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Publications of the DSMZ

Here you will find a complete list of all scientific publications.

Publications
2013 Schumann,P., Pukall,R., Sproer,C., Stackebrandt,E. ( 2013 ) Reclassification of Koreibacter algae as a later heterotypic synonym of Paraoerskovia marina and emended descriptions of the genus Paraoerskovia Khan et al. 2009 and of Paraoerskovia marina Khan et al. 2009 Int J Syst Evol Microbiol 63 (Pt 1) :219-23.

http://www.ncbi.nlm.nih.gov/pubmed/22389283
2013 Hanafy,M.S., El-Banna,A., Schumacher,H.M., Jacobsen,H.J., Hassan,F.S. ( 2013 ) Enhanced tolerance to drought and salt stresses in transgenic faba bean (Vicia faba L.) plants by heterologous expression of the PR10a gene from potato Plant Cell Rep 32 (5) :663-74.

http://www.ncbi.nlm.nih.gov/pubmed/23455709
2013 Montero-Calasanz,M.D., Goker,M., Potter,G., Rohde,M., Sproer,C., Schumann,P., Gorbushina,A.A., Klenk,H.P. ( 2013 ) Geodermatophilus normandii sp. nov., isolated from Saharan desert sand Int J Syst Evol Microbiol

http://www.ncbi.nlm.nih.gov/pubmed/23543496
2013 Mohammadipanah,F., Hamedi,J., Goker,M., Fiebig,A., Pukall,R., Sproer,C., Klenk,H.P. ( 2013 ) Kribbella shirazensis sp. nov., isolated from soil of Shiraz in Iran Int J Syst Evol Microbiol

http://www.ncbi.nlm.nih.gov/pubmed/23524355
2013 Lang,E., Schumann,P., Adler,S., Sproer,C., Sahin,N. ( 2013 ) Azorhizobium oxalatiphilum sp. nov., and emended description of the genus Azorhizobium Int J Syst Evol Microbiol 63 (Pt 4) :1505-1511.

http://www.ncbi.nlm.nih.gov/pubmed/22888185
2013 Gaboyer,F., Tindall,B.J., Ciobanu,M.C., Duthoit,F., LeRomancer,M., Alain,K. ( 2013 ) Phaeobacter leonis sp. nov., a novel alphaproteobacterium from Mediterranean Sea sediments Int J Syst Evol Microbiol

http://www.ncbi.nlm.nih.gov/pubmed/23475346
2013 Ezeoke,I., Klenk,H.P., Pötter,G., Schumann,P., Moser,B.D., Lasker,B.A., Nicholson,A., Brown,J.M. ( 2013 ) Nocardia amikacinitolerans sp. nov., an amikacin-resistant human pathogen Int J Syst Evol Microbiol 63 (Pt 3) :1056-1061.

http://www.ncbi.nlm.nih.gov/pubmed/22707533
2013 Konstantinidis,K., Stackebrandt,E. ( 2013 ) Defining taxonomic ranks. The Prokaryotes :267-304.

2013 Yarza,P., Sproer,C., Swiderski,J., Mrotzek,N., Spring,S., Tindall,B.J., Gronow,S., Pukall,R., Klenk,H.P., Lang,E., Verbarg,S., Crouch,A., Lilburn,T., Beck,B., Unosson,C., Cardew,S., Moore,E.R., Gomila,M., Nakagawa,Y., Janssens,D., DeVos,P., Peiren,J., Suttels,T., Clermont,D., Bizet,C., Sakamoto,M., Iida,T., Kudo,T., Kosako,Y., Oshida,Y., Ohkuma,M., D,R.A., Spieck,E., PommereningRoeser,A., Figge,M., Park,D., Buchanan,P., Cifuentes,A., Munoz,R., Euzeby,J.P., Schleifer,K.H., Ludwig,W., Amann,R., Glockner,F.O., Rossello-Mora,R. ( 2013 ) Sequencing orphan species initiative (SOS): Filling the gaps in the 16S rRNA gene sequence database for all species with validly published names Syst Appl Microbiol 36 (1) :69-73.

http://www.ncbi.nlm.nih.gov/pubmed/23410935
2013 Verma,P., Seong,C.N., Pandey,P.K., Bhonde,R.R., Sproer,C., Rohde,M., Shouche,Y.S. ( 2013 ) Bhargavaea indica sp. nov., a member of the phylum Firmicutes, isolated from Arabian Sea sediment J Microbiol 51 (1) :36-42.

