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Publications of the DSMZ

Here you will find a complete list of all scientific publications.

Publications
2013 Bagheri,M., Amoozegar,M.A., Didari,M., Makhdoumi-Kakhki,A., Schumann,P., Spröer,C., Sanchez-Porro,C., Ventosa,A. ( 2013 ) Marinobacter persicus sp. nov., a moderately halophilic bacterium from a saline lake in Iran Antonie Van Leeuwenhoek 104 (1) :47-54.

http://www.ncbi.nlm.nih.gov/pubmed/23592177
2013 Ziegler,S., Waidner,B., Itoh,T., Schumann,P., Spring,S., Gescher,J. ( 2013 ) Metallibacterium scheffleri gen. nov., sp. nov., an alkalinizing gammaproteobacterium isolated from an acidic biofilm Int J Syst Evol Microbiol 63 (Pt 4) :1499-504.

http://www.ncbi.nlm.nih.gov/pubmed/22863988
2013 Sedlacek,I., Holochova,P., Maslanova,I., Kosina,M., Sproer,C., Bryndova,H., Vandamme,P., Rudolf,I., Hubalek,Z., Svec,P. ( 2013 ) Enterococcus ureilyticus sp. nov. and Enterococcus rotai sp. nov., two urease-producing enterococci from the environment Int J Syst Evol Microbiol 63 (Pt 2) :502-10.

http://www.ncbi.nlm.nih.gov/pubmed/22523160
2013 Penesyan,A., Breider,S., Schumann,P., Tindall,B.J., Egan,S., Brinkhoff,T. ( 2013 ) Epibacterium ulvae gen. nov., sp. nov., epibiotic bacteria isolated from the surface of a marine alga Int J Syst Evol Microbiol 63 (Pt 5) :1589-96.

http://www.ncbi.nlm.nih.gov/pubmed/22904216
2013 Mehrshad,M., Amoozegar,M.A., Didari,M., Bagheri,M., ShahzadehFazeli,S.A., Schumann,P., Sproer,C., Sanchez-Porro,C., Ventosa,A. ( 2013 ) Bacillus halosaccharovorans sp. nov., a moderately halophilic bacterium from a hypersaline Iranian lake Int J Syst Evol Microbiol

http://www.ncbi.nlm.nih.gov/pubmed/23291894
2013 Lang,E., Schumann,P., Knapp,B.A., Kumar,R., Sproer,C., Insam,H. ( 2013 ) Budvicia diplopodorum sp. nov. and emended description of the genus Budvicia Int J Syst Evol Microbiol 63 (Pt 1) :260-267.

http://www.ncbi.nlm.nih.gov/pubmed/22407790
2013 Kim,S.J., Jang,Y.H., Ahn,J.H., Weon,H.Y., Schumann,P., Chun,S.C., Kwon,S.W., Kim,W.G. ( 2013 ) Rudaeicoccus suwonensis gen. nov., sp. nov., an actinobacterium isolated from the epidermal tissue of a root of a Phalaenopsis orchid Int J Syst Evol Microbiol 63 (Pt 4) :1291-1296.

http://www.ncbi.nlm.nih.gov/pubmed/22798654
2013 Kampfer,P., Glaeser,S.P., Schafer,J., Lodders,N., Martin,K., Schumann,P. ( 2013 ) Ornithinimicrobium murale sp. nov., isolated from an indoor wall colonized by moulds Int J Syst Evol Microbiol 63 (Pt 1) :119-123.

http://www.ncbi.nlm.nih.gov/pubmed/22888195
2013 Hamada,M., Tamura,T., Shibata,C., Yamamura,H., Hayakawa,M., Schumann,P., Suzuki,K.I. ( 2013 ) Paraoerskovia sediminicola sp. nov., an actinobacterium isolated from sea sediment, and emended description of the genus Paraoerskovia Int J Syst Evol Microbiol

http://www.ncbi.nlm.nih.gov/pubmed/23291891
2013 Hahnke,S., Tindall,B.J., Schumann,P., Simon,M., Brinkhoff,T. ( 2013 ) Pelagimonas varians gen. nov., sp. nov., isolated from the southern North Sea Int J Syst Evol Microbiol 63 (Pt 3) :835-843.

http://www.ncbi.nlm.nih.gov/pubmed/22611199
2013 Ferreira,T., vanReenen,C.A., Endo,A., Sproer,C., Malan,A.P., Dicks,L.M. ( 2013 ) Description of Xenorhabdus khoisanae sp. nov., the symbiont of the entomopathogenic nematode Steinernema khoisanae Int J Syst Evol Microbiol

http://www.ncbi.nlm.nih.gov/pubmed/23456807
2013 Didari,M., Amoozegar,M.A., Bagheri,M., Mehrshad,M., Schumann,P., Sproer,C., Sanchez-Porro,C., Ventosa,A. ( 2013 ) Bacillus persicus sp. nov., a halophilic bacterium from a hypersaline lake Int J Syst Evol Microbiol 63 (Pt 4) :1229-1234.

http://www.ncbi.nlm.nih.gov/pubmed/22771682
2013 DeBel,A., VanHoorde,K., Wybo,I., Vandoorslaer,K., Echahidi,F., DeBrandt,E., Schumann,P., Ieven,M., Soetens,O., Pierard,D., Vandamme,P. ( 2013 ) Staphylococcus jettensis sp. nov., a novel coagulase-negative staphylococcal species isolated from human clinical specimens Int J Syst Evol Microbiol

http://www.ncbi.nlm.nih.gov/pubmed/23456811
2013 Cousin,S., Motreff,L., Gulat-Okalla,M.L., Gouyette,C., Sproer,C., Schumann,P., Begaud,E., Bouchier,C., Clermont,D., Bizet,C. ( 2013 ) Lactobacillus pasteurii sp. nov. and Lactobacillus hominis sp. nov Int J Syst Evol Microbiol 63 (Pt 1) :53-59.

