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Publications of the DSMZ

Here you will find a complete list of all scientific publications.

Publications
2014 Foesel,B.U., Nagele,V., Naether,A., Wust,P.K., Weinert,J., Bonkowski,M., Lohaus,G., Polle,A., Alt,F., Oelmann,Y., Fischer,M., Friedrich,M.W., Overmann,J. ( 2014 ) Determinants of Acidobacteria activity inferred from the relative abundances of 16S rRNA transcripts in German grassland and forest soils Environmental microbiology 16 (3) :658-675.

http://www.ncbi.nlm.nih.gov/pubmed/23802854

2014 Krebes,J., Morgan,R.D., Bunk,B., Spröer,C., Luong,K., Parusel,R., Anton,B.P., König,C., Josenhans,C., Overmann,J., Roberts,R.J., Korlach,J., Suerbaum,S. ( 2014 ) The complex methylome of the human gastric pathogen Helicobacter pylori Nucleic acids research 42 (4) :2415-2432.

http://www.ncbi.nlm.nih.gov/pubmed/24302578

2014 Kosowski,K., Schmidt,M., Pukall,R., Hause,G., Kämpfer,P., Lechner,U. ( 2014 ) Bacillus pervagus sp. nov. and Bacillus andreesenii sp. nov., isolated from a composting reactor International journal of systematic and evolutionary microbiology 64 (Pt 1) :88-94.

http://www.ncbi.nlm.nih.gov/pubmed/24021730

2014 Tindall,B.J. ( 2014 ) The correct name of the taxon that contains the type strain of Rhodococcus equi International journal of systematic and evolutionary microbiology 64 (Pt 1) :302-308.

http://www.ncbi.nlm.nih.gov/pubmed/24408951

2014 Tindall,B.J. ( 2014 ) The family name Solimonadaceae Losey et al. 2013 is illegitimate, proposals to create the names 'Sinobacter soli' comb. nov. and 'Sinobacter variicoloris' contravene the Code, the family name Xanthomonadaceae Saddler and Bradbury 2005 and the order name Xanthomonadales Saddler and Bradbury 2005 are illegitimate and notes on the application of the family names Solibacteraceae Zhou et al. 2008, Nevskiaceae Henrici and Johnson 1935 (Approved Lists 1980) and Lysobacteraceae Christensen and Cook 1978 (Approved Lists 1980) and order name Lysobacteriales Christensen and Cook 1978 (Approved Lists 1980) with respect to the classification of the corresponding type genera Solibacter Zhou et al. 2008, Nevskia Famintzin 1892 (Approved Lists 1980) and Lysobacter Christensen and Cook 1978 (Approved Lists 1980) and importance of accurately expressing the link between a taxonomic name, its authors and the corresponding description/circumscription/emendation International journal of systematic and evolutionary microbiology 64 (Pt 1) :293-297.

http://www.ncbi.nlm.nih.gov/pubmed/24408949

2014 Druppel,K., Hensler,M., Trautwein,K., Kossmehl,S., Wohlbrand,L., Schmidt-Hohagen,K., Ulbrich,M., Bergen,N., Meier-Kolthoff,J.P., Göker,M., Klenk,H.P., Schomburg,D., Rabus,R. ( 2014 ) Pathways and substrate-specific regulation of amino acid degradation in Phaeobacter inhibens DSM 17395 (archetype of the marine Roseobacter clade) Environmental microbiology 16 (1) :218-238.

http://www.ncbi.nlm.nih.gov/pubmed/24165547

2014 SinningheDamsté,J.S., Rijpstra,W.I.C., Hopmans,E.C., Foesel,B.U., Wüst,P.K., Overmann,J., Tank,M., Bryant,D.A., Dunfield,P.F., Houghton,K., Stott,M.B. ( 2014 ) Ether- and Ester-Bound iso-Diabolic Acid and Other Lipids in Members of Acidobacteria Subdivision 4 Applied and Environmental Microbiology 80 (17) :5207-5218.

http://aem.asm.org/content/80/17/5207.abstract
2014 Saker,R., Bouras,N., Zitouni,A., Ghoul,M., Rohde,M., Schumann,P., Spröer,C., Sabaou,N., Klenk,H.P. ( 2014 ) Mzabimyces algeriensis gen. nov., sp. nov., a halophilic filamentous actinobacterium isolated from a Saharan soil, and proposal of Mzabimycetaceae fam. nov Antonie Van Leeuwenhoek

http://www.ncbi.nlm.nih.gov/pubmed/25186951
2014 Riedel,T., Spring,S., Fiebig,A., Petersen,J., Kyrpides,N.C., Göker,M., Klenk,H.P. ( 2014 ) Genome sequence of the exopolysaccharide-producing Salipiger mucosus type strain (DSM 16094(T)), a moderately halophilic member of the Roseobacter clade Standards in genomic sciences 9 (3) :1333-1345.

http://www.ncbi.nlm.nih.gov/pubmed/25197501
2014 Saricaoglu,S., Isik,K., Veyisoglu,A., Saygin,H., Cetin,D., Guven,K., Spröer,C., Klenk,H.P., Sahin,N. ( 2014 ) Streptomyces burgazadensis sp. nov., isolated from soil International journal of systematic and evolutionary microbiology

http://www.ncbi.nlm.nih.gov/pubmed/25237147
2014 Csotonyi,J.T., Maltman,C., Swiderski,J., Stackebrandt,E., Yurkov,V. ( 2014 ) Extremely 'vanadiphilic' multiply metal-resistant and halophilic aerobic anoxygenic phototrophs, strains EG13 and EG8, from hypersaline springs in Canada Extremophiles : life under extreme conditions

