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Publications of the DSMZ

Here you will find a complete list of all scientific publications.

Publications
2018 Aurass,P., Duvel,J., Karste,S., Nübel,U., Rabsch,W., Flieger,A. ( 2018 ) glnA truncation in Salmonella enterica results in a small colony variant phenotype, attenuated host cell entry, and reduced expression of flagellin and SPI-1-associated effector genes Applied and Environmental Microbiology 84 (2)

://WOS:000419048900011
2018 Becker,L., Fuchs,S., Pfeifer,Y., Semmler,T., Eckmanns,T., Korr,G., Sissolak,D., Friedrichs,M., Zill,E., Tung,M.L., Dohle,C., Kaase,M., Gatermann,S., Russmann,H., Steglich,M., Haller,S., Werner,G. ( 2018 ) Whole Genome Sequence Analysis of CTX-M-15 Producing Klebsiella Isolates Allowed Dissecting a Polyclonal Outbreak Scenario Front Microbiol 9 :322.

https://www.ncbi.nlm.nih.gov/pubmed/29527200
2018 Boekhout,T., Daniel,H.M., Groenewald,M., Yurkov,A., Bai,F.Y., Robert,V. ( 2018 ) The Yeasts, a new online and updatable platform for yeast diversity Medical Mycology 56 :S153-S153.

://WOS:000434852700867
2018 Mohr,K.I., Wolf,C., Nübel,U., Szafranska,A.K., Steglich,M., Hennessen,F., Gemperlein,K., Kämpfer,P., Martin,K., Müller,R., Wink,J. ( 2018 ) A polyphasic approach leads to seven new species of the cellulose-decomposing genus Sorangium, Sorangium ambruticinum sp. nov., Sorangium arenae sp. nov., Sorangium bulgaricum sp. nov., Sorangium dawidii sp. nov., Sorangium kenyense sp. nov., Sorangium orientale sp. nov. and Sorangium reichenbachii sp. nov Int J Syst Evol Microbiol

http://www.ncbi.nlm.nih.gov/pubmed/30234476
2018 Brandt,S.C., Ellinger,B., vanNguyen,T., Thi,Q.D., vanNguyen,G., Baschien,C., Yurkov,A., Hahnke,R.L., Schafer,W., Gand,M. ( 2018 ) A unique fungal strain collection from Vietnam characterized for high performance degraders of bioecological important biopolymers and lipids PLoS One 13 (8) :e0202695.

https://www.ncbi.nlm.nih.gov/pubmed/30161149
2018 Overmann,J., Huang,S., Nübel,U., Hahnke,R.L., Tindall,B.J. ( 2018 ) Relevance of phenotypic information for the taxonomy of not-yet-cultured microorganisms Syst Appl Microbiol

http://www.ncbi.nlm.nih.gov/pubmed/30197212
2018 Cockell,C.S., Schwendner,P., Perras,A., Rettberg,P., Beblo-Vranesevic,K., Bohmeier,M., Rabbow,E., Moissl-Eichinger,C., Wink,L., Marteinsson,V., Vannier,P., Gomez,F., Garcia-Descalzo,L., Ehrenfreund,P., Monaghan,E.P., Westall,F., Gaboyer,F., Amils,R., Malki,M., Pukall,R., Cabezas,P., Walter,N. ( 2018 ) Anaerobic microorganisms in astrobiological analogue environments: from field site to culture collection International Journal of Astrobiology 17 (4) :314-328.

://WOS:000443950500006
2018 Merker,M., Barbier,M., Cox,H., Rasigade,J.P., Feuerriegel,S., Kohl,T.A., Diel,R., Borrell,S., Gagneux,S., Nikolayevskyy,V., Andres,S., Nubel,U., Supply,P., Wirth,T., Niemann,S. ( 2018 ) Compensatory evolution drives multidrug-resistant tuberculosis in Central Asia Elife 7

https://www.ncbi.nlm.nih.gov/pubmed/30373719
2018 Kuzmanovic,N., Smalla,K., Gronow,S., Pulawska,J. ( 2018 ) Rhizobium tumorigenes sp. nov., a novel plant tumorigenic bacterium isolated from cane gall tumors on thornless blackberry Sci Rep 8 (1) :9051.

https://www.ncbi.nlm.nih.gov/pubmed/29899540
2018 Seth-Smith,H.M.B., Imkamp,F., Tagini,F., Cuenod,A., Homke,R., Jahn,K., Tschacher,A., Grendelmeier,P., Battig,V., Erb,S., Reinhard,M., Rutimann,G., Borrell,S., Gagneux,S., Casanova,C., Droz,S., Osthoff,M., Tamm,M., Nubel,U., Greub,G., Keller,P.M., Egli,A. ( 2018 ) Discovery and Characterization of Mycobacterium basiliense sp. nov., a Nontuberculous Mycobacterium Isolated From Human Lungs Front Microbiol 9 :3184.

https://www.ncbi.nlm.nih.gov/pubmed/30671031
2018 Masinova,T., Yurkov,A., Baldrian,P. ( 2018 ) Forest soil yeasts: Decomposition potential and the utilization of carbon sources Fungal Ecology 34 :10-19.