http://www.ncbi.nlm.nih.gov/pubmed/22328611
2013 Camas,M., Sazak,A., Sproer,C., Klenk,H.P., Cetin,D., Guven,K., Sahin,N. ( 2013 ) Nonomuraea jabiensis sp. nov., isolated from arid soil Int J Syst Evol Microbiol 63 (Pt 1) :212-218.

http://www.ncbi.nlm.nih.gov/pubmed/22389281
2013 Camas,M., Sahin,N., Sazak,A., Spröer,C., Klenk,H.P. ( 2013 ) Amycolatopsis magusensis sp. nov., isolated from soil Int J Syst Evol Microbiol 63 (Pt 4) :1254-1260.

http://www.ncbi.nlm.nih.gov/pubmed/22771685
2013 Boubetra,D., Zitouni,A., Bouras,N., Mathieu,F., Lebrihi,A., Schumann,P., Sproer,C., Klenk,H.P., Sabaou,N. ( 2013 ) Saccharothrix hoggarensis sp. nov., an actinomycete isolated from Saharan soil Int J Syst Evol Microbiol 63 (Pt 2) :549-453.

http://www.ncbi.nlm.nih.gov/pubmed/22523169
2013 Bagheri,M., Amoozegar,M.A., Schumann,P., Didari,M., Mehrshad,M., Sproer,C., Sanchez-Porro,C., Ventosa,A. ( 2013 ) Ornithinibacillus halophilus sp. nov., a moderately halophilic, Gram-stain-positive, endospore-forming bacterium from a hypersaline lake Int J Syst Evol Microbiol 63 (Pt 3) :844-848.

http://www.ncbi.nlm.nih.gov/pubmed/22611200
2013 Amoozegar,M.A., Makhdoumi-Kakhki,A., Ramezani,M., Nikou,M.M., Fazeli,S.A., Schumann,P., Ventosa,A. ( 2013 ) Limimonas halophila gen. nov., sp. nov., an extremely halophilic bacterium in the family Rhodospirillaceae Int J Syst Evol Microbiol 63 (Pt 4) :1562-1567.

http://www.ncbi.nlm.nih.gov/pubmed/22904212
2013 Amoozegar,M.A., Didari,M., Bagheri,M., ShahzadehFazeli,S.A., Schumann,P., Sproer,C., Sanchez-Porro,C., Ventosa,A. ( 2013 ) Bacillus salsus sp. nov., a novel halophilic bacterium from a hypersaline lake Int J Syst Evol Microbiol

http://www.ncbi.nlm.nih.gov/pubmed/23504967
2013 Amoozegar,M.A., Bagheri,M., Didari,M., ShahzedehFazeli,S.A., Schumann,P., Sanchez-Porro,C., Ventosa,A. ( 2013 ) Saliterribacillus persicus gen. nov., sp. nov., a moderately halophilic bacterium isolated from a hypersaline lake Int J Syst Evol Microbiol 63 (Pt 1) :345-351.

http://www.ncbi.nlm.nih.gov/pubmed/22447700
2013 Addou,A.N., Schumann,P., Spröer,C., Bouanane-Darenfed,A., Amarouche-Yala,S., Hacene,H., Cayol,J.L., Fardeau,M.L. ( 2013 ) Melghirimyces thermohalophilus sp. nov., a thermoactinomycete isolated from an Algerian salt lake Int J Syst Evol Microbiol 63 (Pt 5) :1717-1722.

http://www.ncbi.nlm.nih.gov/pubmed/23041632
2013 Chen,H., Jogler,M., Rohde,M., Klenk,H.P., Busse,H.J., Tindall,B.J., Spröer,C., Overmann,J. ( 2013 ) Sphingobium limneticum sp. nov., and Sphingobium boeckii, two novel freshwater planktonic members of the family Sphingomonadaceae, and reclassification of Sphingomonas suberifaciens as Sphingobium suberifaciens comb. nov. Int J Syst Evol Microbiol 63 :735-743.

http://www.ncbi.nlm.nih.gov/pubmed/22561591
2013 Chen,S., Nagel,S., Kaufmann,M., Drexler,H.G., MacLeod,R.A.F. ( 2013 ) STAG2 (Stromal Antigen 2) Atlas of Genetics and Cytogenetics in Oncology and Haematology (December 2013)

2013 Ding,J., Romani,J., Zaborski,M., Macleod,R.A., Nagel,S., Drexler,H.G., Quentmeier,H. ( 2013 ) Inhibition of PI3K/mTOR Overcomes Nilotinib Resistance in BCR-ABL1 Positive Leukemia Cells through Translational Down-Regulation of MDM2 PLoS One 8 (12) :e83510.

http://www.ncbi.nlm.nih.gov/pubmed/24349524
2013 Rosolowski,M., Lauter,J., Abramov,D., Drexler,H.G., Hummel,M., Klapper,W., Macleod,R.A., Pellissery,S., Horn,F., Siebert,R., Loeffler,M. ( 2013 ) Massive transcriptional perturbation in subgroups of diffuse large B-cell lymphomas PLoS One 8 (11) :e76287.