http://www.ncbi.nlm.nih.gov/pubmed/25209747
2014 Vaishampayan,P., Roberts,A., Augustus,A., Pukall,R., Schumann,P., Schwendner,P., Mayilraj,S., Salmassi,T., Venkateswaran,K. ( 2014 ) Deinococcus phoenicis sp. nov., an extreme ionizing radiation resistant bacterium isolated from the Phoenix Lander assembly facility International journal of systematic and evolutionary microbiology

http://www.ncbi.nlm.nih.gov/pubmed/25030518
2014 Mohammadipanah,F., Hamedi,J., Spröer,C., CarmenMontero-Calasan,M.D., Schumann,P., Klenk,H.P. ( 2014 ) Promicromonospora iranensis sp. nov., an actinobacterium isolated from rhizospheric soil International journal of systematic and evolutionary microbiology

http://www.ncbi.nlm.nih.gov/pubmed/25006218
2014 Mohammadipanah,F., Hamedi,J., Spröer,C., Rohde,M., Montero-Calasanz,M.D., Klenk,H.P. ( 2014 ) Streptomyces zagrosensis sp. nov., isolated from soil International journal of systematic and evolutionary microbiology

http://www.ncbi.nlm.nih.gov/pubmed/25030519
2014 Montero-Calasanz,M.C., Hofner,B., Göker,M., Rohde,M., Spröer,C., Hezbri,K., Gtari,M., Schumann,P., Klenk,H.P. ( 2014 ) Geodermatophilus poikilotrophi sp. nov.: A Multitolerant Actinomycete Isolated from Dolomitic Marble BioMed research international 2014 :914767.

http://www.ncbi.nlm.nih.gov/pubmed/25114928
2014 Montero-Calasanz,M.C., Göker,M., Rohde,M., Spröer,C., Schumann,P., Busse,H.J., Schmid,M., Klenk,H.P., Tindall,B.J., Camacho,M. ( 2014 ) Chryseobacterium oleae sp. nov., an efficient plant growth promoting bacterium in the rooting induction of olive tree (Olea europaea L.) cuttings and emended descriptions of the genus Chryseobacterium, C. daecheongense, C. gambrini, C. gleum, C. joostei, C. jejuense, C. luteum, C. shigense, C. taiwanense, C. ureilyticum and C. vrystaatense Systematic and applied microbiology 37 (5) :342-350.

http://www.ncbi.nlm.nih.gov/pubmed/24867808
2014 Zhang,Y.J., Jia,M., Ma,Y.C., Lu,K.Y., Tian,F., Klenk,H.P., Zhou,Y., Tang,S.K. ( 2014 ) Aquisalimonas halophila sp. nov., a moderately halophilic bacterium isolated from a hypersaline mine International journal of systematic and evolutionary microbiology

http://www.ncbi.nlm.nih.gov/pubmed/24699066
2014 Piao,H., Froula,J., Du,C., Kim,T.W., Hawley,E.R., Bauer,S., Wang,Z., Ivanova,N., Clark,D.S., Klenk,H.P., Hess,M. ( 2014 ) Identification of novel biomass-degrading enzymes from genomic dark matter: Populating genomic sequence space with functional annotation Biotechnology and bioengineering

http://www.ncbi.nlm.nih.gov/pubmed/24728961
2014 Meklat,A., Bouras,N., Riba,A., Zitouni,A., Mathieu,F., Rohde,M., Schumann,P., Spröer,C., Klenk,H.P., Sabaou,N. ( 2014 ) Streptomonospora algeriensis sp. nov., a halophilic actinomycete isolated from soil in Algeria Antonie Van Leeuwenhoek

http://www.ncbi.nlm.nih.gov/pubmed/24858572
2014 Tatar,D., Guven,K., Spröer,C., Klenk,H.P., Sahin,N. ( 2014 ) Streptomyces iconiensis sp. nov. and Streptomyces smyrnaeus sp. nov., two halotolerant actinomycetes isolated from Tuz (Salt) Lake and Camalti Saltern in Turkey International journal of systematic and evolutionary microbiology

http://www.ncbi.nlm.nih.gov/pubmed/24944339
2014 Sood,S., Awal,R.P., Wink,J., Mohr,K.I., Rohde,M., Stadler,M., Kämpfer,P., Glaeser,S., Schumann,P., Garcia,R., Müller,R. ( 2014 ) Aggregicoccus edonensis gen. nov., sp. nov., an unusually aggregating myxobacterium isolated from a soil sample International journal of systematic and evolutionary microbiology

http://www.ncbi.nlm.nih.gov/pubmed/24591423
2014 Montero-Calasanz,M.C., Göker,M., Rohde,M., Spröer,C., Schumann,P., Mayilraj,S., Goodfellow,M., Klenk,H.P. ( 2014 ) Description of Geodermatophilus amargosae sp. nov., to accommodate the not validly named Geodermatophilus obscurus subsp. amargosae (Luedemann, 1968) Current microbiology 68 (3) :365-371.

http://www.ncbi.nlm.nih.gov/pubmed/24202736
2014 Montero-Calasanz,M.D., Göker,M., Rohde,M., Spröer,C., Schumann,P., Mayilraj,S., Goodfellow,M., Klenk,H.P. ( 2014 ) Erratum to: Description of Geodermatophilus amargosae sp. nov., to accommodate the not validly named Geodermatophilus obscurus subsp. amargosae (Luedemann, 1968) Current microbiology

http://www.ncbi.nlm.nih.gov/pubmed/24577611
2014 SinningheDamsté,J.S., Rijpstra,W.I.C., Hopmans,E.C., Foesel,B.U., Wüst,P.K., Overmann,J., Tank,M., Bryant,D.A., Dunfield,P.F., Houghton,K., Stott,M.B. ( 2014 ) Ether- and Ester-Bound iso-Diabolic Acid and Other Lipids in Members of Acidobacteria Subdivision 4 Applied and Environmental Microbiology 80 (17) :5207-5218.

http://aem.asm.org/content/80/17/5207.abstract
2014 Söhngen,C., Bunk,B., Podstawka,A., Gleim,D., Overmann,J. ( 2014 ) BacDive - the Bacterial Diversity Metadatabase Nucleic Acids Res 42 (Database issue) :D592-9.

