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Publications of the DSMZ

Here you will find a complete list of all scientific publications.

Publications
2017 Mukherjee,S., Seshadri,R., Varghese,N.J., Eloe-Fadrosh,E.A., Meier-Kolthoff,J.P., Goker,M., Coates,R.C., Hadjithomas,M., Pavlopoulos,G.A., Paez-Espino,D., Yoshikuni,Y., Visel,A., Whitman,W.B., Garrity,G.M., Eisen,J.A., Hugenholtz,P., Pati,A., Ivanova,N.N., Woyke,T., Klenk,H.P., Kyrpides,N.C. ( 2017 ) 1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life Nat Biotechnol 35 (7) :676-683.

https://www.ncbi.nlm.nih.gov/pubmed/28604660
2017 Ghosh,H., Bunk,B., Doijad,S., Schmiedel,J., Falgenhauer,L., Sproer,C., Imirzalioglu,C., Overmann,J., Chakraborty,T. ( 2017 ) Complete Genome Sequence of blaCTX-M-27-Encoding Escherichia coli Strain H105 of Sequence Type 131 Lineage C1/H30R Genome Announc 5 (31)

https://www.ncbi.nlm.nih.gov/pubmed/28774984
2017 Beyersmann,P.G., Tomasch,J., Son,K., Stocker,R., Goker,M., Wagner-Dobler,I., Simon,M., Brinkhoff,T. ( 2017 ) Dual function of tropodithietic acid as antibiotic and signaling molecule in global gene regulation of the probiotic bacterium Phaeobacter inhibens Sci Rep 7 (1) :730.

https://www.ncbi.nlm.nih.gov/pubmed/28389641
2017 Mannala,G.K., Hain,T., Sproer,C., Bunk,B., Overmann,J., Alt,V., Domann,E. ( 2017 ) Complete Genome and Plasmid Sequences of Staphylococcus aureus EDCC 5055 (DSM 28763), Used To Study Implant-Associated Infections Genome Announc 5 (8)

https://www.ncbi.nlm.nih.gov/pubmed/28232428
2017 deHoog,G.S., Dukik,K., Monod,M., Packeu,A., Stubbe,D., Hendrickx,M., Kupsch,C., Stielow,J.B., Freeke,J., Goker,M., Rezaei-Matehkolaei,A., Mirhendi,H., Graser,Y. ( 2017 ) Toward a Novel Multilocus Phylogenetic Taxonomy for the Dermatophytes Mycopathologia 182 (1-2) :5-31.

https://www.ncbi.nlm.nih.gov/pubmed/27783317
2017 Montero-Calasanz,M.D., Meier-Kolthoff,J.P., Zhang,D.F., Yaramis,A., Rohde,M., Woyke,T., Kyrpides,N.C., Schumann,P., Li,W.J., Goker,M. ( 2017 ) Genome-Scale Data Call for a Taxonomic Rearrangement of Geodermatophilaceae Frontiers in Microbiology 8

://WOS:000418265800001
2017 Nouioui,I., Goker,M., Carro,L., Montero-Calasanz,M.D., Rohde,M., Woyke,T., Kyrpides,N.C., Klenk,H.P. ( 2017 ) High quality draft genome of Nakamurella lactea type strain, a rock actinobacterium, and emended description of Nakamurella lactea Stand Genomic Sci 12 :4.

https://www.ncbi.nlm.nih.gov/pubmed/28074122
2017 Laviad-Shitrit,S., Goker,M., Huntemann,M., Clum,A., Pillay,M., Palaniappan,K., Varghese,N., Mikhailova,N., Stamatis,D., Reddy,T.B.K., Daum,C., Shapiro,N., Markowitz,V., Ivanova,N., Woyke,T., Klenk,H.P., Kyrpides,N.C., Halpern,M. ( 2017 ) High quality permanent draft genome sequence of Chryseobacterium bovis DSM 19482(T), isolated from raw cow milk Stand Genomic Sci 12 :31.

https://www.ncbi.nlm.nih.gov/pubmed/28491240
2017 Schmidt,I., Riedel,T., Schober,I., Bunk,B., Sproer,C., Bierbrodt,A., Lehnherr,H., Wittmann,J. ( 2017 ) Genome Sequence of Escherichia coli E28, a Multidrug-Resistant Strain Isolated from a Chicken Carcass, and Its Spontaneously Inducible Prophage Genome Announc 5 (22)

https://www.ncbi.nlm.nih.gov/pubmed/28572305
2017 Jiao,J.Y., Carro,L., Liu,L., Gao,X.Y., Zhang,X.T., Hozzein,W.N., Lapidus,A., Huntemann,M., Reddy,T.B.K., Varghese,N., Hadjithomas,M., Ivanova,N.N., Goker,M., Pillay,M., Eisen,J.A., Woyke,T., Klenk,H.P., Kyrpides,N.C., Li,W.J. ( 2017 ) Complete genome sequence of Jiangella gansuensis strain YIM 002(T) (DSM 44835(T)), the type species of the genus Jiangella and source of new antibiotic compounds Stand Genomic Sci 12 :21.

https://www.ncbi.nlm.nih.gov/pubmed/28174619
2017 Sonnenschein,E.C., Nielsen,K.F., D'Alvise,P., Porsby,C.H., Melchiorsen,J., Heilmann,J., Kalatzis,P.G., Lopez-Perez,M., Bunk,B., Sproer,C., Middelboe,M., Gram,L. ( 2017 ) Global occurrence and heterogeneity of the Roseobacter-clade species Ruegeria mobilis ISME J 11 (2) :588.