http://www.ncbi.nlm.nih.gov/pubmed/23456710
2013 Riedel,T., Gomez-Consarnau,L., Tomasch,J., Martin,M., Jarek,M., Gonzalez,J.M., Spring,S., Rohlfs,M., Brinkhoff,T., Cypionka,H., Goker,M., Fiebig,A., Klein,J., Goesmann,A., Fuhrman,J.A., Wagner-Dobler,I. ( 2013 ) Genomics and physiology of a marine flavobacterium encoding a proteorhodopsin and a xanthorhodopsin-like protein PLoS One 8 (3) :e57487.

http://www.ncbi.nlm.nih.gov/pubmed/23526944
2013 Meklat,A., Bouras,N., Zitouni,A., Mathieu,F., Lebrihi,A., Schumann,P., Sproer,C., Klenk,H.P., Sabaou,N. ( 2013 ) Actinopolyspora saharensis sp. nov., a novel halophilic actinomycete isolated from a Saharan soil of Algeria Antonie Van Leeuwenhoek 103 (4) :771-776.

http://www.ncbi.nlm.nih.gov/pubmed/23196893
2013 Petersen,J., Frank,O., Göker,M., Pradella,S. ( 2013 ) Extrachromosomal, extraordinary and essential-the plasmids of the Roseobacter clade. Appl Microbiol Biotechnol. 97 (7) :2805-2815.

http://www.ncbi.nlm.nih.gov/pubmed/23435940
2013 Montero-Calasanz,M.C., Göker,M., Rohde,M., Schumann,P., Pötter,G., Spröer,C., Gorbushina,A.A., Klenk,H.-P. ( 2013 ) Geodermatophilus siccatus sp. nov., isolated from arid sand of the Saharan desert in Chad. Antonie Van Leeuwenhoek 103 (3) :449-456.

http://www.ncbi.nlm.nih.gov/pubmed/23076796
2013 Montero-Calasanz,M.C., Göker,M., Pötter,G., Rohde,M., Spröer,C., Schumann,P., Gorbushina,A.A., Klenk,H.P. ( 2013 ) Geodermatophilus saharensis sp. nov., isolated from sand of the Saharan desert in Chad Arch Microbiol 195 (3) :153-159.

http://www.ncbi.nlm.nih.gov/pubmed/23269498
2013 Montero-Calasanz,M.C., Göker,M., Broughton,W.J., Cattaneo,A., Favet,J., Pötter,G., Rohde,M., Spröer,C., Schumann,P., Klenk,H.-P., Gorbushina,A.A. ( 2013 ) Geodermatophilus tzadiensis sp. nov., a UV radiation-resistant bacterium isolated from sand of the Saharan desert Syst Appl Microbiol 36 (3) :177-182.

http://www.ncbi.nlm.nih.gov/pubmed/23415483
2013 Meier-Kolthoff,J.P., Auch,A.F., Klenk,H.-P., Göker,M. ( 2013 ) Genome sequence-based species delimitation with confidence intervals and improved distance functions BMC Bioinformatics 14 (1) :60.

http://www.ncbi.nlm.nih.gov/pubmed/23432962
2013 Makonde,H.M., Boga,H.I., Osiemo,Z., Mwirichia,R., Stielow,J.B., Göker,M., Klenk,H.-P. ( 2013 ) Diversity of termitomyces associated with fungus-farming termites assessed by cultural and culture-independent methods. PLoS One 8 (2) :e56464.

http://www.ncbi.nlm.nih.gov/pubmed/23437139
2013 Carro,L., Pukall,R., Spröer,C., Kroppenstedt,R.M., Trujillo,M.E. ( 2013 ) Micromonospora halotolerans sp. nov., isolated from the rhizosphere of a Pisum sativum plant Antonie Van Leeuwenhoek. 103 (6) :1245-1254.

http://www.ncbi.nlm.nih.gov/pubmed/23494330
2013 Liu,Z., Muller,J., Li,T., Alvey,R.M., Vogl,K., Frigaard,N.U., Rockwell,N.C., Boyd,E.S., Tomsho,L.P., Schuster,S.C., Henke,P., Rohde,M., Overmann,J., Bryant,D.A. ( 2013 ) Genomic analysis reveals key aspects of prokaryotic symbiosis in the phototrophic consortium "Chlorochromatium aggregatum" Genome Biol 14 (11) :R127.