2014 Krebes,J., Morgan,R.D., Bunk,B., Spröer,C., Luong,K., Parusel,R., Anton,B.P., Konig,C., Josenhans,C., Overmann,J., Roberts,R.J., Korlach,J., Suerbaum,S. ( 2014 ) The complex methylome of the human gastric pathogen Helicobacter pylori Nucleic Acids Res 42 (4) :2415-32.

2014 Eckweiler,D., Bunk,B., Spröer,C., Overmann,J., Haussler,S. ( 2014 ) Complete Genome Sequence of Highly Adherent Pseudomonas aeruginosa Small-Colony Variant SCV20265 Genome Announc 2 (1)

2014 Lentini,V., Gugliandolo,C., Bunk,B., Overmann,J., Maugeri,T.L. ( 2014 ) Diversity of prokaryotic community at a shallow marine hydrothermal site elucidated by Illumina sequencing technology Curr Microbiol 69 (4) :457-66.

2014 Hamilton,T.L., Bovee,R.J., Thiel,V., Sattin,S.R., Mohr,W., Schaperdoth,I., Vogl,K., Gilhooly,W.P.,3rd, Lyons,T.W., Tomsho,L.P., Schuster,S.C., Overmann,J., Bryant,D.A., Pearson,A., Macalady,J.L. ( 2014 ) Coupled reductive and oxidative sulfur cycling in the phototrophic plate of a meromictic lake Geobiology 12 (5) :451-68.

2014 Kolinko,I., Lohsse,A., Borg,S., Raschdorf,O., Jogler,C., Tu,Q., Pósfai,M., Tompa,E., Plitzko,J.M., Brachmann,A., Wanner,G., Müller,R., Zhang,Y., Schüler,D. ( 2014 ) Biosynthesis of magnetic nanostructures in a foreign organism by transfer of bacterial magnetosome gene clusters Nature nanotechnology 9 (3) :193-197.

http://www.ncbi.nlm.nih.gov/pubmed/24561353
2014 Kollenberg,M., Winter,S., Götz,M. ( 2014 ) Quantification and localization of Watermelon chlorotic stunt virus and Tomato yellow leaf curl virus (Geminiviridae) in populations of Bemisia tabaci (Hemiptera, Aleyrodidae) with differential virus transmission characteristics. PLOSone

2014 Bananej,K., Kianfar,N., Winter,S., Menzel,W. ( 2014 ) The status of Cucumber vein yellowing virus in Iran Phytopathologia Mediterranea 53 (2) :269-276.

2014 Abraham,A.D., Menzel,W., Bekele,B., Winter,S. ( 2014 ) A novel combination of a new umbravirus, a new satellite RNA and potato leafroll virus causes tobacco bushy top disease in Ethiopia Arch Virol 159 :3395-3399.

http://www.ncbi.nlm.nih.gov/pubmed/25119677
2014 Legg,J., Somado,E.A., Barker,I., Beach,L., Ceballos,H., Cuellar,W., Elkhoury,W., Gerling,D., Helsen,J., Hershey,C., Jarvis,A., Kulakow,P., Kumar,L., Lorenzen,J., Lynam,J., McMahon,M., Maruthi,G., Miano,D., Mtunda,K., Natwuruhunga,P., Okogbenin,E., Pezo,P., Terry,E., ThieleG., Thresh,M., Wadsworth,J., Walsh,S., Winter,S., Tohme,J., Fauquet,C. ( 2014 ) A global alliance declaring war on cassava viruses in Africa Food Security 6 :231-248.

2014 Boonham,N., Kreuze,J., Winter,S., vanderVlugt,R., Bergervoet,J., Tomlinson,J., Mumford,R. ( 2014 ) Methods in virus diagnostics: From ELISA to next generation sequencing Virus Res

http://www.ncbi.nlm.nih.gov/pubmed/24361981
2014 Gilioli,G., Pasquali,S., Parisi,S., Winter,S. ( 2014 ) Modelling the potential distribution of Bemisia tabaci in Europe in light of the climatic change scenario Pest Manag Sci

2014 Menzel,W., Thottappilly,G., Winter,S. ( 2014 ) Characterization of an isometric virus isolated from yam (Dioscorea rotundata) in Nigeria suggests that it belongs to a new species in the genus Aureusvirus Arch Virol 159 (3) :603-6.

http://www.ncbi.nlm.nih.gov/pubmed/24085328
2014 Bananej,K., Kianfar,N., Vahdat,A., Winter,S., Menzel,W. ( 2014 ) Molecular and Serological Identification of Cucumber leaf spot virus in Iran Journal of Phytopathology 162 :205-208.

http://dx.doi.org/10.1111/jph.12178
2014 Eckweiler,D., Bunk,B., Spröer,C., Overmann,J., Häussler,S. ( 2014 ) Complete Genome Sequence of Highly Adherent Pseudomonas aeruginosa Small-Colony Variant SCV20265 Genome announcements 2 (1)

http://www.ncbi.nlm.nih.gov/pubmed/24459283
2014 Tielen,P., Wibberg,D., Blom,J., Rosin,N., Meyer,A.K., Bunk,B., Schobert,M., Tüpker,R., Schatschneider,S., Rückert,C., Albersmeier,A., Goesmann,A., Vorhölter,F.J., Jahn,D., Pühler,A. ( 2014 ) Genome Sequence of the Small-Colony Variant Pseudomonas aeruginosa MH27, Isolated from a Chronic Urethral Catheter Infection Genome announcements 2 (1)

http://www.ncbi.nlm.nih.gov/pubmed/24459261
2014 Söhngen,C., Bunk,B., Podstawka,A., Gleim,D., Overmann,J. ( 2014 ) BacDive--the Bacterial Diversity Metadatabase Nucleic acids research 42 (1) :D592-D599.