https://www.ncbi.nlm.nih.gov/pubmed/28117449
2017 vanIngen,J., Kohl,T.A., Kranzer,K., Hasse,B., Keller,P.M., KatarzynaSzafranska,A., Hillemann,D., Chand,M., Schreiber,P.W., Sommerstein,R., Berger,C., Genoni,M., Ruegg,C., Troillet,N., Widmer,A.F., Becker,S.L., Herrmann,M., Eckmanns,T., Haller,S., Holler,C., Debast,S.B., Wolfhagen,M.J., Hopman,J., Kluytmans,J., Langelaar,M., Notermans,D.W., TenOever,J., vandenBarselaar,P., Vonk,A.B.A., Vos,M.C., Ahmed,N., Brown,T., Crook,D., Lamagni,T., Phin,N., Smith,E.G., Zambon,M., Serr,A., Gotting,T., Ebner,W., Thurmer,A., Utpatel,C., Sproer,C., Bunk,B., Nübel,U., Bloemberg,G.V., Bottger,E.C., Niemann,S., Wagner,D., Sax,H. ( 2017 ) Global outbreak of severe Mycobacterium chimaera disease after cardiac surgery: a molecular epidemiological study Lancet Infect Dis 17 (10) :1033-1041.

https://www.ncbi.nlm.nih.gov/pubmed/28711585
2017 Hollensteiner,J., Poehlein,A., Sproer,C., Bunk,B., Sheppard,A.E., Rosenstiel,P., Schulenburg,H., Liesegang,H. ( 2017 ) Complete genome sequence of the nematicidal Bacillus thuringiensis MYBT18247 J Biotechnol 260 :48-52.

https://www.ncbi.nlm.nih.gov/pubmed/28899808
2017 Ahn,A.C., Meier-Kolthoff,J.P., Overmars,L., Richter,M., Woyke,T., Sorokin,D.Y., Muyzer,G. ( 2017 ) Genomic diversity within the haloalkaliphilic genus Thioalkalivibrio PLoS One 12 (3) :e0173517.

https://www.ncbi.nlm.nih.gov/pubmed/28282461
2017 Riedel,T., Wittmann,J., Bunk,B., Schober,I., Sproer,C., Gronow,S., Overmann,J. ( 2017 ) A Clostridioides difficile bacteriophage genome encodes functional binary toxin-associated genes J Biotechnol 250 :23-28.

https://www.ncbi.nlm.nih.gov/pubmed/28216103
2017 Wendling,C.C., Piecyk,A., Refardt,D., Chibani,C., Hertel,R., Liesegang,H., Bunk,B., Overmann,J., Roth,O. ( 2017 ) Tripartite species interaction: eukaryotic hosts suffer more from phage susceptible than from phage resistant bacteria BMC Evol Biol 17 (1) :98.

https://www.ncbi.nlm.nih.gov/pubmed/28399796
2017 Breider,S., Freese,H.M., Sproer,C., Simon,M., Overmann,J., Brinkhoff,T. ( 2017 ) Phaeobacter porticola sp nov., an antibiotic-producing bacterium isolated from a sea harbour International Journal of Systematic and Evolutionary Microbiology 67 (7) :2153-2159.

://WOS:000408263300013
2017 Dösselmann,B., Willmann,M., Steglich,M., Bunk,B., Nübel,U., Peter,S., Neher,R.A. ( 2017 ) Rapid and Consistent Evolution of Colistin Resistance in Extensively Drug-Resistant Pseudomonas aeruginosa during Morbidostat Culture Antimicrob Agents Chemother 61 (9)

https://www.ncbi.nlm.nih.gov/pubmed/28630206
2017 Garzetti,D., Brugiroux,S., Bunk,B., Pukall,R., McCoy,K.D., Macpherson,A.J., Stecher,B. ( 2017 ) High-Quality Whole-Genome Sequences of the Oligo-Mouse-Microbiota Bacterial Community Genome Announc 5 (42)

https://www.ncbi.nlm.nih.gov/pubmed/29051233
2017 Kublanov,I.V., Sigalova,O.M., Gavrilov,S.N., Lebedinsky,A.V., Rinke,C., Kovaleva,O., Chernyh,N.A., Ivanova,N., Daum,C., Reddy,T.B., Klenk,H.P., Spring,S., Goker,M., Reva,O.N., Miroshnichenko,M.L., Kyrpides,N.C., Woyke,T., Gelfand,M.S., Bonch-Osmolovskaya,E.A. ( 2017 ) Genomic Analysis of Caldithrix abyssi, the Thermophilic Anaerobic Bacterium of the Novel Bacterial Phylum Calditrichaeota Front Microbiol 8 :195.

https://www.ncbi.nlm.nih.gov/pubmed/28265262
2017 Riedel,T., Wetzel,D., Hofmann,J.D., Plorin,S., Dannheim,H., Berges,M., Zimmermann,O., Bunk,B., Schober,I., Sproer,C., Liesegang,H., Jahn,D., Overmann,J., Gross,U., Neumann-Schaal,M. ( 2017 ) High metabolic versatility of different toxigenic and non-toxigenic Clostridioides difficile isolates Int J Med Microbiol 307 (6) :311-320.

https://www.ncbi.nlm.nih.gov/pubmed/28619474
2017 Zautner,A.E., Bunk,B., Pfeifer,Y., Sproer,C., Reichard,U., Eiffert,H., Scheithauer,S., Gross,U., Overmann,J., Bohne,W. ( 2017 ) Monitoring microevolution of OXA-48-producing Klebsiella pneumoniae ST147 in a hospital setting by SMRT sequencing J Antimicrob Chemother 72 (10) :2737-2744.

https://www.ncbi.nlm.nih.gov/pubmed/29091199
2017 Matrosova,V.Y., Gaidamakova,E.K., Makarova,K.S., Grichenko,O., Klimenkova,P., Volpe,R.P., Tkavc,R., Ertem,G., Conze,I.H., Brambilla,E., Huntemann,M., Clum,A., Pillay,M., Palaniappan,K., Varghese,N., Mikhailova,N., Stamatis,D., Reddy,T., Daum,C., Shapiro,N., Ivanova,N., Kyrpides,N., Woyke,T., Daligault,H., Davenport,K., Erkkila,T., Goodwin,L.A., Gu,W., Munk,C., Teshima,H., Xu,Y., Chain,P., Woolbert,M., Gunde-Cimerman,N., Wolf,Y.I., Grebenc,T., Gostincar,C., Daly,M.J. ( 2017 ) High-quality genome sequence of the radioresistant bacterium Deinococcus ficus KS 0460 Stand Genomic Sci 12 :46.