http://www.ncbi.nlm.nih.gov/pubmed/24223701
2013 Capes-Davis,A., Alston-Roberts,C., Kerrigan,L., Reid,Y.A., Barrett,T., Burnett,E.C., Cooper,J.R., Dirks,W.G., Macleod,R.A., Drexler,H.G., Freshney,R.I., Healy,L., Kohara,A., Korch,C., Masters,J.R., Nakamura,Y., Nims,R.W., Storts,D.R. ( 2013 ) Beware imposters: MA-1, a novel MALT lymphoma cell line, is misidentified and corresponds to Pfeiffer, a diffuse large B-cell lymphoma cell line Genes Chromosomes Cancer 52 (10) :986-8.

http://www.ncbi.nlm.nih.gov/pubmed/23907998
2013 Roesner,L.M., Mielke,C., Fahnrich,S., Merkhoffer,Y., Dittmar,K.E., Drexler,H.G., Dirks,W.G. ( 2013 ) Stable expression of MutLgamma in human cells reveals no specific response to mismatched DNA, but distinct recruitment to damage sites J Cell Biochem 114 (10) :2405-14.

http://www.ncbi.nlm.nih.gov/pubmed/23696135
2013 Kreck,B., Richter,J., Ammerpohl,O., Barann,M., Esser,D., Petersen,B.S., Vater,I., MurgaPenas,E.M., BormannChung,C.A., Seisenberger,S., LeeBoyd,V., Smallwood,S., Drexler,H.G., Macleod,R.A., Hummel,M., Krueger,F., Hasler,R., Schreiber,S., Rosenstiel,P., Franke,A., Siebert,R. ( 2013 ) Base-pair resolution DNA methylome of the EBV-positive Endemic Burkitt lymphoma cell line DAUDI determined by SOLiD bisulfite-sequencing Leukemia 27 (8) :1751-3.

http://www.ncbi.nlm.nih.gov/pubmed/23307032
2013 Nagel,S., Meyer,C., Quentmeier,H., Kaufmann,M., Drexler,H.G., Macleod,R.A. ( 2013 ) Chromothripsis in Hodgkin lymphoma Genes Chromosomes Cancer 52 (8) :741-7.

http://www.ncbi.nlm.nih.gov/pubmed/23630094
2013 Maletzki,C., Schmidt,F., Dirks,W.G., Schmitt,M., Linnebacher,M. ( 2013 ) Frameshift-derived neoantigens constitute immunotherapeutic targets for patients with microsatellite-instable haematological malignancies: Frameshift peptides for treating MSI blood cancers Eur J Cancer

http://www.ncbi.nlm.nih.gov/pubmed/23561850
2013 Quentmeier,H., Amini,R.M., Berglund,M., Dirks,W.G., Ehrentraut,S., Geffers,R., Macleod,R.A., Nagel,S., Romani,J., Scherr,M., Zaborski,M., Drexler,H.G. ( 2013 ) U-2932: two clones in one cell line, a tool for the study of clonal evolution Leukemia 27 (5) :1155-1164.

http://www.ncbi.nlm.nih.gov/pubmed/23295736
2013 Nagel,S., Ehrentraut,S., Tomasch,J., Quentmeier,H., Meyer,C., Kaufmann,M., Drexler,H.G., Macleod,R.A. ( 2013 ) Ectopic Expression of Homeobox Gene NKX2-1 in Diffuse Large B-Cell Lymphoma Is Mediated by Aberrant Chromatin Modifications PLoS One 8 (4) :e61447.

http://www.ncbi.nlm.nih.gov/pubmed/23637834
2013 Capes-Davis,A., Reid,Y.A., Kline,M.C., Storts,D.R., Strauss,E., Dirks,W.G., Drexler,H.G., Macleod,R.A., Sykes,G., Kohara,A., Nakamura,Y., Elmore,E., Nims,R.W., Alston-Roberts,C., Barallon,R., Los,G.V., Nardone,R.M., Price,P.J., Steuer,A., Thomson,J., Masters,J.R., Kerrigan,L. ( 2013 ) Match criteria for human cell line authentication: Where do we draw the line? Int J Cancer 132 (11) :2510-2519.

http://www.ncbi.nlm.nih.gov/pubmed/23136038
2013 Holmfeldt,L., Wei,L., Diaz-Flores,E., Walsh,M., Zhang,J., Ding,L., Payne-Turner,D., Churchman,M., Andersson,A., Chen,S.C., McCastlain,K., Becksfort,J., Ma,J., Wu,G., Patel,S.N., Heatley,S.L., Phillips,L.A., Song,G., Easton,J., Parker,M., Chen,X., Rusch,M., Boggs,K., Vadodaria,B., Hedlund,E., Drenberg,C., Baker,S., Pei,D., Cheng,C., Huether,R., Lu,C., Fulton,R.S., Fulton,L.L., Tabib,Y., Dooling,D.J., Ochoa,K., Minden,M., Lewis,I.D., To,L.B., Marlton,P., Roberts,A.W., Raca,G., Stock,W., Neale,G., Drexler,H.G., Dickins,R.A., Ellison,D.W., Shurtleff,S.A., Pui,C.H., Ribeiro,R.C., Devidas,M., Carroll,A.J., Heerema,N.A., Wood,B., Borowitz,M.J., Gastier-Foster,J.M., Raimondi,S.C., Mardis,E.R., Wilson,R.K., Downing,J.R., Hunger,S.P., Loh,M.L., Mullighan,C.G. ( 2013 ) The genomic landscape of hypodiploid acute lymphoblastic leukemia Nat Genet 45 (3) :242-252.

http://www.ncbi.nlm.nih.gov/pubmed/23334668
2013 Sturzl,M., Gaus,D., Dirks,W.G., Ganem,D., Jochmann,R. ( 2013 ) Kaposi's sarcoma-derived cell line SLK is not of endothelial origin, but is a contaminant from a known renal carcinoma cell line Int J Cancer 132 (8) :1954-1958.