2013 Freese,H.M., Dalingault,H., Petersen,J., Pradella,S., Davenport,K., Teshima,H., Chen,A., Pati,A., Ivanova,N., Goodwin,L.A., Chain,P., Detter,J.C., Rohde,M., Gronow,S., Kyrpides,N.C., Woyke,T., Brinkhoff,T., Göker,M., Overmann,J., Klenk,H.P. ( 2013 ) Genome sequence of the phage-gene rich marine Phaeobacter arcticus type strain DSM 23566(T.) Stand Genomic Sci 8 (3) :450-64.

2013 Lefevre,C.T., Trubitsyn,D., Abreu,F., Kolinko,S., Jogler,C., deAlmeida,L.G., deVasconcelos,A.T., Kube,M., Reinhardt,R., Lins,U., Pignol,D., Schuler,D., Bazylinski,D.A., Ginet,N. ( 2013 ) Comparative genomic analysis of magnetotactic bacteria from the Deltaproteobacteria provides new insights into magnetite and greigite magnetosome genes required for magnetotaxis Environ Microbiol

http://www.ncbi.nlm.nih.gov/pubmed/23607663
2013 Vaas,L.A., Sikorski,J., Hofner,B., Fiebig,A., Buddruhs,N., Klenk,H.P., Göker,M. ( 2013 ) opm: an R package for analysing OmniLog(R) phenotype microarray data Bioinformatics

http://www.ncbi.nlm.nih.gov/pubmed/23740744
2013 Jogler,M., Chen,H., Simon,J., Rohde,M., Busse,H.J., Klenk,H.P., Tindall,B.J., Overmann,J. ( 2013 ) Description of Sphingorhabdus planktonica gen. nov., sp. nov. and reclassification of three related members of the genus Sphingopyxis in the genus Sphingorhabdus gen. nov Int J Syst Evol Microbiol 63 (Pt 4) :1342-1349.

http://www.ncbi.nlm.nih.gov/pubmed/22798658
2013 Chen,H., Jogler,M., Tindall,B.J., Klenk,H.P., Rohde,M., Busse,H.J., Overmann,J. ( 2013 ) Sphingomonas starnbergensis sp. nov., isolated from a prealpine freshwater lake Int J Syst Evol Microbiol 63 (Pt 3) :1017-1023.

http://www.ncbi.nlm.nih.gov/pubmed/22685105
2013 Monde,G., Bolonge,P., Bolamba,F., Walangululu,J., Winter,S., Bragard,C. ( 2013 ) Impact of African Cassava Mosaic Disease on the Production of Fourteen Cultivars of Cassava in Yangambi, Democratic Republic of Congo Tropicultura 31 (2) :91-97.

2013 Roenhorst,J.W., Boonham,N., Winter,S., Menzel,W., vanderVlugt,R.A.A. ( 2013 ) The plant viruses and viroids database and collections of Q-bank EPPO Bulletin 43 (2) :238-243.

2013 Ahangaran,A., Habibi,M.K., Mohammadi,G.H., Winter,S., Garcia-Arenal,F. ( 2013 ) Analysis of Soybean mosaic virus genetic diversity in Iran allows the characterization of a new mutation resulting in overcoming Rsv4-resistance J Gen Virol 94 (Pt 11) :2557-68.

http://www.ncbi.nlm.nih.gov/pubmed/23939982
2013 Bananej,K., Menzel,W., Kianfar,N., Vahdat,A., Winter,S. ( 2013 ) First report of Cucurbit chlorotic yellows virus infecting cucumber, melon, and squash in Iran Plant Disease 97 (7) :1005.

2013 Hamed,K., Menzel,W., Mohamed,M.E., Bakheet,K.A., Winter,S. ( 2013 ) First Report of Garlic common latent virus Infecting Garlic in Sudan Plant Disease 97 (4) :562-562.

http://dx.doi.org/10.1094/PDIS-11-12-1018-PDN
2013 Afouda,L.A.C., Kotchofa,R., Sare,R., Zinsou,V., Winter,S. ( 2013 ) Occurrence and distribution of viruses infecting tomato and pepper in Alibori in northern Benin Phytoparasitica 41 :271-276.