https://www.ncbi.nlm.nih.gov/pubmed/28775794
2017 Birkeland,N.K., Schonheit,P., Poghosyan,L., Fiebig,A., Klenk,H.P. ( 2017 ) Complete genome sequence analysis of Archaeoglobus fulgidus strain 7324 (DSM 8774), a hyperthermophilic archaeal sulfate reducer from a North Sea oil field Stand Genomic Sci 12 :79.

https://www.ncbi.nlm.nih.gov/pubmed/29270248
2017 Dreiseikelmann,B., Bunk,B., Sproer,C., Rohde,M., Nimtz,M., Wittmann,J. ( 2017 ) Characterization and genome comparisons of three Achromobacter phages of the family Siphoviridae Arch Virol 162 (8) :2191-2201.

https://www.ncbi.nlm.nih.gov/pubmed/28357512
2017 BenHania,W., Joseph,M., Bunk,B., Sproer,C., Klenk,H.P., Fardeau,M.L., Spring,S. ( 2017 ) Characterization of the first cultured representative of a Bacteroidetes clade specialized on the scavenging of cyanobacteria Environ Microbiol 19 (3) :1134-1148.

https://www.ncbi.nlm.nih.gov/pubmed/27943642
2017 Stackebrandt,E., Smith,D. ( 2017 ) Expanding the 'Digital Protologue' database (DPD) to 'Archives of Microbiology': an offer to scientists and science Arch Microbiol 199 (4) :519-520.

https://www.ncbi.nlm.nih.gov/pubmed/28343315
2017 Nasr,S., Mohammadimehr,M., Vaghei,M.G., Amoozegar,M.A., Fazeli,S.A.S., Yurkov,A. ( 2017 ) Jaminaea pallidilutea sp nov (Microstromatales), a basidiomycetous yeast isolated from plant material of mangrove forests in Iran International Journal of Systematic and Evolutionary Microbiology 67 (11) :4405-4408.

://WOS:000414976000018
2017 Yurkov,A.M., Dauchy,D., Peter,G. ( 2017 ) Meyerozyma amylolytica sp nov from temperate deciduous trees and the transfer of five Candida species to the genus Meyerozyma International Journal of Systematic and Evolutionary Microbiology 67 (10) :3977-3981.

://WOS:000413484800045
2017 Wijayawardene,N.N., Hyde,K.D., Rajeshkumar,K.C., Hawksworth,D.L., Madrid,H., Kirk,P.M., Braun,U., Singh,R.V., Crous,P.W., Kukwa,M., Lucking,R., Kurtzman,C.P., Yurkov,A., Haelewaters,D., Aptroot,A., Lumbsch,H.T., Timdal,E., Ertz,D., Etayo,J., Phillips,A.J.L., Groenewald,J.Z., Papizadeh,M., Selbmann,L., Dayarathne,M.C., Weerakoon,G., Jones,E.B.G., Suetrong,S., Tian,Q., Castaneda-Ruiz,R.F., Bahkali,A.H., Pang,K.L., Tanaka,K., Dai,D.Q., Sakayaroj,J., Hujslova,M., Lombard,L., Shenoy,B.D., Suija,A., Maharachchikumbura,S.S.N., Thambugala,K.M., Wanasinghe,D.N., Sharma,B.O., Gaikwad,S., Pandit,G., Zucconi,L., Onofri,S., Egidi,E., Raja,H.A., Kodsueb,R., Caceres,M.E.S., Perez-Ortega,S., Fiuza,P.O., Monteiro,J.S., Vasilyeva,L.N., Shivas,R.G., Prieto,M., Wedin,M., Olariaga,I., Lateef,A.A., Agrawal,Y., Fazeli,S.A.S., Amoozegar,M.A., Zhao,G.Z., Pfliegler,W.P., Sharma,G., Oset,M., Abdel-Wahab,M.A., Takamatsu,S., Bensch,K., deSilva,N.I., DeKesel,A., Karunarathna,A., Boonmee,S., Pfister,D.H., Lu,Y.Z., Luo,Z.L., Boonyuen,N., Daranagama,D.A., Senanayake,I.C., Jayasiri,S.C., Samarakoon,M.C., Zeng,X.Y., Doilom,M., Quijada,L., Rampadarath,S., Heredia,G., Dissanayake,A.J., Jayawardana,R.S., Perera,R.H., Tang,L.Z., Phukhamsakda,C., Hernandez-Restrepo,M., Ma,X.Y., Tibpromma,S., Gusmao,L.F.P., Weerahewa,D., Karunarathna,S.C. ( 2017 ) Notes for genera: Ascomycota Fungal Diversity 86 (1) :1-594.

://WOS:000413448200001
2017 Pontes,A., Rohl,A., MaLdonado,C., Yurkov,A.M., Sampaio,J.P. ( 2017 ) Cryptotrichosporon argae sp nov., Cryptotrichosporon brontae sp nov and Cryptotrichosporon steropae sp nov., isolated from forest soils International Journal of Systematic and Evolutionary Microbiology 67 (9) :3610-3614.

://WOS:000417836100079
2017 Caton,L., Yurkov,A., Giesbers,M., Dijksterhuis,J., Ingham,C.J. ( 2017 ) Physically Triggered Morphology Changes in a Novel Acremonium Isolate Cultivated in Precisely Engineered Microfabricated Environments Frontiers in Microbiology 8

://WOS:000406157700002
2017 Brasch,J., Beck-Jendroscheck,V., Voss,K., Yurkov,A., Stchigel,A.M., Graser,Y. ( 2017 ) Xanthothecium peruvianum isolated from human stratum corneum: A case report, characterisation and short review that suggest emendation of Arachnomyces peruvianus Mycoses 60 (7) :469-476.