http://www.ncbi.nlm.nih.gov/pubmed/22987579
2013 Ehrentraut,S., Nagel,S., Scherr,M.E., Schneider,B., Quentmeier,H., Geffers,R., Kaufmann,M., Meyer,C., Prochorec-Sobieszek,M., Ketterling,R.P., Knudson,R.A., Feldman,A.L., Kadin,M.E., Drexler,H.G., MacLeod,R.A.F. ( 2013 ) t(8;9)(p22;p24)/PCM1-JAK2 Activates SOCS2 and SOCS3 via STAT5 PLoS One 8 (1) :e53767.

http://www.ncbi.nlm.nih.gov/pubmed/23372669
2013 MacLeod,R.A.F., Nagel,S., Dirks,W., Drexler,H.G. ( 2013 ) BCR-ABL1 expression in multiple myeloma cells: A case of mistaken identity? Proc Natl Acad Sci U S A 110 (4) :E270-E271.

http://www.ncbi.nlm.nih.gov/pubmed/23319659
2013 Drexler,H.G., Chen,S., MacLeod,R.A. ( 2013 ) Would the real Waldenstrom cell line please stand up? Leuk Lymphoma 54 (2) :224-226.

http://www.ncbi.nlm.nih.gov/pubmed/22950966
2013 MacLeod,R.A.F., Dirks,W.G., Drexler,H.G. ( 2013 ) Where have all the cell lines gone? Int J Cancer 132 (5) :1232-1234.

http://www.ncbi.nlm.nih.gov/pubmed/22847338
2013 MacLeod,R.A.F., Drexler,H.G. ( 2013 ) Classical and molecular cytogenetic analysis Methods Mol Biol 946 :39-60.

http://www.ncbi.nlm.nih.gov/pubmed/23179825
2013 Dirks,W.G., Drexler,H.G. ( 2013 ) STR DNA Typing of Human Cell Lines: Detection of Intra- and Interspecies Cross-Contamination Methods Mol Biol 946 :27-38.

http://www.ncbi.nlm.nih.gov/pubmed/23179824
2013 Uphoff,C.C., Drexler,H.G. ( 2013 ) Eradication of Mycoplasma contaminations Methods Mol Biol 946 :15-26.

http://www.ncbi.nlm.nih.gov/pubmed/23179823
2013 Uphoff,C.C., Drexler,H.G. ( 2013 ) Detection of Mycoplasma contaminations Methods Mol Biol 946 :1-13.

http://www.ncbi.nlm.nih.gov/pubmed/23179822
2013 Castro,F., Dirks,W.G., Fahnrich,S., Hotz-Wagenblatt,A., Pawlita,M., Schmitt,M. ( 2013 ) High-throughput SNP-based authentication of human cell lines Int J Cancer 132 (2) :308-314.

http://www.ncbi.nlm.nih.gov/pubmed/22700458
2013 Brack,C., Mikolasch,A., Pukall,R., Schumann,P., Köster,M., Schauer,F. ( 2013 ) Bacteriolytic Bacillus species isolated from brackish waters of the Southern Baltic Sea Mar Biol

2013 Rohde,C., Smith,D., Martin,D., Fritze,D., Stalpers,J. ( 2013 ) Code of Conduct on Biosecurity for Biological Resource Centres (BRCs) - Procedural implementation Int J Syst Evol Microbiol

http://www.ncbi.nlm.nih.gov/pubmed/23667143
2013 Meklat,A., Bouras,N., Zitouni,A., Mathieu,F., Lebrihi,A., Schumann,P., Sproer,C., Klenk,H.P., Sabaou,N. ( 2013 ) Actinopolyspora mzabensis sp. nov., a novel halophilic actinomycete isolated from a Saharan soil of Algeria Int J Syst Evol Microbiol

http://www.ncbi.nlm.nih.gov/pubmed/23667146
2013 Spring,S., Riedel,T., Spröer,C., Yan,S., Harder,J., Fuchs,B.M. ( 2013 ) Taxonomy and evolution of bacteriochlorophyll a-containing members of the OM60/NOR5 clade of marine gammaproteobacteria: description of Luminiphilus syltensis gen. nov., sp. nov., reclassification of Haliea rubra as Pseudohaliea rubra gen. nov., comb. nov., and emendation of Chromatocurvus halotolerans BMC Microbiol 13 :118.

http://www.ncbi.nlm.nih.gov/pubmed/23705883
2013 Spring,S., Riedel,T. ( 2013 ) Mixotrophic growth of bacteriochlorophyll a-containing members of the OM60/NOR5 clade of marine gammaproteobacteria is carbon-starvation independent and correlates with the type of carbon source and oxygen availability BMC Microbiol 13 :117.

http://www.ncbi.nlm.nih.gov/pubmed/23705861
2013 Montero-Calasanz,M.D., Göker,M., Pötter,G., Rohde,M., Spröer,C., Schumann,P., Gorbushina,A.A., Klenk,H.P. ( 2013 ) Geodermatophilus africanus sp. nov., a halotolerant actinomycete isolated from Saharan desert sand Antonie Van Leeuwenhoek

http://www.ncbi.nlm.nih.gov/pubmed/23723018
2013 Meier-Kolthoff,J.P., Göker,M., Spröer,C., Klenk,H.P. ( 2013 ) When should a DDH experiment be mandatory in microbial taxonomy? Arch Microbiol 195 (6) :413-8.