://WOS:000436916100002
2018 Nouioui,I., Carro,L., Sangal,V., Jando,M., Igual,J.M., Goodfellow,M., Klenk,H.P. ( 2018 ) Formal description of Mycobacterium neglectum sp. nov. and Mycobacterium palauense sp. nov., rapidly growing actinobacteria Antonie Van Leeuwenhoek 111 (7) :1209-1223.

https://www.ncbi.nlm.nih.gov/pubmed/29404824
2018 Heeger,F., Bourne,E.C., Baschien,C., Yurkov,A., Bunk,B., Sproer,C., Overmann,J., Mazzoni,C.J., Monaghan,M.T. ( 2018 ) Long-read DNA metabarcoding of ribosomal RNA in the analysis of fungi from aquatic environments Mol Ecol Resour 18 (6) :1500-1514.

https://www.ncbi.nlm.nih.gov/pubmed/30106226
2018 Damste,J.S.S., Rijpstra,W.I.C., Foesel,B.U., Huber,K.J., Overmann,J., Nakagawa,S., Kim,J.J., Dunfield,P.F., Dedysh,S.N., Villanueva,L. ( 2018 ) An overview of the occurrence of ether- and ester-linked iso-diabolic acid membrane lipids in microbial cultures of the Acidobacteria: Implications for brGDGT paleoproxies for temperature and pH Organic Geochemistry 124 :63-76.

://WOS:000443952100006
2018 Krishnan,R., Lang,E., Midha,S., Patil,P.B., Rameshkumar,N. ( 2018 ) Isolation and characterization of a novel 1-aminocyclopropane-1-carboxylate (ACC) deaminase producing plant growth promoting marine Gammaproteobacteria from crops grown in brackish environments. Proposal for Pokkaliibacter plantistimulans gen. nov., sp. nov., Balneatrichaceae fam. nov. in the order Oceanospirillales and an emended description of the genus Balneatrix Syst Appl Microbiol 41 (6) :570-580.

https://www.ncbi.nlm.nih.gov/pubmed/30139512
2018 Unfried,F., Becker,S., Robb,C.S., Hehemann,J.H., Markert,S., Heiden,S.E., Hinzke,T., Becher,D., Reintjes,G., Kruger,K., Avci,B., Kappelmann,L., Hahnke,R.L., Fischer,T., Harder,J., Teeling,H., Fuchs,B., Barbeyron,T., Amann,R.I., Schweder,T. ( 2018 ) Adaptive mechanisms that provide competitive advantages to marine bacteroidetes during microalgal blooms ISME J 12 (12) :2894-2906.

https://www.ncbi.nlm.nih.gov/pubmed/30061707
2018 Zammuto,V., Fuchs,F.M., Fiebrandt,M., Stapelmann,K., Ulrich,N.J., Maugeri,T.L., Pukall,R., Gugliandolo,C., Moeller,R. ( 2018 ) Comparing Spore Resistance of Bacillus Strains Isolated from Hydrothermal Vents and Spacecraft Assembly Facilities to Environmental Stressors and Decontamination Treatments Astrobiology 18 (11) :1425-1434.

https://www.ncbi.nlm.nih.gov/pubmed/30289268
2018 Nouioui,I., Ghodhbane-Gtari,F., Jando,M., Tisa,L.S., Klenk,H.P., Gtari,M. ( 2018 ) Frankia torreyi sp. nov., the first actinobacterium of the genus Frankia Brunchorst 1886, 174(AL) isolated in axenic culture Antonie Van Leeuwenhoek

https://www.ncbi.nlm.nih.gov/pubmed/30030730
2018 Oren,A., Garrity,G.M., Spring,S., Onrust,L., Petzoldt,D., Eeckhaut,V., DeMaesschalck,C., Haesebrouck,F., Rautenschlein,S., Ducatelle,R., VanImmerseel,F., Taras,D. ( 2018 ) Valid publication of the names Caecibacterium and Caecibacterium sporoformans Int J Syst Evol Microbiol

https://www.ncbi.nlm.nih.gov/pubmed/30556800
2018 Tindall,B.J. ( 2018 ) An analysis of the term 'standing in nomenclature', as used in the International Code of Nomenclature of Prokaryotes Int J Syst Evol Microbiol

https://www.ncbi.nlm.nih.gov/pubmed/30575500
2018 Tindall,B.J. ( 2018 ) Names above the rank of genus; the radical approach Int J Syst Evol Microbiol

https://www.ncbi.nlm.nih.gov/pubmed/30543321
2018 Hausmann,B., Pelikan,C., Herbold,C.W., Kostlbacher,S., Albertsen,M., Eichorst,S.A., GlavinaDelRio,T., Huemer,M., Nielsen,P.H., Rattei,T., Stingl,U., Tringe,S.G., Trojan,D., Wentrup,C., Woebken,D., Pester,M., Loy,A. ( 2018 ) Peatland Acidobacteria with a dissimilatory sulfur metabolism ISME J

https://www.ncbi.nlm.nih.gov/pubmed/29476143
2018 Anantharaman,K., Hausmann,B., Jungbluth,S.P., Kantor,R.S., Lavy,A., Warren,L.A., Rappe,M.S., Pester,M., Loy,A., Thomas,B.C., Banfield,J.F. ( 2018 ) Expanded diversity of microbial groups that shape the dissimilatory sulfur cycle ISME J

https://www.ncbi.nlm.nih.gov/pubmed/29467397
2018 Shibl,A.A., Ngugi,D.K., Talarmin,A., Thompson,L.R., Blom,J., Stingl,U. ( 2018 ) The genome of a novel isolate of Prochlorococcus from the Red Sea contains transcribed genes for compatible solute biosynthesis FEMS Microbiol Ecol 94 (12)

https://www.ncbi.nlm.nih.gov/pubmed/30188995
2018 Yepes,L.M., Cieniewicz,E.J., Krenz,B., McLane,H., Thompson,J.R., Perry,K.L., Fuchs,M. ( 2018 ) Causative Role of Grapevine Red Blotch Virus in Red Blotch Disease Phytopathology