://WOS:000403324200008
2017 Schulz,M., Sicker,D., Schackow,O., Hennig,L., Yurkov,A., Siebers,M., Hofmann,D., Disko,U., Ganimede,C., Mondani,L., Tabaglio,V., Marocco,A. ( 2017 ) Interspecies-cooperations of abutilon theophrasti with root colonizing microorganisms disarm BOA-OH allelochemicals Plant Signaling & Behavior 12 (8)

://WOS:000428142500015
2017 Adriaenssens,E.M., Krupovic,M., Knezevic,P., Ackermann,H.W., Barylski,J., Brister,J.R., Clokie,M.R., Duffy,S., Dutilh,B.E., Edwards,R.A., Enault,F., Jang,H.B., Klumpp,J., Kropinski,A.M., Lavigne,R., Poranen,M.M., Prangishvili,D., Rumnieks,J., Sullivan,M.B., Wittmann,J., Oksanen,H.M., Gillis,A., Kuhn,J.H. ( 2017 ) Taxonomy of prokaryotic viruses: 2016 update from the ICTV bacterial and archaeal viruses subcommittee Arch Virol 162 (4) :1153-1157.

https://www.ncbi.nlm.nih.gov/pubmed/28040838
2017 Avci,B., Hahnke,R.L., Chafee,M., Fischer,T., Gruber-Vodicka,H., Tegetmeyer,H.E., Harder,J., Fuchs,B.M., Amann,R.I., Teeling,H. ( 2017 ) Genomic and physiological analyses of 'Reinekea forsetii' reveal a versatile opportunistic lifestyle during spring algae blooms Environ Microbiol 19 (3) :1209-1221.

https://www.ncbi.nlm.nih.gov/pubmed/28000419
2017 Beblo-Vranesevic,K., Bohmeier,M., Perras,A.K., Schwendner,P., Rabbow,E., Moissl-Eichinger,C., Cockell,C.S., Pukall,R., Vannier,P., Marteinsson,V.T., Monaghan,E.P., Ehrenfreund,P., Garcia-Descalzo,L., Gomez,F., Malki,M., Amils,R., Gaboyer,F., Westall,F., Cabezas,P., Walter,N., Rettberg,P. ( 2017 ) The responses of an anaerobic microorganism, Yersinia intermedia MASE-LG-1 to individual and combined simulated Martian stresses PLoS One 12 (10) :e0185178.

https://www.ncbi.nlm.nih.gov/pubmed/29069099
2017 Herbold,C.W., Lehtovirta-Morley,L.E., Jung,M.Y., Jehmlich,N., Hausmann,B., Han,P., Loy,A., Pester,M., Sayavedra-Soto,L.A., Rhee,S.K., Prosser,J.I., Nicol,G.W., Wagner,M., Gubry-Rangin,C. ( 2017 ) Ammonia-oxidising archaea living at low pH: Insights from comparative genomics Environ Microbiol 19 (12) :4939-4952.

https://www.ncbi.nlm.nih.gov/pubmed/29098760
2017 Koskinen,K., Rettberg,P., Pukall,R., Auerbach,A., Wink,L., Barczyk,S., Perras,A., Mahnert,A., Margheritis,D., Kminek,G., Moissl-Eichinger,C. ( 2017 ) Microbial biodiversity assessment of the European Space Agency's ExoMars 2016 mission Microbiome 5 (1) :143.

https://www.ncbi.nlm.nih.gov/pubmed/29070062
2017 Huber,K.J., Geppert,A.M., Gross,U., Luckner,M., Wanner,G., Cooper,P., Abakah,J., Janssen,I., Overmann,J. ( 2017 ) Aridibacter nitratireducens sp nov., a member of the family Blastocatellaceae, class Blastocatellia, isolated from an African soil International Journal of Systematic and Evolutionary Microbiology 67 (11) :4487-4493.

://WOS:000414976000031
2017 MacLeod,R.A., Kaufmann,M.E., Drexler,H.G. ( 2017 ) Cytogenetic Harvesting of Cancer Cells and Cell Lines Methods Mol Biol 1541 :43-58.

https://www.ncbi.nlm.nih.gov/pubmed/27910013
2017 Palau,A., Mallo,M., Palomo,L., Rodriguez-Hernandez,I., Diesch,J., Campos,D., Granada,I., Junca,J., Drexler,H.G., Sole,F., Buschbeck,M. ( 2017 ) Immunophenotypic, cytogenetic, and mutational characterization of cell lines derived from myelodysplastic syndrome patients after progression to acute myeloid leukemia Genes Chromosomes Cancer 56 (3) :243-252.

https://www.ncbi.nlm.nih.gov/pubmed/27750403
2017 Tindall,B.J. ( 2017 ) Clarifying the limitations on Rule 18a and Rule 30 of the International Code of Nomenclature of Prokaryotes International Journal of Systematic and Evolutionary Microbiology 67 (2) :505-506.

://WOS:000397002800052
2017 Drexler,H.G., Dirks,W.G., MacLeod,R.A., Uphoff,C.C. ( 2017 ) False and mycoplasma-contaminated leukemia-lymphoma cell lines: time for a reappraisal Int J Cancer 140 (5) :1209-1214.

https://www.ncbi.nlm.nih.gov/pubmed/27870004
2017 Tindall,B.J., Sutton,G., Garrity,G.M. ( 2017 ) Enterobacter aerogenes Hormaeche and Edwards 1960 (Approved Lists 1980) and Klebsiella mobilis Bascomb et al. 1971 (Approved Lists 1980) share the same nomenclatural type (ATCC 13048) on the Approved Lists and are homotypic synonyms, with consequences for the name Klebsiella mobilis Bascomb et al. 1971 (Approved Lists 1980) International Journal of Systematic and Evolutionary Microbiology 67 (2) :502-504.