http://www.ncbi.nlm.nih.gov/pubmed/24214959
2014 Zarparvar,P., Amoozegar,M.A., Moshtaghi,N.M., Schumann,P., Ventosa,A. ( 2014 ) Salinithrix halophila gen. nov, sp. nov., a halophilic bacterium in the family Thermoactinomycetaceae International journal of systematic and evolutionary microbiology

http://www.ncbi.nlm.nih.gov/pubmed/25249565
2013 Chen,S., Nagel,S., Kaufmann,M., Drexler,H.G., MacLeod,R.A.F. ( 2013 ) STAG2 (Stromal Antigen 2) Atlas of Genetics and Cytogenetics in Oncology and Haematology (December 2013)

2013 Ding,J., Romani,J., Zaborski,M., Macleod,R.A., Nagel,S., Drexler,H.G., Quentmeier,H. ( 2013 ) Inhibition of PI3K/mTOR Overcomes Nilotinib Resistance in BCR-ABL1 Positive Leukemia Cells through Translational Down-Regulation of MDM2 PLoS One 8 (12) :e83510.

http://www.ncbi.nlm.nih.gov/pubmed/24349524
2013 Rosolowski,M., Lauter,J., Abramov,D., Drexler,H.G., Hummel,M., Klapper,W., Macleod,R.A., Pellissery,S., Horn,F., Siebert,R., Loeffler,M. ( 2013 ) Massive transcriptional perturbation in subgroups of diffuse large B-cell lymphomas PLoS One 8 (11) :e76287.

http://www.ncbi.nlm.nih.gov/pubmed/24223701
2013 Capes-Davis,A., Alston-Roberts,C., Kerrigan,L., Reid,Y.A., Barrett,T., Burnett,E.C., Cooper,J.R., Dirks,W.G., Macleod,R.A., Drexler,H.G., Freshney,R.I., Healy,L., Kohara,A., Korch,C., Masters,J.R., Nakamura,Y., Nims,R.W., Storts,D.R. ( 2013 ) Beware imposters: MA-1, a novel MALT lymphoma cell line, is misidentified and corresponds to Pfeiffer, a diffuse large B-cell lymphoma cell line Genes Chromosomes Cancer 52 (10) :986-8.

http://www.ncbi.nlm.nih.gov/pubmed/23907998
2013 Roesner,L.M., Mielke,C., Fahnrich,S., Merkhoffer,Y., Dittmar,K.E., Drexler,H.G., Dirks,W.G. ( 2013 ) Stable expression of MutLgamma in human cells reveals no specific response to mismatched DNA, but distinct recruitment to damage sites J Cell Biochem 114 (10) :2405-14.

http://www.ncbi.nlm.nih.gov/pubmed/23696135
2013 Kreck,B., Richter,J., Ammerpohl,O., Barann,M., Esser,D., Petersen,B.S., Vater,I., MurgaPenas,E.M., BormannChung,C.A., Seisenberger,S., LeeBoyd,V., Smallwood,S., Drexler,H.G., Macleod,R.A., Hummel,M., Krueger,F., Hasler,R., Schreiber,S., Rosenstiel,P., Franke,A., Siebert,R. ( 2013 ) Base-pair resolution DNA methylome of the EBV-positive Endemic Burkitt lymphoma cell line DAUDI determined by SOLiD bisulfite-sequencing Leukemia 27 (8) :1751-3.

http://www.ncbi.nlm.nih.gov/pubmed/23307032
2013 Nagel,S., Meyer,C., Quentmeier,H., Kaufmann,M., Drexler,H.G., Macleod,R.A. ( 2013 ) Chromothripsis in Hodgkin lymphoma Genes Chromosomes Cancer 52 (8) :741-7.

http://www.ncbi.nlm.nih.gov/pubmed/23630094
2013 Maletzki,C., Schmidt,F., Dirks,W.G., Schmitt,M., Linnebacher,M. ( 2013 ) Frameshift-derived neoantigens constitute immunotherapeutic targets for patients with microsatellite-instable haematological malignancies: Frameshift peptides for treating MSI blood cancers Eur J Cancer

http://www.ncbi.nlm.nih.gov/pubmed/23561850
2013 Quentmeier,H., Amini,R.M., Berglund,M., Dirks,W.G., Ehrentraut,S., Geffers,R., Macleod,R.A., Nagel,S., Romani,J., Scherr,M., Zaborski,M., Drexler,H.G. ( 2013 ) U-2932: two clones in one cell line, a tool for the study of clonal evolution Leukemia 27 (5) :1155-1164.

http://www.ncbi.nlm.nih.gov/pubmed/23295736
2013 Nagel,S., Ehrentraut,S., Tomasch,J., Quentmeier,H., Meyer,C., Kaufmann,M., Drexler,H.G., Macleod,R.A. ( 2013 ) Ectopic Expression of Homeobox Gene NKX2-1 in Diffuse Large B-Cell Lymphoma Is Mediated by Aberrant Chromatin Modifications PLoS One 8 (4) :e61447.