http://www.ncbi.nlm.nih.gov/pubmed/23591456
2013 Meklat,A., Bouras,N., Zitouni,A., Mathieu,F., Lebrihi,A., Schumann,P., Spröer,C., Klenk,H.P., Sabaou,N. ( 2013 ) Actinopolyspora righensis sp. nov., a novel halophilic actinomycete isolated from Saharan soil in Algeria Antonie Van Leeuwenhoek

http://www.ncbi.nlm.nih.gov/pubmed/23754661
2013 Li,H.W., Zhi,X.Y., Yao,J.C., Zhou,Y., Tang,S.K., Klenk,H.P., Zhao,J., Li,W.J. ( 2013 ) Comparative genomic analysis of the genus Nocardiopsis provides new insights into its genetic mechanisms of environmental adaptability PLoS One 8 (4) :e61528.

http://www.ncbi.nlm.nih.gov/pubmed/23626695
2013 Hernandez-Sanchez,V., Lang,E., Wittich,R.M. ( 2013 ) The Three-Species Consortium of Genetically Improved Strains Cupriavidus necator RW112, Burkholderia xenovorans RW118, and Pseudomonas pseudoalcaligenes RW120 Grows with Technical Polychlorobiphenyl, Aroclor 1242 Front Microbiol 4 :90.

http://www.ncbi.nlm.nih.gov/pubmed/23658554
2013 Cheng,J., Chen,W., Huo-Zhang,B., Nimaichand,S., Zhou,E.M., Lu,X.H., Klenk,H.P., Li,W.J. ( 2013 ) Microlunatus cavernae sp. nov., a novel actinobacterium isolated from Alu ancient cave, Yunnan, south-west China Antonie Van Leeuwenhoek 104 (1) :95-101.

http://www.ncbi.nlm.nih.gov/pubmed/23653120
2013 Smith,S., Fritze,D., Stackebrandt,E. ( 2013 ) Public Service Collections and Biological Resource Centers of Microorganisms The Prokaryotes :267-304.

2013 Göker,M., Klenk,H.-P. ( 2013 ) Phylogeny-driven target selection for genome-sequencing (and other) projects Stand Genomic Sci 8 :360-374.

2013 Stackebrandt,E., Chertkov,O., Lapidus,A., Nolan,M., Lucas,S., Hammon,N., Deshpande,S., Cheng,J.-F., Tapia,R., Goodwin,L.A., Pitluck,S., Liolios,K., Pagani,I., Ivanova,N., Mavromatis,K., Mikhailova,N., Huntemann,M., Pati,A., Chen,A., Palaniappan,K., Land,M., Pan,C., Rohde,M., Gronow,S., Göker,M., Detter,J.C., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Woyke,T., Kyrpides,N.C., Klenk,H.-P. ( 2013 ) Complete genome sequence of the free-living aerobic spirochete Turneriella parva type strain (HT) Stand Genomic Sci 8 :228-238.

2013 Huntemann,M., Stackebrandt,E., Held,B., Nolan,M., Lucas,S., Hammon,N., Deshpande,S., Cheng,J.F., Tapia,R., Goodwin,L.A., Pitluck,S., Liolios,K., Pagani,I., Ivanova,N., Mavromatis,K., Mikhailova,N., Pati,A., Chen,A., Palaniappan,K., Land,M., Rohde,M., Gronow,S., Göker,M., Detter,J.C., Bristow,J., Eisen,J.A., Markowitz,V., Woyke,T., Hugenholtz,P., Kyrpides,N.C., Klenk,H.-P., Lapidus,A. ( 2013 ) Genome sequence of the phylogenetically isolated spirochete Leptonema illini type strain (3055T) Stand Genomic Sci 8 :177-187.

2013 Liolios,K., Abt,B., Scheuner,C., Teshima,H., Held,B., Lapidus,A., Nolan,M., Lucas,S., Deshpande,S., Cheng,J.F., Tapia,R., Goodwin,L.A., Pitluck,S., Pagani,I., Ivanova,N., Mavromatis,K., Mikhailova,N., Huntemann,M., Pati,A., Chen,A., Palaniappan,K., Land,M., Rohde,M., Tindall,B.J., Detter,J.C., Göker,M., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Woyke,T., Klenk,H.-P., Kyrpides,N.C. ( 2013 ) Complete genome sequence of the halophilic bacterium Spirochaeta africana type strain (Z-7692T) from the alkaline Lake Magadi in the East African Rift. Stand Genomic Sci 7 :165-176.

2013 Abt,B., Göker,M., Scheuner,C., Han,C., Lu,M., Misra,M., Lapidus,A., Nolan,M., Lucas,S., Hammon,N., Deshpande,S., Chang,J.F., Tapia,R., Goodwin,L.A., Pitluck,S., Liolios,K., Pagani,I., Ivanova,N., Mavromatis,K., Mikhailova,N., Huntemann,M., Pati,A., Chen,A., Palaniappan,K., Land,M., Hauser,L., Jeffries,C.D., Rohde,M., Spring,S., Gronow,S., Detter,J.C., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Kyrpides,N.C., Woyke,T., Klenk,H.-P. ( 2013 ) Genome sequence of the thermophilic fresh-water bacterium Spirochaeta caldaria type strain (H1T), reclassification of Spirochaeta caldaria, Spirochaeta stenostrepta, and Spirochaeta zuelzerae in the genus Treponema as Treponema caldaria comb. nov., Treponema stenostrepta comb. nov., and Treponema zuelzerae comb. nov., and emendation of the genus Treponema. Stand Genomic Sci 8 :88-105.