2018 Webster,C.G., Pichon,E., vanMunster,M., Monsion,B., Deshoux,M., Gargani,D., Calevro,F., Jimenez,J., Moreno,A., Krenz,B., Thompson,J.R., Perry,K.L., Fereres,A., Blanc,S., Uzest,M. ( 2018 ) Identification of plant virus receptor candidates in the stylets of their aphid vectors J Virol

https://www.ncbi.nlm.nih.gov/pubmed/29769332
2018 Webster,C.G., Pichon,E., vanMunster,M., Monsion,B., Deshoux,M., Gargani,D., Calevro,F., Jimenez,J., Moreno,A., Krenz,B., Thompson,J.R., Perry,K.L., Fereres,A., Blanc,S., Uzest,M. ( 2018 ) Identification of plant virus receptor candidates in the stylets of their aphid vectors J Virol

https://www.ncbi.nlm.nih.gov/pubmed/29769332
2018 Hofmann,J.D., Otto,A., Berges,M., Biedendieck,R., Michel,A.M., Becher,D., Jahn,D., Neumann-Schaal,M. ( 2018 ) Metabolic Reprogramming of Clostridioides difficile During the Stationary Phase With the Induction of Toxin Production Front Microbiol 9 :1970.

https://www.ncbi.nlm.nih.gov/pubmed/30186274
2018 Berges,M., Michel,A.M., Lassek,C., Nuss,A.M., Beckstette,M., Dersch,P., Riedel,K., Sievers,S., Becher,D., Otto,A., Maass,S., Rohde,M., Eckweiler,D., Borrero-deAcuna,J.M., Jahn,M., Neumann-Schaal,M., Jahn,D. ( 2018 ) Iron Regulation in Clostridioides difficile Front Microbiol 9 :3183.

https://www.ncbi.nlm.nih.gov/pubmed/30619231
2018 Bernal,I., Hofmann,J.D., Bulitta,B., Klawonn,F., Michel,A.M., Jahn,D., Neumann-Schaal,M., Bruder,D., Jansch,L. ( 2018 ) Clostridioides difficile Activates Human Mucosal-Associated Invariant T Cells Front Microbiol 9 :2532.

https://www.ncbi.nlm.nih.gov/pubmed/30410474
2018 Bischof,L.F., Haurat,M.F., Hoffmann,L., Albersmeier,A., Wolf,J., Neu,A., Pham,T.K., Albaum,S.P., Jakobi,T., Schouten,S., Neumann-Schaal,M., Wright,P.C., Kalinowski,J., Siebers,B., Albers,S.V. ( 2018 ) Early Response of Sulfolobus acidocaldarius to Nutrient Limitation Front Microbiol 9 :3201.

https://www.ncbi.nlm.nih.gov/pubmed/30687244
2018 Hofmann,J.D., Otto,A., Berges,M., Biedendieck,R., Michel,A.M., Becher,D., Jahn,D., Neumann-Schaal,M. ( 2018 ) Metabolic Reprogramming of Clostridioides difficile During the Stationary Phase With the Induction of Toxin Production Front Microbiol 9 :1970.

https://www.ncbi.nlm.nih.gov/pubmed/30186274
2018 Neumann-Schaal,M., Metzendorf,N.G., Troitzsch,D., Nuss,A.M., Hofmann,J.D., Beckstette,M., Dersch,P., Otto,A., Sievers,S. ( 2018 ) Tracking gene expression and oxidative damage of O2-stressed Clostridioides difficile by a multi-omics approach Anaerobe

https://www.ncbi.nlm.nih.gov/pubmed/29859941
2018 Ghequire,M.G.K., Ozturk,B. ( 2018 ) A colicin M-type bacteriocin from Pseudomonas aeruginosa targeting the HxuC heme receptor requires a novel immunity partner Appl Environ Microbiol

https://www.ncbi.nlm.nih.gov/pubmed/29980560
2018 Ghequire,M.G.K., Ozturk,B., DeMot,R. ( 2018 ) Lectin-Like Bacteriocins Front Microbiol 9 :2706.

https://www.ncbi.nlm.nih.gov/pubmed/30483232
2018 Murillo,T., Ramirez-Vargas,G., Riedel,T., Overmann,J., Andersen,J.M., Guzman-Verri,C., Chaves-Olarte,E., Rodriguez,C. ( 2018 ) Two Groups of Cocirculating, Epidemic Clostridiodes difficile Strains Microdiversify through Different Mechanisms Genome Biol Evol 10 (3) :982-998.