http://www.ncbi.nlm.nih.gov/pubmed/23637834
2013 Capes-Davis,A., Reid,Y.A., Kline,M.C., Storts,D.R., Strauss,E., Dirks,W.G., Drexler,H.G., Macleod,R.A., Sykes,G., Kohara,A., Nakamura,Y., Elmore,E., Nims,R.W., Alston-Roberts,C., Barallon,R., Los,G.V., Nardone,R.M., Price,P.J., Steuer,A., Thomson,J., Masters,J.R., Kerrigan,L. ( 2013 ) Match criteria for human cell line authentication: Where do we draw the line? Int J Cancer 132 (11) :2510-2519.

http://www.ncbi.nlm.nih.gov/pubmed/23136038
2013 Holmfeldt,L., Wei,L., Diaz-Flores,E., Walsh,M., Zhang,J., Ding,L., Payne-Turner,D., Churchman,M., Andersson,A., Chen,S.C., McCastlain,K., Becksfort,J., Ma,J., Wu,G., Patel,S.N., Heatley,S.L., Phillips,L.A., Song,G., Easton,J., Parker,M., Chen,X., Rusch,M., Boggs,K., Vadodaria,B., Hedlund,E., Drenberg,C., Baker,S., Pei,D., Cheng,C., Huether,R., Lu,C., Fulton,R.S., Fulton,L.L., Tabib,Y., Dooling,D.J., Ochoa,K., Minden,M., Lewis,I.D., To,L.B., Marlton,P., Roberts,A.W., Raca,G., Stock,W., Neale,G., Drexler,H.G., Dickins,R.A., Ellison,D.W., Shurtleff,S.A., Pui,C.H., Ribeiro,R.C., Devidas,M., Carroll,A.J., Heerema,N.A., Wood,B., Borowitz,M.J., Gastier-Foster,J.M., Raimondi,S.C., Mardis,E.R., Wilson,R.K., Downing,J.R., Hunger,S.P., Loh,M.L., Mullighan,C.G. ( 2013 ) The genomic landscape of hypodiploid acute lymphoblastic leukemia Nat Genet 45 (3) :242-252.

http://www.ncbi.nlm.nih.gov/pubmed/23334668
2013 Sturzl,M., Gaus,D., Dirks,W.G., Ganem,D., Jochmann,R. ( 2013 ) Kaposi's sarcoma-derived cell line SLK is not of endothelial origin, but is a contaminant from a known renal carcinoma cell line Int J Cancer 132 (8) :1954-1958.

http://www.ncbi.nlm.nih.gov/pubmed/22987579
2013 Ehrentraut,S., Nagel,S., Scherr,M.E., Schneider,B., Quentmeier,H., Geffers,R., Kaufmann,M., Meyer,C., Prochorec-Sobieszek,M., Ketterling,R.P., Knudson,R.A., Feldman,A.L., Kadin,M.E., Drexler,H.G., MacLeod,R.A.F. ( 2013 ) t(8;9)(p22;p24)/PCM1-JAK2 Activates SOCS2 and SOCS3 via STAT5 PLoS One 8 (1) :e53767.

http://www.ncbi.nlm.nih.gov/pubmed/23372669
2013 MacLeod,R.A.F., Nagel,S., Dirks,W., Drexler,H.G. ( 2013 ) BCR-ABL1 expression in multiple myeloma cells: A case of mistaken identity? Proc Natl Acad Sci U S A 110 (4) :E270-E271.

http://www.ncbi.nlm.nih.gov/pubmed/23319659
2013 Drexler,H.G., Chen,S., MacLeod,R.A. ( 2013 ) Would the real Waldenstrom cell line please stand up? Leuk Lymphoma 54 (2) :224-226.

http://www.ncbi.nlm.nih.gov/pubmed/22950966
2013 MacLeod,R.A.F., Dirks,W.G., Drexler,H.G. ( 2013 ) Where have all the cell lines gone? Int J Cancer 132 (5) :1232-1234.

http://www.ncbi.nlm.nih.gov/pubmed/22847338
2013 MacLeod,R.A.F., Drexler,H.G. ( 2013 ) Classical and molecular cytogenetic analysis Methods Mol Biol 946 :39-60.

http://www.ncbi.nlm.nih.gov/pubmed/23179825
2013 Dirks,W.G., Drexler,H.G. ( 2013 ) STR DNA Typing of Human Cell Lines: Detection of Intra- and Interspecies Cross-Contamination Methods Mol Biol 946 :27-38.

http://www.ncbi.nlm.nih.gov/pubmed/23179824
2013 Uphoff,C.C., Drexler,H.G. ( 2013 ) Eradication of Mycoplasma contaminations Methods Mol Biol 946 :15-26.

http://www.ncbi.nlm.nih.gov/pubmed/23179823
2013 Uphoff,C.C., Drexler,H.G. ( 2013 ) Detection of Mycoplasma contaminations Methods Mol Biol 946 :1-13.

http://www.ncbi.nlm.nih.gov/pubmed/23179822
2013 Castro,F., Dirks,W.G., Fahnrich,S., Hotz-Wagenblatt,A., Pawlita,M., Schmitt,M. ( 2013 ) High-throughput SNP-based authentication of human cell lines Int J Cancer 132 (2) :308-314.

http://www.ncbi.nlm.nih.gov/pubmed/22700458
2013 Brack,C., Mikolasch,A., Pukall,R., Schumann,P., Köster,M., Schauer,F. ( 2013 ) Bacteriolytic Bacillus species isolated from brackish waters of the Southern Baltic Sea Mar Biol