://WOS:000397002800051
2017 Nagel,S., Pommerenke,C., Scherr,M., Meyer,C., Kaufmann,M., Battmer,K., MacLeod,R.A., Drexler,H.G. ( 2017 ) NKL homeobox gene activities in hematopoietic stem cells, T-cell development and T-cell leukemia PLoS One 12 (2) :e0171164.

https://www.ncbi.nlm.nih.gov/pubmed/28151996
2017 Tindall,B.J. ( 2017 ) The consequences of Bacillus axarquiensis Ruiz-Garcia et al. 2005, Bacillus malacitensis Ruiz-Garcia et al. 2005 and Brevibacterium halotolerans Delaporte and Sasson 1967 (Approved Lists 1980) being treated as heterotypic synonyms International Journal of Systematic and Evolutionary Microbiology 67 (1) :175-176.

://WOS:000396035500031
2017 Nagel,S., Pommerenke,C., Meyer,C., Kaufmann,M., MacLeod,R.A.F., Drexler,H.G. ( 2017 ) Identification of a tumor suppressor network in T-cell leukemia Leuk Lymphoma 58 (9) :2196-2207.

https://www.ncbi.nlm.nih.gov/pubmed/28142295
2017 Pereira,P.H.F., Macrae,A., Reinert,F., deSouza,R.F., Coelho,R.R.R., Potter,G., Klenk,H.P., Labeda,D.P. ( 2017 ) Streptomyces odonnellii sp nov., a proteolytic streptomycete isolated from soil under cerrado (savanna) vegetation cover International Journal of Systematic and Evolutionary Microbiology 67 (12) :5211-5215.

://WOS:000417933700051
2017 Daniele,G., Simonetti,G., Fusilli,C., Iacobucci,I., Lonoce,A., Palazzo,A., Lomiento,M., Mammoli,F., Marsano,R.M., Marasco,E., Mantovani,V., Quentmeier,H., Drexler,H.G., Ding,J., Palumbo,O., Carella,M., Nadarajah,N., Perricone,M., Ottaviani,E., Baldazzi,C., Testoni,N., Papayannidis,C., Ferrari,S., Mazza,T., Martinelli,G., Storlazzi,C.T. ( 2017 ) Epigenetically induced ectopic expression of UNCX impairs the proliferation and differentiation of myeloid cells Haematologica 102 (7) :1204-1214.

https://www.ncbi.nlm.nih.gov/pubmed/28411256
2017 Nouioui,I., Sangal,V., Carro,L., Teramoto,K., Jando,M., Montero-Calasanz,M.D., Igual,J.M., Sutcliffe,I., Goodfellow,M., Klenk,H.P. ( 2017 ) Two novel species of rapidly growing mycobacteria: Mycobacterium lehmannii sp nov and Mycobacterium neumannii sp nov. International Journal of Systematic and Evolutionary Microbiology 67 (12) :4948-4955.

://WOS:000417933700011
2017 AitGhezali,L., Arbabian,A., Roudot,H., Brouland,J.P., Baran-Marszak,F., Salvaris,E., Boyd,A., Drexler,H.G., Enyedi,A., Letestu,R., Varin-Blank,N., Papp,B. ( 2017 ) Induction of endoplasmic reticulum calcium pump expression during early leukemic B cell differentiation J Exp Clin Cancer Res 36 (1) :87.

https://www.ncbi.nlm.nih.gov/pubmed/28651627
2017 Nouioui,I., Carro,L., Teramoto,K., Igual,J.M., Jando,M., Montero-Calasanz,M.D., Sutcliffe,I., Sangal,V., Goodfellow,M., Klenk,H.P. ( 2017 ) Mycobacterium eburneum sp nov., a non-chromogenic, fast-growing strain isolated from sputum International Journal of Systematic and Evolutionary Microbiology 67 (9) :3174-3181.

://WOS:000417836100006
2017 Ehrentraut,S., Nagel,S., Pommerenke,C., Dirks,W.G., Quentmeier,H., Kaufmann,M., Meyer,C., Zaborski,M., Geffers,R., Fujiwara,H., Drexler,H.G., MacLeod,R.A.F. ( 2017 ) Peripheral T-cell lymphoma cell line T8ML-1 highlights conspicuous targeting of PVRL2 by t(14;19)(q11.2;q13.3) Haematologica 102 (9) :e356-e359.

https://www.ncbi.nlm.nih.gov/pubmed/28659334
2017 Hahn,M.W., Koll,U., Karbon,G., Schmidt,J., Lang,E. ( 2017 ) Polynucleobacter aenigmaticus sp. nov. isolated from the permanently anoxic monimolimnion of a temperate meromictic lake Int J Syst Evol Microbiol 67 (11) :4646-4654.

https://www.ncbi.nlm.nih.gov/pubmed/29022553
2017 Jawhar,M., Naumann,N., Knut,M., Score,J., Ghazzawi,M., Schneider,B., Kreuzer,K.A., Hallek,M., Drexler,H.G., Chacko,J., Wallis,L., Fabarius,A., Metzgeroth,G., Hofmann,W.K., Chase,A., Tapper,W., Reiter,A., Cross,N.C.P. ( 2017 ) Cytogenetically cryptic ZMYM2-FLT3 and DIAPH1-PDGFRB gene fusions in myeloid neoplasms with eosinophilia Leukemia 31 (10) :2271-2273.

https://www.ncbi.nlm.nih.gov/pubmed/28751768
2017 Hahn,M.W., Karbon,G., Koll,U., Schmidt,J., Lang,E. ( 2017 ) Polynucleobacter sphagniphilus sp. nov. a planktonic freshwater bacterium isolated from an acidic and humic freshwater habitat Int J Syst Evol Microbiol 67 (9) :3261-3267.