2013 Visser,M., Worm,P., Muyzer,G., Pereira,I.A.C., Schaap,P.J., Plugge,C.M., Kuever,J., Parshina,S.N., Nazina,T.N., Ivanova,A.E., Bernier-Latmani,R., Goodwin,L.A., Kyrpides,N.C., Woyke,T., Chain,P., Davenport,K.W., Spring,S., Klenk,H.-P., Stams,A. ( 2013 ) Genome analysis of Desulfotomaculum kuznetsovii strain 17T reveals a physiological similarity with Pelotomaculum thermopropionicum SIT Stand Genomic Sci 8 :69-87.

2013 Mavromatis,K., Stackebrandt,E., Held,B., Lapidus,A., Nolan,M., Lucas,S., Hammon,N., Deshpande,S., Cheng,J.-F., Tapia,R., Goodwin,L.A., Pitluck,S., Liolios,K., Pagani,I., Ivanova,N., Mikhailova,N., Huntemann,M., Pati,A., Chen,A., Palaniappan,K., Land,M., Rohde,M., Spring,S., Göker,M., Woyke,T., Detter,J.C., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Klenk,H.-P., Kyrpides,N. ( 2013 ) Complete genome sequence of the moderate thermophile Anaerobaculum mobile type strain (NGAT). Stand Genomic Sci 8 :47-57.

2013 Stackebrandt,E., Chertkov,O., Lapidus,A., Nolan,M., Lucas,S., Han,C., Cheng,J.F., Tapia,R., Goodwin,L.A., Bruce,D., Pitluck,S., Liolios,K., Mavromatis,K., Pagani,I., Ivanova,N., Mikhailova,N., Huntemann,M., Pati,A., Chen,A., Palaniappan,K., Rohde,M., Tindall,B.J., Göker,M., Woyke,T., Detter,J.C., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Klenk,H.-P., Kyrpides,N. ( 2013 ) High-quality-draft genome sequence of the yellow-pigmented flavobacterium Joostella marina type strain (En5T) Stand Genomic Sci 8 :37-46.

2013 Mavromatis,K., Stackebrandt,E., Munk,C., Lapidus,A., Nolan,M., Lucas,S., Hammon,N., Deshpande,S., Cheng,J.-F., Tapia,R., Goodwin,L.A., Pitluck,S., Liolios,K., Pagani,I., Ivanova,N., Mikhailova,N., Huntemann,M., Pati,A., Chen,A., Palaniappan,K., Land,M., Hauser,L., Rohde,M., Gronow,S., Göker,M., Detter,J.C., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Kyrpides,N.C., Klenk,H.-P., Woyke,T. ( 2013 ) Complete genome sequence of the bile-resistant pigment-producing anaerobe Alistipes finegoldii type strain (AHN2437T) Stand Genomic Sci 8 :26-36.

2013 Stackebrandt,E., Zeytun,A., Lapidus,A., Nolan,M., Lucas,S., Hammon,N., Deshpande,S., Cheng,J.-F., Tapia,R., Goodwin,L.A., Pitluck,S., Liolios,K., Pagani,I., Ivanova,N., Mavromatis,K., Mikhailova,N., Huntemann,M., Pati,A., Chen,A., Palaniappan,K., Chang,Y.-J., Land,M., Hauser,L., Rohde,M., Pukall,R., Göker,M., Detter,J.C., Woyke,T., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Kyrpides,N.C., Klenk,H.-P. ( 2013 ) Complete genome sequence of Coriobacterium glomerans type strain (PW2T) from the midgut of Pyrrhocoris apterus L. (red soldier bug) Stand Genomic Sci 8 :15-25.

2013 Fiebig,A., Pradella,S., Petersen,J., Michael,V., Päuker,O., Rohde,M., Göker,M., Klenk,H.-P., Wagner-Döbler,I. ( 2013 ) Genome of the marine alphaproteobacterium Hoeflea phototrophica type strain (DFL-43T) Stand Genomic Sci 7 :440-448.

2013 Vaas,L.A., Sikorski,J., Hofner,B., Fiebig,A., Buddruhs,N., Klenk,H.P., Göker,M. ( 2013 ) opm: an R package for analysing OmniLog(R) phenotype microarray data Bioinformatics

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2013 Fiebig,A., Pradella,S., Petersen,J., Päuker,O., Michael,V., Lünsdorf,H., Göker,M., Klenk,H.-P., Wagner-Döbler,I. ( 2013 ) Genome of the R-body producing marine alphaproteobacterium Labrenzia alexandrii type strain (DFL-11T) Stand Genomic Sci 7 :413-426.

2013 Foesel,B.U., Nagele,V., Naether,A., Wust,P.K., Weinert,J., Bonkowski,M., Lohaus,G., Polle,A., Alt,F., Oelmann,Y., Fischer,M., Friedrich,M.W., Overmann,J. ( 2013 ) Determinants of Acidobacteria activity inferred from the relative abundances of 16S rRNA transcripts in German grassland and forest soils Environ Microbiol

http://www.ncbi.nlm.nih.gov/pubmed/23802854
2013 Zhu,W.Y., Zhang,J.L., Qin,Y.L., Xiong,Z.J., Zhang,D.F., Klenk,H.P., Zhao,L.X., Xu,L.H., Li,W.J. ( 2013 ) Blastococcus endophyticus sp. nov., a novel actinobacterium isolated from Camptotheca acuminata Decne Int J Syst Evol Microbiol

http://www.ncbi.nlm.nih.gov/pubmed/23475341
2013 Freese,H.M., Martin-Creuzburg,D. ( 2013 ) Food quality of mixed bacteria-algae diets for Daphnia magna Hydrobiologia

2012 Vaas,L.A., Marheine,M., Seufert,S., Schumacher,H.M., Kiesecker,H., Heine-Dobbernack,E. ( 2012 ) Impact of pr-10a overexpression on the cryopreservation success of Solanum tuberosum suspension cultures Plant Cell Rep 31 (6) :1061-1071.