2013 Rohde,C., Smith,D., Martin,D., Fritze,D., Stalpers,J. ( 2013 ) Code of Conduct on Biosecurity for Biological Resource Centres (BRCs) - Procedural implementation Int J Syst Evol Microbiol

http://www.ncbi.nlm.nih.gov/pubmed/23667143
2013 Meklat,A., Bouras,N., Zitouni,A., Mathieu,F., Lebrihi,A., Schumann,P., Sproer,C., Klenk,H.P., Sabaou,N. ( 2013 ) Actinopolyspora mzabensis sp. nov., a novel halophilic actinomycete isolated from a Saharan soil of Algeria Int J Syst Evol Microbiol

http://www.ncbi.nlm.nih.gov/pubmed/23667146
2013 Spring,S., Riedel,T., Spröer,C., Yan,S., Harder,J., Fuchs,B.M. ( 2013 ) Taxonomy and evolution of bacteriochlorophyll a-containing members of the OM60/NOR5 clade of marine gammaproteobacteria: description of Luminiphilus syltensis gen. nov., sp. nov., reclassification of Haliea rubra as Pseudohaliea rubra gen. nov., comb. nov., and emendation of Chromatocurvus halotolerans BMC Microbiol 13 :118.

http://www.ncbi.nlm.nih.gov/pubmed/23705883
2013 Spring,S., Riedel,T. ( 2013 ) Mixotrophic growth of bacteriochlorophyll a-containing members of the OM60/NOR5 clade of marine gammaproteobacteria is carbon-starvation independent and correlates with the type of carbon source and oxygen availability BMC Microbiol 13 :117.

http://www.ncbi.nlm.nih.gov/pubmed/23705861
2013 Montero-Calasanz,M.D., Göker,M., Pötter,G., Rohde,M., Spröer,C., Schumann,P., Gorbushina,A.A., Klenk,H.P. ( 2013 ) Geodermatophilus africanus sp. nov., a halotolerant actinomycete isolated from Saharan desert sand Antonie Van Leeuwenhoek

http://www.ncbi.nlm.nih.gov/pubmed/23723018
2013 Meier-Kolthoff,J.P., Göker,M., Spröer,C., Klenk,H.P. ( 2013 ) When should a DDH experiment be mandatory in microbial taxonomy? Arch Microbiol 195 (6) :413-8.

http://www.ncbi.nlm.nih.gov/pubmed/23591456
2013 Meklat,A., Bouras,N., Zitouni,A., Mathieu,F., Lebrihi,A., Schumann,P., Spröer,C., Klenk,H.P., Sabaou,N. ( 2013 ) Actinopolyspora righensis sp. nov., a novel halophilic actinomycete isolated from Saharan soil in Algeria Antonie Van Leeuwenhoek

http://www.ncbi.nlm.nih.gov/pubmed/23754661
2013 Li,H.W., Zhi,X.Y., Yao,J.C., Zhou,Y., Tang,S.K., Klenk,H.P., Zhao,J., Li,W.J. ( 2013 ) Comparative genomic analysis of the genus Nocardiopsis provides new insights into its genetic mechanisms of environmental adaptability PLoS One 8 (4) :e61528.

http://www.ncbi.nlm.nih.gov/pubmed/23626695
2013 Hernandez-Sanchez,V., Lang,E., Wittich,R.M. ( 2013 ) The Three-Species Consortium of Genetically Improved Strains Cupriavidus necator RW112, Burkholderia xenovorans RW118, and Pseudomonas pseudoalcaligenes RW120 Grows with Technical Polychlorobiphenyl, Aroclor 1242 Front Microbiol 4 :90.

http://www.ncbi.nlm.nih.gov/pubmed/23658554
2013 Cheng,J., Chen,W., Huo-Zhang,B., Nimaichand,S., Zhou,E.M., Lu,X.H., Klenk,H.P., Li,W.J. ( 2013 ) Microlunatus cavernae sp. nov., a novel actinobacterium isolated from Alu ancient cave, Yunnan, south-west China Antonie Van Leeuwenhoek 104 (1) :95-101.

http://www.ncbi.nlm.nih.gov/pubmed/23653120
2013 Smith,S., Fritze,D., Stackebrandt,E. ( 2013 ) Public Service Collections and Biological Resource Centers of Microorganisms The Prokaryotes :267-304.

2013 Göker,M., Klenk,H.-P. ( 2013 ) Phylogeny-driven target selection for genome-sequencing (and other) projects Stand Genomic Sci 8 :360-374.

2013 Stackebrandt,E., Chertkov,O., Lapidus,A., Nolan,M., Lucas,S., Hammon,N., Deshpande,S., Cheng,J.-F., Tapia,R., Goodwin,L.A., Pitluck,S., Liolios,K., Pagani,I., Ivanova,N., Mavromatis,K., Mikhailova,N., Huntemann,M., Pati,A., Chen,A., Palaniappan,K., Land,M., Pan,C., Rohde,M., Gronow,S., Göker,M., Detter,J.C., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Woyke,T., Kyrpides,N.C., Klenk,H.-P. ( 2013 ) Complete genome sequence of the free-living aerobic spirochete Turneriella parva type strain (HT) Stand Genomic Sci 8 :228-238.

2013 Huntemann,M., Stackebrandt,E., Held,B., Nolan,M., Lucas,S., Hammon,N., Deshpande,S., Cheng,J.F., Tapia,R., Goodwin,L.A., Pitluck,S., Liolios,K., Pagani,I., Ivanova,N., Mavromatis,K., Mikhailova,N., Pati,A., Chen,A., Palaniappan,K., Land,M., Rohde,M., Gronow,S., Göker,M., Detter,J.C., Bristow,J., Eisen,J.A., Markowitz,V., Woyke,T., Hugenholtz,P., Kyrpides,N.C., Klenk,H.-P., Lapidus,A. ( 2013 ) Genome sequence of the phylogenetically isolated spirochete Leptonema illini type strain (3055T) Stand Genomic Sci 8 :177-187.