https://www.ncbi.nlm.nih.gov/pubmed/28829016
2017 Nagel,S., Pommerenke,C., Meyer,C., Kaufmann,M., MacLeod,R.A.F., Drexler,H.G. ( 2017 ) NKL homeobox gene MSX1 acts like a tumor suppressor in NK-cell leukemia Oncotarget 8 (40) :66815-66832.

https://www.ncbi.nlm.nih.gov/pubmed/28977998
2017 Hahn,M.W., Huymann,L.R., Koll,U., Schmidt,J., Lang,E., Hoetzinger,M. ( 2017 ) Polynucleobacter wuianus sp. nov., a free-living freshwater bacterium affiliated with the cryptic species complex PnecC Int J Syst Evol Microbiol 67 (2) :379-385.

https://www.ncbi.nlm.nih.gov/pubmed/27902302
2017 ChaabaneChaouch,F., Bouras,N., Mokrane,S., Bouznada,K., Zitouni,A., Potter,G., Sproer,C., Klenk,H.P., Sabaou,N. ( 2017 ) Planomonospora algeriensis sp. nov., an actinobacterium isolated from a Saharan soil of Algeria Antonie Van Leeuwenhoek 110 (2) :245-252.

https://www.ncbi.nlm.nih.gov/pubmed/27803992
2017 Choi,D.H., Jang,G.I., Lapidus,A., Copeland,A., Reddy,T.B.K., Mukherjee,S., Huntemann,M., Varghese,N., Ivanova,N., Pillay,M., Tindall,B.J., Goker,M., Woyke,T., Klenk,H.P., Kyrpides,N.C., Cho,B.C. ( 2017 ) Draft genome sequence of Marinobacterium rhizophilum CL-YJ9(T) (DSM 18822(T)), isolated from the rhizosphere of the coastal tidal-flat plant Suaeda japonica Stand Genomic Sci 12 :65.

https://www.ncbi.nlm.nih.gov/pubmed/29093768
2017 Panschin,I., Becher,M., Verbarg,S., Sproer,C., Rohde,M., Schuler,M., Amann,R.I., Harder,J., Tindall,B.J., Hahnke,R.L. ( 2017 ) Description of Gramella forsetii sp nov., a marine Flavobacteriaceae isolated from North Sea water, and emended description of Gramella gaetbulicola Cho et al. 2011 International Journal of Systematic and Evolutionary Microbiology 67 (3) :697-703.

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2017 Schumann,P., Pukall,R. ( 2017 ) Leucobacter weissii sp nov., an isolate from activated sludge once described as first representative of the peptidoglycan variation B2 delta, and emended description of the genus Leucobacter International Journal of Systematic and Evolutionary Microbiology 67 (12) :5244-5251.

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2017 Steglich,M., Nübel,U. ( 2017 ) The challenge of detecting indels in bacterial genomes from short-read sequencing data J. Biotechnol. 250 :11-15.

2017 vanIngen,J., Kohl,T.A., Kranzer,K., Hasse,B., Keller,P., Szafranska,A.K., Hilleman,D., Chand,M., Schreiber,P.W., Sommerstein,R., Berger,C., Genoni,M., Rüegg,C., Troillet,N., Widmer,A.F., Becker,S., Herrmann,M., Eckmanns,T., Haller,S., Höller,C., Debast,S.B., Wolfhagen,M.J., Hopman,J., Kluytmans,J., Langelaar,M., Notermans,D.W., tenOever,J., vandenBaarselaar,P., Vonk,A.B., Vos,M.C., Ahmed,N., Brown,T., Crook,D., Lamagni,T., Phin,N., Smith,G., Zambon,M., Serr,A., Götting,T., Ebner,W., Thürmer,A., Utpatel,C., Spröer,C., Bunk,B., Nübel,U., Bloemberg,G.V., Böttger,E.C., Niemann,S., Wagner,D., Sax,H. ( 2017 ) Global outbreak of severe Mycobacterium chimaera disease after cardiac surgery: a molecular epidemiological study The Lancet Infectious Diseases S1473-3099(17) :30324-9.

2017 Gerlach,R.G., Walter,S., McClelland,M., Schmidt,C., Steglich,M., Prager,R., Bender,J.K., Fuchs,S., Schoerner,C., Rabsch,W., Lang,W., Jantsch,J. ( 2017 ) Comparative whole genome analysis of three consecutive Salmonella diarizonae isolates Int J Med Microbiol 307 (8) :542-551.

http://www.ncbi.nlm.nih.gov/pubmed/28939438
2017 Dam,H.T., Vollmers,J., Kaster,A.K., Haggblom,M.M. ( 2017 ) Reconstructed genomes of novel Dehalococcoides mccartyi strains from 1,2,3,4-tetrachlorodibenzo-p-dioxin-dechlorinating enrichment cultures reveal divergent reductive dehalogenase gene profiles FEMS Microbiol Ecol 93 (12)

https://www.ncbi.nlm.nih.gov/pubmed/29112726
2017 Shang,Y., Sikorski,J., Bonkowski,M., Fiore-Donno,A.-M., Kandeler,E., Marhan,S., Boeddinghaus,R.S., Solly,E.F., Schrumpf,M., Schöning,I., Wubet,T., Buscot,F., Overmann,J. ( 2017 ) Inferring interactions in complex microbial communities from nucleotide sequence data and environmental parameters PLOS ONE 12 (3) :e0173765.

http://dx.doi.org/10.1371%2Fjournal.pone.0173765
2017 Leimbach,A., Poehlein,A., Vollmers,J., Gorlich,D., Daniel,R., Dobrindt,U. ( 2017 ) No evidence for a bovine mastitis Escherichia coli pathotype BMC Genomics 18 (1) :359.

https://www.ncbi.nlm.nih.gov/pubmed/28482799
2017 Overmann,J., Scholz,A.H. ( 2017 ) Microbiological Research Under the Nagoya Protocol: Facts and Fiction Trends Microbiol 25 (2) :85-88.

https://www.ncbi.nlm.nih.gov/pubmed/27887771
2017 Guo,H., Benndorf,R., Leichnitz,D., Klassen,J.L., Vollmers,J., Gorls,H., Steinacker,M., Weigel,C., Dahse,H.M., Kaster,A.K., deBeer,Z.W., Poulsen,M., Beemelmanns,C. ( 2017 ) Isolation, Biosynthesis and Chemical Modifications of Rubterolones A-F: Rare Tropolone Alkaloids from Actinomadura sp. 5-2 Chemistry 23 (39) :9338-9345.