2013 Steen,A., Utkur,F.O., Borrero-deAcuna,J.M., Bunk,B., Roselius,L., Buhler,B., Jahn,D., Schobert,M. ( 2013 ) Construction and characterization of nitrate and nitrite respiring Pseudomonas putida KT2440 strains for anoxic biotechnical applications J Biotechnol 163 (2) :155-165.

http://www.ncbi.nlm.nih.gov/pubmed/23036925
2013 Schomburg,I., Chang,A., Placzek,S., Sohngen,C., Rother,M., Lang,M., Munaretto,C., Ulas,S., Stelzer,M., Grote,A., Scheer,M., Schomburg,D. ( 2013 ) BRENDA in 2013: integrated reactions, kinetic data, enzyme function data, improved disease classification: new options and contents in BRENDA Nucleic Acids Res 41 (Database issue) :D764-D772.

http://www.ncbi.nlm.nih.gov/pubmed/23203881
2013 Meklat,A., Bouras,N., Zitouni,A., Mathieu,F., Lebrihi,A., Schumann,P., Spröer,C., Klenk,H.P., Sabaou,N. ( 2013 ) Actinopolyspora mzabensis sp. nov., a novel halophilic actinomycete isolated from a Saharan soil of Algeria Int J Syst Evol Microbiol

http://www.ncbi.nlm.nih.gov/pubmed/23667146
2013 Buss,S.N., Cole,J.A., Hannett,G.E., Nazarian,E.J., Nazarian,L., Coorevits,A., VanLandschoot,A., DeVos,P., Schumann,P., Musser,K.A., Wolfgang,W.J. ( 2013 ) Hazenella coriacea gen. nov., sp nov. isolated from clinical specimens in New York State Int J Syst Evol Microbiol

http://www.ncbi.nlm.nih.gov/pubmed/23728377
2013 Boubetra,D., Zitouni,A., Bouras,N., Mathieu,F., Lebrihi,A., Schumann,P., Spröer,C., Klenk,H.P., Sabaou,N. ( 2013 ) Saccharothrix saharensis sp. nov., a novel actinomycete isolated from Algerian Saharan soil Int J Syst Evol Microbiol

http://www.ncbi.nlm.nih.gov/pubmed/23645017
2013 Bagheri,M., Amoozegar,M.A., Didari,M., Makhdoumi-Kakhki,A., Schumann,P., Spröer,C., Sanchez-Porro,C., Ventosa,A. ( 2013 ) Marinobacter persicus sp. nov., a moderately halophilic bacterium from a saline lake in Iran Antonie Van Leeuwenhoek 104 (1) :47-54.

http://www.ncbi.nlm.nih.gov/pubmed/23592177
2013 Ziegler,S., Waidner,B., Itoh,T., Schumann,P., Spring,S., Gescher,J. ( 2013 ) Metallibacterium scheffleri gen. nov., sp. nov., an alkalinizing gammaproteobacterium isolated from an acidic biofilm Int J Syst Evol Microbiol 63 (Pt 4) :1499-504.

http://www.ncbi.nlm.nih.gov/pubmed/22863988
2013 Sedlacek,I., Holochova,P., Maslanova,I., Kosina,M., Sproer,C., Bryndova,H., Vandamme,P., Rudolf,I., Hubalek,Z., Svec,P. ( 2013 ) Enterococcus ureilyticus sp. nov. and Enterococcus rotai sp. nov., two urease-producing enterococci from the environment Int J Syst Evol Microbiol 63 (Pt 2) :502-10.

http://www.ncbi.nlm.nih.gov/pubmed/22523160
2013 Penesyan,A., Breider,S., Schumann,P., Tindall,B.J., Egan,S., Brinkhoff,T. ( 2013 ) Epibacterium ulvae gen. nov., sp. nov., epibiotic bacteria isolated from the surface of a marine alga Int J Syst Evol Microbiol 63 (Pt 5) :1589-96.

http://www.ncbi.nlm.nih.gov/pubmed/22904216
2013 Mehrshad,M., Amoozegar,M.A., Didari,M., Bagheri,M., ShahzadehFazeli,S.A., Schumann,P., Sproer,C., Sanchez-Porro,C., Ventosa,A. ( 2013 ) Bacillus halosaccharovorans sp. nov., a moderately halophilic bacterium from a hypersaline Iranian lake Int J Syst Evol Microbiol

http://www.ncbi.nlm.nih.gov/pubmed/23291894
2013 Lang,E., Schumann,P., Knapp,B.A., Kumar,R., Sproer,C., Insam,H. ( 2013 ) Budvicia diplopodorum sp. nov. and emended description of the genus Budvicia Int J Syst Evol Microbiol 63 (Pt 1) :260-267.

http://www.ncbi.nlm.nih.gov/pubmed/22407790
2013 Kim,S.J., Jang,Y.H., Ahn,J.H., Weon,H.Y., Schumann,P., Chun,S.C., Kwon,S.W., Kim,W.G. ( 2013 ) Rudaeicoccus suwonensis gen. nov., sp. nov., an actinobacterium isolated from the epidermal tissue of a root of a Phalaenopsis orchid Int J Syst Evol Microbiol 63 (Pt 4) :1291-1296.