2013 Liolios,K., Abt,B., Scheuner,C., Teshima,H., Held,B., Lapidus,A., Nolan,M., Lucas,S., Deshpande,S., Cheng,J.F., Tapia,R., Goodwin,L.A., Pitluck,S., Pagani,I., Ivanova,N., Mavromatis,K., Mikhailova,N., Huntemann,M., Pati,A., Chen,A., Palaniappan,K., Land,M., Rohde,M., Tindall,B.J., Detter,J.C., Göker,M., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Woyke,T., Klenk,H.-P., Kyrpides,N.C. ( 2013 ) Complete genome sequence of the halophilic bacterium Spirochaeta africana type strain (Z-7692T) from the alkaline Lake Magadi in the East African Rift. Stand Genomic Sci 7 :165-176.

2013 Abt,B., Göker,M., Scheuner,C., Han,C., Lu,M., Misra,M., Lapidus,A., Nolan,M., Lucas,S., Hammon,N., Deshpande,S., Chang,J.F., Tapia,R., Goodwin,L.A., Pitluck,S., Liolios,K., Pagani,I., Ivanova,N., Mavromatis,K., Mikhailova,N., Huntemann,M., Pati,A., Chen,A., Palaniappan,K., Land,M., Hauser,L., Jeffries,C.D., Rohde,M., Spring,S., Gronow,S., Detter,J.C., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Kyrpides,N.C., Woyke,T., Klenk,H.-P. ( 2013 ) Genome sequence of the thermophilic fresh-water bacterium Spirochaeta caldaria type strain (H1T), reclassification of Spirochaeta caldaria, Spirochaeta stenostrepta, and Spirochaeta zuelzerae in the genus Treponema as Treponema caldaria comb. nov., Treponema stenostrepta comb. nov., and Treponema zuelzerae comb. nov., and emendation of the genus Treponema. Stand Genomic Sci 8 :88-105.

2013 Visser,M., Worm,P., Muyzer,G., Pereira,I.A.C., Schaap,P.J., Plugge,C.M., Kuever,J., Parshina,S.N., Nazina,T.N., Ivanova,A.E., Bernier-Latmani,R., Goodwin,L.A., Kyrpides,N.C., Woyke,T., Chain,P., Davenport,K.W., Spring,S., Klenk,H.-P., Stams,A. ( 2013 ) Genome analysis of Desulfotomaculum kuznetsovii strain 17T reveals a physiological similarity with Pelotomaculum thermopropionicum SIT Stand Genomic Sci 8 :69-87.

2013 Mavromatis,K., Stackebrandt,E., Held,B., Lapidus,A., Nolan,M., Lucas,S., Hammon,N., Deshpande,S., Cheng,J.-F., Tapia,R., Goodwin,L.A., Pitluck,S., Liolios,K., Pagani,I., Ivanova,N., Mikhailova,N., Huntemann,M., Pati,A., Chen,A., Palaniappan,K., Land,M., Rohde,M., Spring,S., Göker,M., Woyke,T., Detter,J.C., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Klenk,H.-P., Kyrpides,N. ( 2013 ) Complete genome sequence of the moderate thermophile Anaerobaculum mobile type strain (NGAT). Stand Genomic Sci 8 :47-57.

2013 Stackebrandt,E., Chertkov,O., Lapidus,A., Nolan,M., Lucas,S., Han,C., Cheng,J.F., Tapia,R., Goodwin,L.A., Bruce,D., Pitluck,S., Liolios,K., Mavromatis,K., Pagani,I., Ivanova,N., Mikhailova,N., Huntemann,M., Pati,A., Chen,A., Palaniappan,K., Rohde,M., Tindall,B.J., Göker,M., Woyke,T., Detter,J.C., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Klenk,H.-P., Kyrpides,N. ( 2013 ) High-quality-draft genome sequence of the yellow-pigmented flavobacterium Joostella marina type strain (En5T) Stand Genomic Sci 8 :37-46.

2013 Vaas,L.A., Sikorski,J., Hofner,B., Fiebig,A., Buddruhs,N., Klenk,H.P., Göker,M. ( 2013 ) opm: an R package for analysing OmniLog(R) phenotype microarray data Bioinformatics

http://www.ncbi.nlm.nih.gov/pubmed/23740744
2013 Mavromatis,K., Stackebrandt,E., Munk,C., Lapidus,A., Nolan,M., Lucas,S., Hammon,N., Deshpande,S., Cheng,J.-F., Tapia,R., Goodwin,L.A., Pitluck,S., Liolios,K., Pagani,I., Ivanova,N., Mikhailova,N., Huntemann,M., Pati,A., Chen,A., Palaniappan,K., Land,M., Hauser,L., Rohde,M., Gronow,S., Göker,M., Detter,J.C., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Kyrpides,N.C., Klenk,H.-P., Woyke,T. ( 2013 ) Complete genome sequence of the bile-resistant pigment-producing anaerobe Alistipes finegoldii type strain (AHN2437T) Stand Genomic Sci 8 :26-36.

2013 Foesel,B.U., Nagele,V., Naether,A., Wust,P.K., Weinert,J., Bonkowski,M., Lohaus,G., Polle,A., Alt,F., Oelmann,Y., Fischer,M., Friedrich,M.W., Overmann,J. ( 2013 ) Determinants of Acidobacteria activity inferred from the relative abundances of 16S rRNA transcripts in German grassland and forest soils Environ Microbiol

http://www.ncbi.nlm.nih.gov/pubmed/23802854
2013 Stackebrandt,E., Zeytun,A., Lapidus,A., Nolan,M., Lucas,S., Hammon,N., Deshpande,S., Cheng,J.-F., Tapia,R., Goodwin,L.A., Pitluck,S., Liolios,K., Pagani,I., Ivanova,N., Mavromatis,K., Mikhailova,N., Huntemann,M., Pati,A., Chen,A., Palaniappan,K., Chang,Y.-J., Land,M., Hauser,L., Rohde,M., Pukall,R., Göker,M., Detter,J.C., Woyke,T., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Kyrpides,N.C., Klenk,H.-P. ( 2013 ) Complete genome sequence of Coriobacterium glomerans type strain (PW2T) from the midgut of Pyrrhocoris apterus L. (red soldier bug) Stand Genomic Sci 8 :15-25.