https://www.ncbi.nlm.nih.gov/pubmed/29617810
2018 Becker,K.W., Elling,F.J., Schroder,J.M., Lipp,J.S., Goldhammer,T., Zabel,M., Elvert,M., Overmann,J., Hinrichs,K.U. ( 2018 ) Isoprenoid quinones resolve the stratification of microbial redox processes in a biogeochemical continuum from the photic zone to deep anoxic sediments of the Black Sea Appl Environ Microbiol

https://www.ncbi.nlm.nih.gov/pubmed/29523543
2018 Pascual,J., Foesel,B.U., Geppert,A., Huber,K.J., Boedeker,C., Luckner,M., Wanner,G., Overmann,J. ( 2018 ) Roseisolibacter agri gen. nov., sp. nov., a novel slow-growing member of the under-represented phylum Gemmatimonadetes Int J Syst Evol Microbiol 68 (4) :1028-1036.

https://www.ncbi.nlm.nih.gov/pubmed/29458671
2018 Gutleben,J., ChaibDeMares,M., vanElsas,J.D., Smidt,H., Overmann,J., Sipkema,D. ( 2018 ) The multi-omics promise in context: from sequence to microbial isolate Crit Rev Microbiol 44 (2) :212-229.

https://www.ncbi.nlm.nih.gov/pubmed/28562180
2018 Pati,N.B., Doijad,S.P., Schultze,T., Mannala,G.K., Yao,Y., Jaiswal,S., Ryan,D., Suar,M., Gwozdzinski,K., Bunk,B., Mraheil,M.A., Marahiel,M.A., Hegemann,J.D., Sproer,C., Goesmann,A., Falgenhauer,L., Hain,T., Imirzalioglu,C., Mshana,S.E., Overmann,J., Chakraborty,T. ( 2018 ) Enterobacter bugandensis: a novel enterobacterial species associated with severe clinical infection Sci Rep 8 (1) :5392.

https://www.ncbi.nlm.nih.gov/pubmed/29599516
2018 Steglich,M., Hofmann,J.D., Helmecke,J., Sikorski,J., Sproer,C., Riedel,T., Bunk,B., Overmann,J., Neumann-Schaal,M., Nübel,U. ( 2018 ) Convergent Loss of ABC Transporter Genes From Clostridioides difficile Genomes Is Associated With Impaired Tyrosine Uptake and p-Cresol Production Front Microbiol 9 :901.

https://www.ncbi.nlm.nih.gov/pubmed/29867812
2018 Tomasch,J., Wang,H., Hall,A.T.K., Patzelt,D., Preusse,M., Petersen,J., Brinkmann,H., Bunk,B., Bhuju,S., Jarek,M., Geffers,R., Lang,A.S., Wagner-Dobler,I. ( 2018 ) Packaging of Dinoroseobacter shibae DNA into Gene Transfer Agent Particles Is Not Random Genome Biol Evol 10 (1) :359-369.

https://www.ncbi.nlm.nih.gov/pubmed/29325123
2018 Klotz,F., Brinkhoff,T., Freese,H.M., Wietz,M., Teske,A., Simon,M., Giebel,H.A. ( 2018 ) Tritonibacter horizontis gen. nov., sp. nov., a member of the Rhodobacteraceae, isolated from the Deepwater Horizon oil spill Int J Syst Evol Microbiol 68 (3) :736-744.

https://www.ncbi.nlm.nih.gov/pubmed/29458459
2018 Gutleben,J., ChaibDeMares,M., vanElsas,J.D., Smidt,H., Overmann,J., Sipkema,D. ( 2018 ) The multi-omics promise in context: from sequence to microbial isolate Crit Rev Microbiol 44 (2) :212-229.

https://www.ncbi.nlm.nih.gov/pubmed/28562180
2018 Schall,P., Gossner,M.M., Heinrichs,S., Fischer,M., Boch,S., Prati,D., Jung,K., Baumgartner,V., Blaser,S., Bohm,S., Buscot,F., Daniel,R., Goldmann,K., Kaiser,K., Kahl,T., Lange,M., Muller,J., Overmann,J., Renner,S.C., Schulze,E.D., Sikorski,J., Tschapka,M., Turke,M., Weisser,W.W., Wemheuer,B., Wubet,T., Ammer,C. ( 2018 ) The impact of even-aged and uneven-aged forest management on regional biodiversity of multiple taxa in European beech forests Journal of Applied Ecology 55 (1) :267-278.

://WOS:000417764600027
2018 Ludewig-Klingner,A.K., Michael,V., Jarek,M., Brinkmann,H., Petersen,J. ( 2018 ) Distribution and Evolution of Peroxisomes in Alveolates (Apicomplexa, Dinoflagellates, Ciliates) Genome Biol Evol 10 (1) :1-13.

https://www.ncbi.nlm.nih.gov/pubmed/29202176
2018 Bajerski,F., Stock,J., Hanf,B., Darienko,T., Heine-Dobbernack,E., Lorenz,M., Naujox,L., Keller,E.R.J., Schumacher,H.M., Friedl,T., Eberth,S., Mock,H.P., Kniemeyer,O., Overmann,J. ( 2018 ) ATP Content and Cell Viability as Indicators for Cryostress Across the Diversity of Life Front Physiol 9 :921.

https://www.ncbi.nlm.nih.gov/pubmed/30065659
2018 Lubke,A.L., Minatelli,S., Riedel,T., Lugert,R., Schober,I., Sproer,C., Overmann,J., Gross,U., Zautner,A.E., Bohne,W. ( 2018 ) The transducer-like protein Tlp12 of Campylobacter jejuni is involved in glutamate and pyruvate chemotaxis BMC Microbiol 18 (1) :111.