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2017 Reimer,L.C., Will,S.E., Schomburg,D. ( 2017 ) The fate of lysine: Non-targeted stable isotope analysis reveals parallel ways for lysine catabolization in Phaeobacter inhibens PLoS One 12 (10) :e0186395.

https://www.ncbi.nlm.nih.gov/pubmed/29059219
2017 Vollmers,J., Frentrup,M., Rast,P., Jogler,C., Kaster,A.K. ( 2017 ) Untangling Genomes of Novel Planctomycetal and Verrucomicrobial Species from Monterey Bay Kelp Forest Metagenomes by Refined Binning Front Microbiol 8 :472.

https://www.ncbi.nlm.nih.gov/pubmed/28424662
2017 Petersen,J., Wagner-Dobler,I. ( 2017 ) Plasmid Transfer in the Ocean - A Case Study from the Roseobacter Group Front Microbiol 8 :1350.

https://www.ncbi.nlm.nih.gov/pubmed/28769910
2017 Vollmers,J., Wiegand,S., Kaster,A.K. ( 2017 ) Comparing and Evaluating Metagenome Assembly Tools from a Microbiologist's Perspective - Not Only Size Matters! PLoS One 12 (1) :e0169662.

https://www.ncbi.nlm.nih.gov/pubmed/28099457
2017 Freese,H.M., Methner,A., Overmann,J. ( 2017 ) Adaptation of Surface-Associated Bacteria to the Open Ocean: A Genomically Distinct Subpopulation of Phaeobacter gallaeciensis Colonizes Pacific Mesozooplankton Front Microbiol 8 :1659.

https://www.ncbi.nlm.nih.gov/pubmed/28912769
2017 Song,Y., Kaster,A.K., Vollmers,J., Song,Y., Davison,P.A., Frentrup,M., Preston,G.M., Thompson,I.P., Murrell,J.C., Yin,H., Hunter,C.N., Huang,W.E. ( 2017 ) Single-cell genomics based on Raman sorting reveals novel carotenoid-containing bacteria in the Red Sea Microb Biotechnol 10 (1) :125-137.

https://www.ncbi.nlm.nih.gov/pubmed/27748032
2017 Overmann,J., Abt,B., Sikorski,J. ( 2017 ) Present and Future of Culturing Bacteria Annu Rev Microbiol 71 :711-730.

https://www.ncbi.nlm.nih.gov/pubmed/28731846
2017 Pascual,J., vonHoermann,C., Rottler-Hoermann,A.M., Nevo,O., Geppert,A., Sikorski,J., Huber,K.J., Steiger,S., Ayasse,M., Overmann,J. ( 2017 ) Function of bacterial community dynamics in the formation of cadaveric semiochemicals during in situ carcass decomposition Environ Microbiol 19 (8) :3310-3322.

https://www.ncbi.nlm.nih.gov/pubmed/28631411
2017 Boedeker,C., Schuler,M., Reintjes,G., Jeske,O., vanTeeseling,M.C., Jogler,M., Rast,P., Borchert,D., Devos,D.P., Kucklick,M., Schaffer,M., Kolter,R., vanNiftrik,L., Engelmann,S., Amann,R., Rohde,M., Engelhardt,H., Jogler,C. ( 2017 ) Determining the bacterial cell biology of Planctomycetes Nat Commun 8 :14853.

https://www.ncbi.nlm.nih.gov/pubmed/28393831
2017 Lagkouvardos,I., Overmann,J., Clavel,T. ( 2017 ) Cultured microbes represent a substantial fraction of the human and mouse gut microbiota Gut Microbes 8 (5) :493-503.

https://www.ncbi.nlm.nih.gov/pubmed/28418756
2017 Rast,P., Glockner,I., Boedeker,C., Jeske,O., Wiegand,S., Reinhardt,R., Schumann,P., Rohde,M., Spring,S., Glockner,F.O., Jogler,C., Jogler,M. ( 2017 ) Three Novel Species with Peptidoglycan Cell Walls form the New Genus Lacunisphaera gen. nov. in the Family Opitutaceae of the Verrucomicrobial Subdivision 4 Front Microbiol 8 :202.

https://www.ncbi.nlm.nih.gov/pubmed/28243229
2017 Irisarri,I., Baurain,D., Brinkmann,H., Delsuc,F., Sire,J.Y., Kupfer,A., Petersen,J., Jarek,M., Meyer,A., Vences,M., Philippe,H. ( 2017 ) Phylotranscriptomic consolidation of the jawed vertebrate timetree Nat Ecol Evol 1 (9) :1370-1378.

https://www.ncbi.nlm.nih.gov/pubmed/28890940
2017 Damste,J.S.S., Rijpstra,W.I.C., Dedysh,S.N., Foesel,B.U., Villanueva,L. ( 2017 ) Pheno- and Genotyping of Hopanoid Production in Acidobacteria Front Microbiol 8 :968.

https://www.ncbi.nlm.nih.gov/pubmed/28642737
2017 Falagan,C., Foesel,B., Johnson,B. ( 2017 ) Acidicapsa ferrireducens sp. nov., Acidicapsa acidiphila sp. nov., and Granulicella acidiphila sp. nov.: novel acidobacteria isolated from metal-rich acidic waters Extremophiles 21 (3) :459-469.