2013 Freese,H.M., Martin-Creuzburg,D. ( 2013 ) Food quality of mixed bacteria-algae diets for Daphnia magna Hydrobiologia

2013 Liolios,K., Abt,B., Scheuner,C., Teshima,H., Held,B., Lapidus,A., Nolan,M., Lucas,S., Deshpande,S., Cheng,J.F., Tapia,R., Goodwin,L.A., Pitluck,S., Pagani,I., Ivanova,N., Mavromatis,K., Mikhailova,N., Huntemann,M., Pati,A., Chen,A., Palaniappan,K., Land,M., Rohde,M., Tindall,B.J., Detter,J.C., Göker,M., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Woyke,T., Klenk,H.-P., Kyrpides,N.C. ( 2013 ) Complete genome sequence of the halophilic bacterium Spirochaeta africana type strain (Z-7692T) from the alkaline Lake Magadi in the East African Rift. Stand Genomic Sci 7 :165-176.

2013 Abt,B., Göker,M., Scheuner,C., Han,C., Lu,M., Misra,M., Lapidus,A., Nolan,M., Lucas,S., Hammon,N., Deshpande,S., Chang,J.F., Tapia,R., Goodwin,L.A., Pitluck,S., Liolios,K., Pagani,I., Ivanova,N., Mavromatis,K., Mikhailova,N., Huntemann,M., Pati,A., Chen,A., Palaniappan,K., Land,M., Hauser,L., Jeffries,C.D., Rohde,M., Spring,S., Gronow,S., Detter,J.C., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Kyrpides,N.C., Woyke,T., Klenk,H.-P. ( 2013 ) Genome sequence of the thermophilic fresh-water bacterium Spirochaeta caldaria type strain (H1T), reclassification of Spirochaeta caldaria, Spirochaeta stenostrepta, and Spirochaeta zuelzerae in the genus Treponema as Treponema caldaria comb. nov., Treponema stenostrepta comb. nov., and Treponema zuelzerae comb. nov., and emendation of the genus Treponema. Stand Genomic Sci 8 :88-105.

2013 Foesel,B.U., Rohde,M., Overmann,J. ( 2013 ) Blastocatella fastidiosa gen. nov., sp. nov., isolated from semiarid savanna soil - the first described species of Acidobacteria subdivision 4 Syst Appl Microbiol 36 (2) :82-89.

http://www.ncbi.nlm.nih.gov/pubmed/23266188
2013 Freese,H.M., Martin-Creuzburg,D. ( 2013 ) Food quality of mixed bacteria-algae diets for Daphnia magna Hydrobiologia

2013 Losey,N.A., Stevenson,B.S., Verbarg,S., Rudd,S., Moore,E.R., Lawson,P.A. ( 2013 ) Fontimonas thermophila gen. nov., sp. nov., a moderately thermophilic bacterium isolated from a freshwater hot spring, and proposal of Solimonadaceae fam. nov. to replace Sinobacteraceae Zhou et al. 2008 Int J Syst Evol Microbiol 63 (Pt 1) :254-9.

http://www.ncbi.nlm.nih.gov/pubmed/22407788
2013 Lal,D., Khan,F., Gupta,S.K., Schumann,P., Lal,R. ( 2013 ) Edaphobacillus lindanitolerans gen. nov., sp. nov., isolated from hexachlorocyclohexane (HCH) contaminated soil. J Basic Microbiol :1-8.

http://www.ncbi.nlm.nih.gov/pubmed/23322487
2013 Bandyopadhyay,S., Schumann,P., Das,S.K. ( 2013 ) Pannonibacter indica sp. nov., a highly arsenate-tolerant bacterium isolated from a hot spring in India. Arch Microbiol 195 (1) :1-8.

http://www.ncbi.nlm.nih.gov/pubmed/22940883
2013 Fiebig,A., Pradella,S., Petersen,J., Michael,V., Päuker,O., Rohde,M., Göker,M., Klenk,H.-P., Wagner-Döbler,I. ( 2013 ) Genome of the marine alphaproteobacterium Hoeflea phototrophica type strain (DFL-43T) Stand Genomic Sci 7 :440-448.

2013 Fiebig,A., Pradella,S., Petersen,J., Päuker,O., Michael,V., Lünsdorf,H., Göker,M., Klenk,H.-P., Wagner-Döbler,I. ( 2013 ) Genome of the R-body producing marine alphaproteobacterium Labrenzia alexandrii type strain (DFL-11T) Stand Genomic Sci 7 :413-426.

2013 Zhu,W.Y., Zhang,J.L., Qin,Y.L., Xiong,Z.J., Zhang,D.F., Klenk,H.P., Zhao,L.X., Xu,L.H., Li,W.J. ( 2013 ) Blastococcus endophyticus sp. nov., a novel actinobacterium isolated from Camptotheca acuminata Decne Int J Syst Evol Microbiol

http://www.ncbi.nlm.nih.gov/pubmed/23475341
2013 Tortoli,E., Gitti,Z., Klenk,H.P., Lauria,S., Mannino,R., Mantegani,P., Mariottini,A., Neonakis,I. ( 2013 ) Survey of 150 strains belonging to the Mycobacterium terrae complex and description of Mycobacterium engbaekii sp. nov., Mycobacterium heraklionense sp. nov. and Mycobacterium longobardum sp. nov Int J Syst Evol Microbiol 63 (Pt 2) :401-11.

http://www.ncbi.nlm.nih.gov/pubmed/22447702