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2012 Naether,A., Foesel,B.U., Naegele,V., Wüst,P.K., Weinert,J., Bonkowski,M., Alt,F., Oelmann,Y., Polle,A., Lohaus,G., Gockel,S., Hemp,A., Kalko,E.K., Linsenmair,K.E., Pfeiffer,S., Renner,S., Schöning,I., Weisser,W.W., Wells,K., Fischer,M., Overmann,J., Friedrich,M.W. ( 2012 ) Environmental Factors Affect Acidobacterial Communities below the Subgroup Level in Grassland and Forest Soils Appl Environ Microbiol 78 (20) :7398-7406.

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2012 Gich,F., Janys,M.A., König,M., Overmann,J. ( 2012 ) Enrichment of previously uncultured bacteria from natural complex communities by adhesion to solid surfaces Environ Microbiol 14 (11) :2984-2997.

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2012 Söhngen,C., Bunk,B., Overmann,J. ( 2012 ) Innovative Datenmobilisierung am deutschen GBIF Knoten Bakterien und Archaeen - Grundlage für Biodiversitätsanalysen der nächsten Generation GfBS news 26 :8-12.

2012 Birkhofer,K., Schöning,I., Alt,F., Herold,N., Klarner,B., Maraun,M., Marhan,S., Oelmann,Y., Wubet,T., Yurkov,A., Begerow,D., Berner,D., Buscot,F., Daniel,R., Diekötter,T., Ehnes,R.B., Erdmann,G., Fischer,C., Foesel,B., Groh,J., Gutknecht,J., Kandeler,E., Lang,C., Lohaus,G., Meyer,A., Nacke,H., Nather,A., Overmann,J., Polle,A., Pollierer,M.M., Scheu,S., Schloter,M., Schulze,E.D., Schulze,W., Weinert,J., Weisser,W.W., Wolters,V., Schrumpf,M. ( 2012 ) General Relationships between Abiotic Soil Properties and Soil Biota across Spatial Scales and Different Land-Use Types PLoS ONE 7 (8) :e43292.

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2012 Selezska,K., Kazmierczak,M., Musken,M., Garbe,J., Schobert,M., Haussler,S., Wiehlmann,L., Rohde,C., Sikorski,J. ( 2012 ) Pseudomonas aeruginosa population structure revisited under environmental focus: impact of water quality and phage pressure Environ Microbiol 14 (8) :1952-1967.

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2012 Liu,Z., Frigaard,N.U., Vogl,K., Iino,T., Ohkuma,M., Overmann,J., Bryant,D.A. ( 2012 ) Complete genome of Ignavibacterium album, a metabolically versatile, flagellated, facultative anaerobe from the phylum Chlorobi Front Microbiol 3 :185.

http://www.ncbi.nlm.nih.gov/pubmed/22661972
2012 Pester,M., Rattei,T., Flechl,S., Gröngröft,A., Richter,A., Overmann,J., Reinhold-Hurek,B., Loy,A., Wagner,M. ( 2012 ) amoA-based consensus phylogeny of ammonia-oxidizing archaea and deep sequencing of amoA genes from soils of four different geographic regions Environ Microbiol 14 (2) :525-539.

http://www.ncbi.nlm.nih.gov/pubmed/22141924
2012 Rücker,O., Köhler,A., Behammer,B., Sichau,K., Overmann,J. ( 2012 ) Puf operon sequences and inferred structures of light-harvesting complexes of three closely related Chromatiaceae exhibiting different absorption characteristics Arch Microbiol 194 (2) :123-134.

http://www.ncbi.nlm.nih.gov/pubmed/21805371
2012 Götz,M., Popovski,S., Kollenberg,M., Gorovits,R., Brown,J.K., Cicero,J.M., Czosnek,H., Winter,S., Ghanim,M. ( 2012 ) Implication of Bemisia tabaci heat shock protein 70 in Begomovirus-whitefly interactions J Virol 86 (24) :13241-52.

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2012 Hamed,K., Menzel,W., Mohamed,M.E., Dafallah,G., Gadelseed,A.M.A., Winter,S. ( 2012 ) First Report of Shallot virus X in Onion in Sudan Plant Disease 96 (7) :1075-1075.

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2012 Ochwo-Ssemakula,M., Hakiza,J.J., Adipala,E., Edema,R., Redinbaugh,M.G., Aritua,V., Winter,S. ( 2012 ) Characterization and distribution of a Potyvirus associated with passion fruit woodiness disease in Uganda Plant Dis. 96 :659-665.

2012 Martelli,G.P., AbouGhanem-Sabanadzovic,N., Agranovsky,A.A., AlRwahnih,M., Dolja,V.V., Dovas,C.I., Fuchs,M., Gugerli,P., Hu,J.S., Jelkmann,W., Katis,N.I., Maliogka,V.I., Melzer,M.J., Menzel,W., Minafra,A., Rott,M.E., Rowhani,A., Sabanadzovic,S., Saldarelli,P. ( 2012 ) Taxonomic revision of the family Closteroviridae with special reference to the grapevine leafroll-associated members of the genus Ampleovirus and the putative species unassigned to the family Journal of Plant Pathology 94 :7-19.

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2012 Menzel,W., Hamacher,J., Weissbrodt,S., Winter,S. ( 2012 ) Complete Nucleotide Sequence of the RNA 3 of Bacopa chlorosis virus and Production of Polyclonal Antibodies to a Recombinant Coat Protein Journal of Phytopathology 160 (3) :163-165.