https://www.ncbi.nlm.nih.gov/pubmed/30200886
2018 Ramirez-Vargas,G., Lopez-Urena,D., Badilla,A., Orozco-Aguilar,J., Murillo,T., Rojas,P., Riedel,T., Overmann,J., Gonzalez,G., Chaves-Olarte,E., Quesada-Gomez,C., Rodriguez,C. ( 2018 ) Novel Clade C-I Clostridium difficile strains escape diagnostic tests, differ in pathogenicity potential and carry toxins on extrachromosomal elements Sci Rep 8 (1) :13951.

https://www.ncbi.nlm.nih.gov/pubmed/30224751
2018 Seugendo,M., Janssen,I., Lang,V., Hasibuan,I., Bohne,W., Cooper,P., Daniel,R., Gunka,K., Kusumawati,R.L., Mshana,S.E., vonMuller,L., Okamo,B., Ortlepp,J.R., Overmann,J., Riedel,T., Rupnik,M., Zimmermann,O., Gross,U. ( 2018 ) Prevalence and Strain Characterization of Clostridioides (Clostridium) difficile in Representative Regions of Germany, Ghana, Tanzania and Indonesia - A Comparative Multi-Center Cross-Sectional Study Front Microbiol 9 :1843.

https://www.ncbi.nlm.nih.gov/pubmed/30131799
2018 Bajerski,F., Stock,J., Hanf,B., Darienko,T., Heine-Dobbernack,E., Lorenz,M., Naujox,L., Keller,E.R.J., Schumacher,H.M., Friedl,T., Eberth,S., Mock,H.P., Kniemeyer,O., Overmann,J. ( 2018 ) ATP Content and Cell Viability as Indicators for Cryostress Across the Diversity of Life Front Physiol 9 :921.

https://www.ncbi.nlm.nih.gov/pubmed/30065659
2018 Doijad,S.P., Poharkar,K.V., Kale,S.B., Kerkar,S., Kalorey,D.R., Kurkure,N.V., Rawool,D.B., Malik,S.V.S., Ahmad,R.Y., Hudel,M., Chaudhari,S.P., Abt,B., Overmann,J., Weigel,M., Hain,T., Barbuddhe,S.B., Chakraborty,T. ( 2018 ) Listeria goaensis sp. nov Int J Syst Evol Microbiol 68 (10) :3285-3291.

https://www.ncbi.nlm.nih.gov/pubmed/30156532
2018 Bartling,P., Vollmers,J., Petersen,J. ( 2018 ) The first world swimming championships of roseobacters-Phylogenomic insights into an exceptional motility phenotype Syst Appl Microbiol 41 (6) :544-554.

https://www.ncbi.nlm.nih.gov/pubmed/30224097
2018 RioBartulos,C., Rogers,M.B., Williams,T.A., Gentekaki,E., Brinkmann,H., Cerff,R., Liaud,M.F., Hehl,A.B., Yarlett,N.R., Gruber,A., Kroth,P.G., vanderGiezen,M. ( 2018 ) Mitochondrial Glycolysis in a Major Lineage of Eukaryotes Genome Biol Evol 10 (9) :2310-2325.

https://www.ncbi.nlm.nih.gov/pubmed/30060189
2018 Mehner-Breitfeld,D., Rathmann,C., Riedel,T., Just,I., Gerhard,R., Overmann,J., Bruser,T. ( 2018 ) Evidence for an Adaptation of a Phage-Derived Holin/Endolysin System to Toxin Transport in Clostridioides difficile Front Microbiol 9 :2446.

https://www.ncbi.nlm.nih.gov/pubmed/30405545
2018 Wiegand,S., Jogler,M., Jogler,C. ( 2018 ) On the maverick Planctomycetes FEMS Microbiol Rev 42 (6) :739-760.

https://www.ncbi.nlm.nih.gov/pubmed/30052954
2018 Kubannek,F., Moß,C., Huber,K., Overmann,J., Schröder,U., Krewer,U. ( 2018 ) Concentration Pulse Method for the Investigation of Transformation Pathways in a Glycerol-Fed Bioelectrochemical System Front Energy Res 6

2018 Pascual,J., Huber,K.J., Overmann,J. ( 2018 ) Arenimicrobium Bergey's Manual of Systematic Bacteriology

2018 Pascual,J., Huber,K.J., Overmann,J. ( 2018 ) Brevitalea Bergey's Manual of Systematic Bacteriology

2018 Pascual,J., Huber,K.J., Overmann,J. ( 2018 ) Pyrinomonadaceae Bergey's Manual of Systematic Bacteriology

2017 Borsodi,A.K., Szili-Kovacs,T., Schumann,P., Sproer,C., Marialigeti,K., Toth,E. ( 2017 ) Nesterenkonia pannonica sp nov., a novel alkaliphilic and moderately halophilic actinobacterium International Journal of Systematic and Evolutionary Microbiology 67 (10) :4116-4120.

://WOS:000413484800069
2017 Borsodi,A.K., Toth,E., Aszalos,J.M., Barany,A., Schumann,P., Sproer,C., Kovacs,A.L., Marialigeti,K., Szili-Kovacs,T. ( 2017 ) Bacillus kiskunsagensis sp nov., a novel alkaliphilic and moderately halophilic bacterium isolated from soda soil International Journal of Systematic and Evolutionary Microbiology 67 (9) :3490-3495.