https://www.ncbi.nlm.nih.gov/pubmed/28229259
2017 Dickschat,J.S., Rinkel,J., Klapschinski,T., Petersen,J. ( 2017 ) Characterisation of the l-Cystine beta-Lyase PatB from Phaeobacter inhibens: An Enzyme Involved in the Biosynthesis of the Marine Antibiotic Tropodithietic Acid Chembiochem 18 (22) :2260-2267.

https://www.ncbi.nlm.nih.gov/pubmed/28895253
2017 Beaudry,F.E.G., Iwanicki,T.W., Mariluz,B.R.Z., Darnet,S., Brinkmann,H., Schneider,P., Taylor,J.S. ( 2017 ) The non-visual opsins: eighteen in the ancestor of vertebrates, astonishing increase in ray-finned fish, and loss in amniotes J Exp Zool B Mol Dev Evol 328 (7) :685-696.

https://www.ncbi.nlm.nih.gov/pubmed/29059507
2017 Krapp,S., Schuy,C., Greiner,E., Stephan,I., Alberter,B., Funk,C., Marschall,M., Wege,C., Bailer,S.M., Kleinow,T., Krenz,B. ( 2017 ) Begomoviral Movement Protein Effects in Human and Plant Cells: Towards New Potential Interaction Partners. Viruses 11 (E334)

2017 Bajerski,F., Wagner,D., Mangelsdorf,K. ( 2017 ) Cell Membrane Fatty Acid Composition of Chryseobacterium frigidisoli PB4(T), Isolated from Antarctic Glacier Forefield Soils, in Response to Changing Temperature and pH Conditions Front Microbiol 8 :677.

https://www.ncbi.nlm.nih.gov/pubmed/28469614
2017 Donner,J., Reck,M., Bunk,B., Jarek,M., App,C.B., Meier-Kolthoff,J.P., Overmann,J., Muller,R., Kirschning,A., Wagner-Dobler,I. ( 2017 ) The Biofilm Inhibitor Carolacton Enters Gram-Negative Cells: Studies Using a TolC-Deficient Strain of Escherichia coli mSphere 2 (5)

https://www.ncbi.nlm.nih.gov/pubmed/28959742
2017 Reimer,L.C., Sohngen,C., Vetcininova,A., Overmann,J. ( 2017 ) Mobilization and integration of bacterial phenotypic data-Enabling next generation biodiversity analysis through the BacDive metadatabase J Biotechnol 261 :187-193.

https://www.ncbi.nlm.nih.gov/pubmed/28487186
2017 Dedysh,S.N., Kulichevskaya,I.S., Huber,K.J., Overmann,J. ( 2017 ) Defining the taxonomic status of described subdivision 3 Acidobacteria: proposal of Bryobacteraceae fam. nov. International Journal of Systematic and Evolutionary Microbiology 67 (2) :498-501.

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2017 Pascual,J., Foesel,B.U., Geppert,A., Huber,K.J., Overmann,J. ( 2017 ) Flaviaesturariibacter luteus sp nov., isolated from an agricultural floodplain soil, and emended description of the genus Flaviaesturariibacter International Journal of Systematic and Evolutionary Microbiology 67 (6) :1727-1734.

://WOS:000405503800019
2017 Sonnenschein,E.C., Phippen,C.B.W., Nielsen,K.F., Mateiu,R.V., Melchiorsen,J., Gram,L., Overmann,J., Freese,H.M. ( 2017 ) Phaeobacter piscinae sp nov., a species of the Roseobacter group and potential aquaculture probiont International Journal of Systematic and Evolutionary Microbiology 67 (11) :4559-4564.

://WOS:000414976000042
2017 Dannheim,H., Riedel,T., Neumann-Schaal,M., Bunk,B., Schober,I., Sproer,C., Chibani,C.M., Gronow,S., Liesegang,H., Overmann,J., Schomburg,D. ( 2017 ) Manual curation and reannotation of the genomes of Clostridium difficile 630Deltaerm and C. difficile 630 J Med Microbiol 66 (3) :286-293.

https://www.ncbi.nlm.nih.gov/pubmed/28357980
2017 Vieira,S., Luckner,M., Wanner,G., Overmann,J. ( 2017 ) Luteitalea pratensis gen. nov., sp nov a new member of subdivision 6 Acidobacteria isolated from temperate grassland soil International Journal of Systematic and Evolutionary Microbiology 67 (5) :1408-1414.

://WOS:000403696100045
2017 Freese,H.M., Sikorski,J., Bunk,B., Scheuner,C., Meier-Kolthoff,J.P., Sproer,C., Gram,L., Overmann,J. ( 2017 ) Trajectories and Drivers of Genome Evolution in Surface-Associated Marine Phaeobacter Genome Biol Evol 9 (12) :3297-3311.

https://www.ncbi.nlm.nih.gov/pubmed/29194520
2017 Riedl,S., Brown,R.K., Klockner,S., Huber,K.J., Bunk,B., Overmann,J., Schroder,U. ( 2017 ) Successive Conditioning in Complex Artificial Wastewater Increases the Performance of Electrochemically Active Biofilms Treating Real Wastewater Chemelectrochem 4 (12) :3081-3090.

://WOS:000419269000009
2017 Bartling,P., Brinkmann,H., Bunk,B., Overmann,J., Goker,M., Petersen,J. ( 2017 ) The Composite 259-kb Plasmid of Martelella mediterranea DSM 17316(T)-A Natural Replicon with Functional RepABC Modules from Rhodobacteraceae and Rhizobiaceae Front Microbiol 8 :1787.

https://www.ncbi.nlm.nih.gov/pubmed/28983283
2017 ChaibDeMares,M., Sipkema,D., Huang,S., Bunk,B., Overmann,J., vanElsas,J.D. ( 2017 ) Host Specificity for Bacterial, Archaeal and Fungal Communities Determined for High- and Low-Microbial Abundance Sponge Species in Two Genera Front Microbiol 8 :2560.

https://www.ncbi.nlm.nih.gov/pubmed/29326681