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2012 Stielow,J.B., Bratek,Z., Klenk,H.P., Winter,S., Menzel,W. ( 2012 ) A novel mitovirus from the hypogeous ectomycorrhizal fungus Tuber excavatum Arch Virol. 157 :787-790.

http://www.ncbi.nlm.nih.gov/pubmed/22286751
2012 Abraham,A., Menzel,W., Vetten,H.J., Winter,S. ( 2012 ) Analysis of the tomato mild mottle virus genome indicates that it is the most divergent member of the genus Ipomovirus (family Potyviridae) Arch Virol. 157 (2) :353-357.

http://www.ncbi.nlm.nih.gov/pubmed/22080188
2012 Jelkmann,W., Mikona,C., Turturo,C., Navarro,B., Rott,M.E., Menzel,W., Saldarelli,P., Minafra,A., Martelli,G.P. ( 2012 ) Molecular characterization and taxonomy of grapevine leafroll-associated virus 7 Arch Virol. 157 (2) :359-362.

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2012 Menzel,W., Winter,S. ( 2012 ) Sequencing of the Tamus red mosaic virus genome: further evidence that it is a distinct species of the genus Potexvirus Virus Genes 44 (1) :120-123.

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2012 Margesin,R., Sproer,C., Zhang,D.C., Busse,H.J. ( 2012 ) Polaromonas glacialis sp. nov. and Polaromonas cryoconiti sp. nov., isolated from alpine glacier cryoconite Int J Syst Evol Microbiol 62 (Pt 11) :2662-2668.

http://www.ncbi.nlm.nih.gov/pubmed/22199222
2012 Vaishampayan,P., Moissl-Eichinger,C., Pukall,R., Schumann,P., Sproer,C., Augustus,A., HaydenRoberts,A., Namba,G., Cisneros,J., Salmassi,T., Venkateswaran,K. ( 2012 ) Description of Tersicoccus phoenicis gen. nov., sp. nov. isolated from spacecraft assembly clean room environments Int J Syst Evol Microbiol

http://www.ncbi.nlm.nih.gov/pubmed/23223813
2012 Raj,P.S., Sasikala,C., Ramaprasad,E.V., Subhash,Y., Busse,H.J., Schumann,P., Ramana,C.V. ( 2012 ) Chryseomicrobium amylolyticum sp. nov., isolated from a semi-arid tropical soil and emended descriptions of the genus Chryseomicrobium and Chyseomicrobium imtechense Int J Syst Evol Microbiol

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2012 Montero-Calasanz,M.D., Goker,M., Potter,G., Rohde,M., Sproer,C., Schumann,P., Klenk,H.P., Gorbushina,A.A. ( 2012 ) Geodermatophilus telluris sp. nov., a novel actinomycete isolated from Saharan desert sand in Chad Int J Syst Evol Microbiol

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2012 Almeida,B., Vaz-Moreira,I., Schumann,P., Nunes,O.C., Carvalho,G., BarretoCrespo,M.T. ( 2012 ) Patulibacter medicamentivorans sp. nov., isolated from activated sludge of a wastewater treatment plant Int J Syst Evol Microbiol

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2012 Richter,J., Schlesner,M., Hoffmann,S., Kreuz,M., Leich,E., Burkhardt,B., Rosolowski,M., Ammerpohl,O., Wagener,R., Bernhart,S.H., Lenze,D., Szczepanowski,M., Paulsen,M., Lipinski,S., Russell,R.B., Adam-Klages,S., Apic,G., Claviez,A., Hasenclever,D., Hovestadt,V., Hornig,N., Korbel,J.O., Kube,D., Langenberger,D., Lawerenz,C., Lisfeld,J., Meyer,K., Picelli,S., Pischimarov,J., Radlwimmer,B., Rausch,T., Rohde,M., Schilhabel,M., Scholtysik,R., Spang,R., Trautmann,H., Zenz,T., Borkhardt,A., Drexler,H.G., Moller,P., MacLeod,R.A.F., Pott,C., Schreiber,S., Trumper,L., Loeffler,M., Stadler,P.F., Lichter,P., Eils,R., Kuppers,R., Hummel,M., Klapper,W., Rosenstiel,P., Rosenwald,A., Brors,B., Siebert,R., Project,t.I.M.-S. ( 2012 ) Recurrent mutation of the ID3 gene in Burkitt lymphoma identified by integrated genome, exome and transcriptome sequencing Nat Genet 44 (12) :1316-1320.

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2012 Yan,L., Ping,N., Zhu,M., Sun,A., Xue,Y., Ruan,C., Drexler,H.G., MacLeod,R.A.F., Wu,D., Chen,S. ( 2012 ) Clinical, immunophenotypic, cytogenetic, and molecular genetic features in 117 adult patients with mixed-phenotype acute leukemia defined by WHO-2008 classification Haematologica 97 (11) :1708-12.

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2012 Uphoff,C.C., Denkmann,S.A., Drexler,H.G. ( 2012 ) Treatment of Mycoplasma contamination in cell cultures with plasmocin J Biomed Biotechnol 2012 :267678.

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2012 Nagel,S., Ehrentraut,S., Tomasch,J., Lienenklaus,S., Schneider,B., Geffers,R., Meyer,C., Kaufmann,M., Drexler,H.G., MacLeod,R.A.F. ( 2012 ) Transcriptional activation of prostate specific homeobox gene NKX3-1 in subsets of T-cell lymphoblastic leukemia (T-ALL) PLoS One 7 (7) :e40747.

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