://WOS:000417836100059
2017 Camacho,M., Redondo-Gomez,S., Rodriguez-Llorente,I., Rohde,M., Sproer,C., Schumann,P., Klenk,H.P., Montero-Calasanz,M.D. ( 2017 ) Kocuria salina sp nov., an actinobacterium isolated from the rhizosphere of the halophyte Arthrocnemum macrostachyum and emended description of Kocuria turfanensis International Journal of Systematic and Evolutionary Microbiology 67 (12) :5006-5012.

://WOS:000417933700020
2017 Chun,B.H., Lee,H.J., Jeong,S.E., Schumann,P., Jeon,C.O. ( 2017 ) Leucobacter ruminantium sp nov., isolated from the bovine rumen International Journal of Systematic and Evolutionary Microbiology 67 (8) :2634-2639.

://WOS:000409533100022
2017 Felfoldi,T., Fiko,R.D., Mentes,A., Kovacs,E., Mathe,I., Schumann,P., Toth,E. ( 2017 ) Quisquiliibacterium transsilvanicum gen. nov., sp nov., a novel betaproteobacterium isolated from a waste-treating bioreactor International Journal of Systematic and Evolutionary Microbiology 67 (11) :4742-4746.

://WOS:000414976000071
2017 Felfoldi,T., Schumann,P., Mentes,A., Keki,Z., Mathe,I., Toth,E.M. ( 2017 ) Caenimicrobium hargitense gen. nov., sp nov., a new member of the family Alcaligenaceae (Betaproteobacteria) isolated from activated sludge International Journal of Systematic and Evolutionary Microbiology 67 (3) :627-632.

://WOS:000399232900016
2017 Kim,J.J., Marjerrison,C.E., Shartau,S.L.C., Brady,A.L., Sharp,C.E., Rijpstra,W.I.C., Damste,J.S.S., Schumann,P., Grasby,S.E., Dunfield,P.F. ( 2017 ) Actinocrinis puniceicyclus gen. nov., sp nov., an actinobacterium isolated from an acidic spring International Journal of Systematic and Evolutionary Microbiology 67 (3) :602-609.

://WOS:000399232900012
2017 Liu,B., Liu,G.H., Sengonca,C., Schumann,P., Wang,J.P., Zhu,Y.J., Liu,Q.Y., Wang,M.K. ( 2017 ) Bacillus praedii sp nov., isolated from purplish paddy soil International Journal of Systematic and Evolutionary Microbiology 67 (8) :2823-2828.

://WOS:000409533100051
2017 Liu,B., Liu,G.H., Sengonca,C., Schumann,P., Wang,J.P., Zhu,Y.J., Zhang,H.F. ( 2017 ) Bacillus wudalianchiensis sp nov., isolated from grass soils of the Wudalianchi scenic area International Journal of Systematic and Evolutionary Microbiology 67 (8) :2897-2902.

://WOS:000409533100063
2017 Liu,Y., Li,N.N., Eom,M.K., Schumann,P., Zhang,X., Cao,Y.H., Ge,Y.Y., Xiao,M., Zhao,J.R., Cheng,C., Kim,S.G. ( 2017 ) Bacillus ciccensis sp nov., isolated from maize (Zea mays L.) seeds International Journal of Systematic and Evolutionary Microbiology 67 (11) :4606-4611.

://WOS:000414976000050
2017 Mohammadipanah,F., Montero-Calasanz,M.D., Schumann,P., Sproer,C., Rohde,M., Klenk,H.P. ( 2017 ) Promicromonospora kermanensis sp nov., an actinobacterium isolated from soil International Journal of Systematic and Evolutionary Microbiology 67 (2) :262-267.

://WOS:000397002800013
2017 Schumann,P., Busse,H.J. ( 2017 ) Reclassification of Arthrobacter sanguinis (Mages et al. 2009) as Haematomicrobium sanguinis gen. nov., comb. nov. International Journal of Systematic and Evolutionary Microbiology 67 (4) :1052-1057.

://WOS:000401992800048
2017 Schumann,P., Zhang,D.C., Franca,L., Albuquerque,L., daCosta,M.S., Margesin,R. ( 2017 ) Psychromicrobium silvestre gen. nov., sp nov., an actinobacterium isolated from alpine forest soils International Journal of Systematic and Evolutionary Microbiology 67 (3) :640-645.

://WOS:000399232900018
2017 Shahinpei,A., Amoozegar,M.A., Fazeli,S.A.S., Schumann,P., Sproer,C., Ventosa,A. ( 2017 ) Aliidiomarina sedimenti sp nov., a haloalkaliphilic bacterium in the family Idiomarinaceae International Journal of Systematic and Evolutionary Microbiology 67 (7) :2087-2092.

://WOS:000408263300002
2017 Knierim,D., Menzel,W., Winter,S. ( 2017 ) Analysis of the complete genome sequence of euphorbia ringspot virus, an atypical member of the genus Potyvirus Archives of Virology 162 :291-293.

2017 Toth,A., Baka,E., Bata-Vidacs,I., Luzics,S., Kosztik,J., Toth,E., Keki,Z., Schumann,P., Tancsics,A., Nagy,I., Sos,E., Kukolya,J. ( 2017 ) Micrococcoides hystricis gen. nov., sp nov., a novel member of the family Micrococcaceae, phylum Actinobacteria International Journal of Systematic and Evolutionary Microbiology 67 (8) :2758-2765.

