paludibacter propionicigenes type strain (WB4) Stand.Genomic Sci 4 (1) :36-44.

http://www.ncbi.nlm.nih.gov/pubmed/21475585
2011 Rooney,A.P., Swezey,J.L., Pukall,R., Schumann,P., Spring,S. ( 2011 ) Peptoniphilus methioninivorax sp. nov., a Gram-positive anaerobic coccus isolated from retail ground beef Int J Syst Evol Microbiol 61 (Pt 8) :1962-1967.

http://www.ncbi.nlm.nih.gov/pubmed/20817843
2011 Ivanova,N., Rohde,C., Munk,C., Nolan,M., Lucas,S., DelRio,T.G., Tice,H., Deshpande,S., Cheng,J.F., Tapia,R., Han,C., Goodwin,L., Pitluck,S., Liolios,K., Mavromatis,K., Mikhailova,N., Pati,A., Chen,A., Palaniappan,K., Land,M., Hauser,L., Chang,Y.J., Jeffries,C.D., Brambilla,E., Rohde,M., Göker,M., Tindall,B.J., Woyke,T., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Kyrpides,N.C., Klenk,H.P., Lapidus,A. ( 2011 ) Complete genome sequence of Truepera radiovictrix type strain (RQ-24) Stand.Genomic Sci 4 (1) :91-99.

http://www.ncbi.nlm.nih.gov/pubmed/21475591
2011 Behrendt,U., Schumann,P., Hamada,M., Suzuki,K., Spröer,C., Ulrich,A. ( 2011 ) Reclassification of Leifsonia ginsengi (Qiu et al. 2007) as Herbiconiux ginsengi gen. nov., comb. nov. and description of Herbiconiux solani sp. nov., an actinobacterium associated with the phyllosphere of Solanum tuberosum L Int J Syst Evol Microbiol 61 (Pt 5) :1039-1047.

http://www.ncbi.nlm.nih.gov/pubmed/20511458
2011 Lang,E., Teshima,H., Lucas,S., Lapidus,A., Hammon,N., Deshpande,S., Nolan,M., Cheng,J.F., Pitluck,S., Liolios,K., Pagani,I., Mikhailova,N., Ivanova,N., Mavromatis,K., Pati,A., Tapia,R., Han,C., Goodwin,L., Chen,A., Palaniappan,K., Land,M., Hauser,L., Chang,Y.J., Jeffries,C.D., Brambilla,E.M., Kopitz,M., Rohde,M., Göker,M., Tindall,B.J., Detter,J.C., Woyke,T., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Klenk,H.P., Kyrpides,N.C. ( 2011 ) Complete genome sequence of Weeksella virosa type strain (9751) Stand.Genomic Sci 4 (1) :81-90.

http://www.ncbi.nlm.nih.gov/pubmed/21475590
2011 Pagani,I., Lapidus,A., Nolan,M., Lucas,S., Hammon,N., Deshpande,S., Cheng,J.F., Chertkov,O., Davenport,K., Tapia,R., Han,C., Goodwin,L., Pitluck,S., Liolios,K., Mavromatis,K., Ivanova,N., Mikhailova,N., Pati,A., Chen,A., Palaniappan,K., Land,M., Hauser,L., Chang,Y.J., Jeffries,C.D., Detter,J.C., Brambilla,E., Kannan,K.P., Djao,O.D., Rohde,M., Pukall,R., Spring,S., Göker,M., Sikorski,J., Woyke,T., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Kyrpides,N.C., Klenk,H.P. ( 2011 ) Complete genome sequence of Desulfobulbus propionicus type strain (1pr3) Stand.Genomic Sci 4 (1) :100-110.

http://www.ncbi.nlm.nih.gov/pubmed/21475592
2011 Pati,A., Gronow,S., Zeytun,A., Lapidus,A., Nolan,M., Hammon,N., Deshpande,S., Cheng,J.F., Tapia,R., Han,C., Goodwin,L., Pitluck,S., Liolios,K., Pagani,I., Ivanova,N., Mavromatis,K., Chen,A., Palaniappan,K., Land,M., Hauser,L., Chang,Y.J., Jeffries,C.D., Detter,J.C., Brambilla,E., Rohde,M., Göker,M., Woyke,T., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Kyrpides,N.C., Klenk,H.P., Lucas,S. ( 2011 ) Complete genome sequence of Bacteroides helcogenes type strain (P 36-108) Stand.Genomic Sci 4 (1) :45-53.

http://www.ncbi.nlm.nih.gov/pubmed/21475586
2011 Pitluck,S., Sikorski,J., Zeytun,A., Lapidus,A., Nolan,M., Lucas,S., Hammon,N., Deshpande,S., Cheng,J.F., Tapia,R., Han,C., Goodwin,L., Liolios,K., Pagani,I., Ivanova,N., Mavromatis,K., Pati,A., Chen,A., Palaniappan,K., Hauser,L., Chang,Y.J., Jeffries,C.D., Detter,J.C., Brambilla,E., Djao,O.D., Rohde,M., Spring,S., Goker,M., Woyke,T., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Kyrpides,N.C., Klenk,H.P., Land,M. ( 2011 ) Complete genome sequence of Calditerrivibrio nitroreducens type strain (Yu37-1) Stand.Genomic Sci 4 (1) :54-62.

http://www.ncbi.nlm.nih.gov/pubmed/21475587
2011 Stackebrandt,E. ( 2011 ) Towards a strategy to enhance access to microbial diversity Int J Syst Evol Microbiol 61 (Pt 3) :479-481.

http://www.ncbi.nlm.nih.gov/pubmed/21386100
2011 Kämpfer,P., Rekha,P.D., Schumann,P., Arun,A.B., Young,C.C., Chen,W.M., Sridhar,K.R. ( 2011 ) Microbacterium arthrosphaerae sp. nov., isolated from the faeces of the pill millipede Arthrosphaera magna Attems Int J Syst Evol Microbiol 61 (Pt 6) :1334-1337.

http://www.ncbi.nlm.nih.gov/pubmed/20656817
2011 Csotonyi,J.T., Stackebrandt,E., Swiderski,J., Schumann,P., Yurkov,V. ( 2011 ) An alphaproteobacterium capable of both aerobic and anaerobic anoxygenic photosynthesis but incapable of photoautotrophy: Charonomicrobium ambiphototrophicum, gen. nov., sp. nov. Photosynthesis research 107 :257-268.

http://www.ncbi.nlm.nih.gov/pubmed/21308412