://WOS:000409533100041
2017 Roenhorst,J.W., Lacomme,C., Nisbet,C., Leichtfried,T., Menzel,W., Winter,S., vanderVlug,R.A.A. ( 2017 ) Euphresco project VirusCollect - fulfilling the need for a common collection of plant viruses and viroids for reference EPPO Bulletin 47 :41-47.

2017 Toth,E., Szuroczki,S., Keki,Z., Boka,K., Szili-Kovacs,T., Schumann,P. ( 2017 ) Gellertiella hungarica gen. nov., sp nov., a novel bacterium of the family Rhizobiaceae isolated from a spa in Budapest International Journal of Systematic and Evolutionary Microbiology 67 (11) :4565-4571.

://WOS:000414976000043
2017 Menzel,W., Winter,S. ( 2017 ) First report of Mint vein banding-associated virus infecting Mentha × gracilis in Germany New Disease Reports 35 :9.

2017 Toth,E., Szuroczki,S., Keki,Z., Kosztik,J., Makk,J., Boka,K., Sproer,C., Marialigeti,K., Schumann,P. ( 2017 ) Brevundimonas balnearis sp nov., isolated from the well water of a thermal bath International Journal of Systematic and Evolutionary Microbiology 67 (4) :1033-1038.

://WOS:000401992800045
2017 Afouda,L.A.C., Kone,D., Zinsou,V., Dossou,L., Kenyon,L., Winter,S., Knierim,D. ( 2017 ) Virus surveys of Capsicum spp. in the Republic of Benin reveal the prevalence of pepper vein yellows virus and the identification of a previously uncharacterised polerovirus species Archives of Virology 162 :1599-1607.

2017 Mbewe,W., Tairo,F., Sseruwagi,P., Ndunguru,J., Duffy,S., Mukasa,S., Benesi,I., Sheat,S., Koerbler,M., Winter,S. ( 2017 ) Variability in P1 gene redefines phylogenetic relationships among cassava brown streak viruses Virology Journal 14 :1-7.

2017 Wubbeler,J.H., Oppermann-Sanio,F.B., Ockenfels,A., Rottig,A., Osthaar-Ebker,A., Verbarg,S., Poehlein,A., Madkour,M.H., Al-Ansari,A.M., Almakishah,N.H., Daniel,R., Steinbuchel,A. ( 2017 ) Sphingomonas jeddahensis sp nov., isolated from Saudi Arabian desert soil International Journal of Systematic and Evolutionary Microbiology 67 (10) :4057-4063.

://WOS:000413484800058
2017 Kone,N., Bediako,E.A., Silue,S., Kone,D., Koita,O., Menzel,W., Winter,S. ( 2017 ) Influence of planting date on incidence and severity of viral disease on cucurbits under field conditions. Annals of Agricultural Science 62 (99-104)

2017 Guadie,D., Abraham,A., Tesfaye,K., Winter,S., Menzel,W., Knierim,D. ( 2017 ) First report of maize yellow mosaic virus infecting maize (Zea mays) in Ethiopia Plant Disease

2017 Dubinina,G., Savvichev,A., Orlova,M., Gavrish,E., Verbarg,S., Grabovich,M. ( 2017 ) Beggiatoa leptomitoformis sp nov., the first freshwater member of the genus capable of chemolithoautotrophic growth International Journal of Systematic and Evolutionary Microbiology 67 (2) :197-204.

://WOS:000397002800003
2017 Krapp,S., Schuy,C., Greiner,E., Stephan,I., Alberter,B., Funk,C., Marschall,M., Wege,C., Bailer,S.M., Kleinow,T., Krenz,B. ( 2017 ) Begomoviral Movement Protein Effects in Human and Plant Cells: Towards New Potential Interaction Partners. Viruses 11 (E334)

2017 Toth,E., Schumann,P., Hamada,M., Suzuki,K.I. ( 2017 ) International Committee on Systematics of Prokaryotes Subcommittee on the taxonomy of the suborder Micrococcineae Minutes of the meeting, 29 July 2014, Montreal, Canada Int J Syst Evol Microbiol 67 (6) :2068-2069.

https://www.ncbi.nlm.nih.gov/pubmed/28665267
2017 Rosa,C., Margaria,P., Geib,S.M., Scully,E.D. ( 2017 ) Novel insights into the Elm Yellows phytoplasma genome and into the metagenome of Elm Yellows-infected elms. Proc. American Elm Restoration Workshop 2016 :49-57.

2017 Mbewe,W., Winter,S., Mukasa,S., Tairo,F., Sseruwagi,P., Ndunguru,J., Duffy,S. ( 2017 ) Deep Sequencing Reveals a Divergent Ugandan cassava brown streak virus Isolate from Malawi Genome Announc 5 (33)

https://www.ncbi.nlm.nih.gov/pubmed/28818908
2017 Atasayar,E., Zimmermann,O., Sproer,C., Schumann,P., Gross,U. ( 2017 ) Corynebacterium gottingense sp nov., isolated from a clinical patient International Journal of Systematic and Evolutionary Microbiology 67 (11) :4494-4499.

://WOS:000414976000032
2017 Rottig,A., Atasayar,E., Meier-Kolthoff,J.P., Sproer,C., Schumann,P., Schauer,J., Steinbuchel,A. ( 2017 ) Streptomyces jeddahensis sp nov., an oleaginous bacterium isolated from desert soil International Journal of Systematic and Evolutionary Microbiology 67 (6) :1676-1682.

://WOS:000405503800010
2017 Wink,J., Schumann,P., Atasayar,E., Klenk,H.P., Zaburannyi,N., Westermann,M., Martin,K., Glaeser,S.P., Kampfer,P. ( 2017 ) 'Streptomyces caelicus', an antibiotic-producing species of the genus Streptomyces, and Streptomyces canchipurensis Li et al. 2015 are later heterotypic synonyms of Streptomyces muensis Ningthoujam et al. 2014 International Journal of Systematic and Evolutionary Microbiology 67 (3) :548-556.

://WOS:000399232900004
2017 Hahn,M.W., Schmidt,J., Koll,U., Rohde,M., Verbarg,S., Pitt,A., Nakai,R., Naganuma,T., Lang,E. ( 2017 ) Silvanigrella aquatica gen. nov., sp nov., isolated from a freshwater lake, description of Silvanigrellaceae fam. nov and Silvanigrellales ord. nov., reclassification of the order Bdellovibrionales in the class Oligoflexia, reclassification of the families Bacteriovoracaceae and Halobacteriovoraceae in the new order Bacteriovoracales ord. nov., and reclassification of the family Pseudobacteriovoracaceae in the order Oligoflexales International Journal of Systematic and Evolutionary Microbiology 67 (8) :2555-2568.

://WOS:000409533100010
2017 Tancsics,A., Mathe,I., Benedek,T., Toth,E.M., Atasayar,E., Sproer,C., Marialigeti,K., Felfoldi,T., Kriszt,B. ( 2017 ) Rhodococcus sovatensis sp. nov., an actinomycete isolated from the hypersaline and heliothermal Lake Ursu Int J Syst Evol Microbiol 67 (2) :190-196.

https://www.ncbi.nlm.nih.gov/pubmed/27902266
2017 Doberenz,S., Eckweiler,D., Reichert,O., Jensen,V., Bunk,B., Sproer,C., Kordes,A., Frangipani,E., Luong,K., Korlach,J., Heeb,S., Overmann,J., Kaever,V., Haussler,S. ( 2017 ) Identification of a Pseudomonas aeruginosa PAO1 DNA Methyltransferase, Its Targets, and Physiological Roles MBio 8 (1)

https://www.ncbi.nlm.nih.gov/pubmed/28223461
2017 Meier-Kolthoff,J.P., Goker,M. ( 2017 ) VICTOR: genome-based phylogeny and classification of prokaryotic viruses Bioinformatics 33 (21) :3396-3404.

https://www.ncbi.nlm.nih.gov/pubmed/29036289
2017 Donner,J., Bunk,B., Schober,I., Sproer,C., Bergmann,S., Jarek,M., Overmann,J., Wagner-Dobler,I. ( 2017 ) Complete Genome Sequences of Three Multidrug-Resistant Clinical Isolates of Streptococcus pneumoniae Serotype 19A with Different Susceptibilities to the Myxobacterial Metabolite Carolacton Genome Announc 5 (7)

https://www.ncbi.nlm.nih.gov/pubmed/28209832
2017 Sczyrba,A., Hofmann,P., Belmann,P., Koslicki,D., Janssen,S., Droge,J., Gregor,I., Majda,S., Fiedler,J., Dahms,E., Bremges,A., Fritz,A., Garrido-Oter,R., Jorgensen,T.S., Shapiro,N., Blood,P.D., Gurevich,A., Bai,Y., Turaev,D., DeMaere,M.Z., Chikhi,R., Nagarajan,N., Quince,C., Meyer,F., Balvociute,M., Hansen,L.H., Sorensen,S.J., Chia,B.K.H., Denis,B., Froula,J.L., Wang,Z., Egan,R., DonKang,D., Cook,J.J., Deltel,C., Beckstette,M., Lemaitre,C., Peterlongo,P., Rizk,G., Lavenier,D., Wu,Y.W., Singer,S.W., Jain,C., Strous,M., Klingenberg,H., Meinicke,P., Barton,M.D., Lingner,T., Lin,H.H., Liao,Y.C., Silva,G.G.Z., Cuevas,D.A., Edwards,R.A., Saha,S., Piro,V.C., Renard,B.Y., Pop,M., Klenk,H.P., Goker,M., Kyrpides,N.C., Woyke,T., Vorholt,J.A., Schulze-Lefert,P., Rubin,E.M., Darling,A.E., Rattei,T., McHardy,A.C. ( 2017 ) Critical Assessment of Metagenome Interpretation-a benchmark of metagenomics software Nat Methods 14 (11) :1063-1071.

https://www.ncbi.nlm.nih.gov/pubmed/28967888
2017 Falgenhauer,L., Ghosh,H., Doijad,S., Yao,Y., Bunk,B., Sproer,C., Kaase,M., Hilker,R., Overmann,J., Imirzalioglu,C., Chakraborty,T. ( 2017 ) Genome Analysis of the Carbapenem- and Colistin-Resistant Escherichia coli Isolate NRZ14408 Reveals Horizontal Gene Transfer Pathways towards Panresistance and Enhanced Virulence Antimicrob Agents Chemother 61 (4)

https://www.ncbi.nlm.nih.gov/pubmed/28096159