http://www.ncbi.nlm.nih.gov/pubmed/22798654
2013 Kampfer,P., Glaeser,S.P., Schafer,J., Lodders,N., Martin,K., Schumann,P. ( 2013 ) Ornithinimicrobium murale sp. nov., isolated from an indoor wall colonized by moulds Int J Syst Evol Microbiol 63 (Pt 1) :119-123.

http://www.ncbi.nlm.nih.gov/pubmed/22888195
2013 Hamada,M., Tamura,T., Shibata,C., Yamamura,H., Hayakawa,M., Schumann,P., Suzuki,K.I. ( 2013 ) Paraoerskovia sediminicola sp. nov., an actinobacterium isolated from sea sediment, and emended description of the genus Paraoerskovia Int J Syst Evol Microbiol

http://www.ncbi.nlm.nih.gov/pubmed/23291891
2013 Hahnke,S., Tindall,B.J., Schumann,P., Simon,M., Brinkhoff,T. ( 2013 ) Pelagimonas varians gen. nov., sp. nov., isolated from the southern North Sea Int J Syst Evol Microbiol 63 (Pt 3) :835-843.

http://www.ncbi.nlm.nih.gov/pubmed/22611199
2013 Ferreira,T., vanReenen,C.A., Endo,A., Sproer,C., Malan,A.P., Dicks,L.M. ( 2013 ) Description of Xenorhabdus khoisanae sp. nov., the symbiont of the entomopathogenic nematode Steinernema khoisanae Int J Syst Evol Microbiol

http://www.ncbi.nlm.nih.gov/pubmed/23456807
2013 Didari,M., Amoozegar,M.A., Bagheri,M., Mehrshad,M., Schumann,P., Sproer,C., Sanchez-Porro,C., Ventosa,A. ( 2013 ) Bacillus persicus sp. nov., a halophilic bacterium from a hypersaline lake Int J Syst Evol Microbiol 63 (Pt 4) :1229-1234.

http://www.ncbi.nlm.nih.gov/pubmed/22771682
2013 DeBel,A., VanHoorde,K., Wybo,I., Vandoorslaer,K., Echahidi,F., DeBrandt,E., Schumann,P., Ieven,M., Soetens,O., Pierard,D., Vandamme,P. ( 2013 ) Staphylococcus jettensis sp. nov., a novel coagulase-negative staphylococcal species isolated from human clinical specimens Int J Syst Evol Microbiol

http://www.ncbi.nlm.nih.gov/pubmed/23456811
2013 Cousin,S., Motreff,L., Gulat-Okalla,M.L., Gouyette,C., Sproer,C., Schumann,P., Begaud,E., Bouchier,C., Clermont,D., Bizet,C. ( 2013 ) Lactobacillus pasteurii sp. nov. and Lactobacillus hominis sp. nov Int J Syst Evol Microbiol 63 (Pt 1) :53-59.

http://www.ncbi.nlm.nih.gov/pubmed/22328611
2013 Camas,M., Sazak,A., Sproer,C., Klenk,H.P., Cetin,D., Guven,K., Sahin,N. ( 2013 ) Nonomuraea jabiensis sp. nov., isolated from arid soil Int J Syst Evol Microbiol 63 (Pt 1) :212-218.

http://www.ncbi.nlm.nih.gov/pubmed/22389281
2013 Camas,M., Sahin,N., Sazak,A., Spröer,C., Klenk,H.P. ( 2013 ) Amycolatopsis magusensis sp. nov., isolated from soil Int J Syst Evol Microbiol 63 (Pt 4) :1254-1260.

http://www.ncbi.nlm.nih.gov/pubmed/22771685
2013 Boubetra,D., Zitouni,A., Bouras,N., Mathieu,F., Lebrihi,A., Schumann,P., Sproer,C., Klenk,H.P., Sabaou,N. ( 2013 ) Saccharothrix hoggarensis sp. nov., an actinomycete isolated from Saharan soil Int J Syst Evol Microbiol 63 (Pt 2) :549-453.

http://www.ncbi.nlm.nih.gov/pubmed/22523169
2013 Bagheri,M., Amoozegar,M.A., Schumann,P., Didari,M., Mehrshad,M., Sproer,C., Sanchez-Porro,C., Ventosa,A. ( 2013 ) Ornithinibacillus halophilus sp. nov., a moderately halophilic, Gram-stain-positive, endospore-forming bacterium from a hypersaline lake Int J Syst Evol Microbiol 63 (Pt 3) :844-848.

http://www.ncbi.nlm.nih.gov/pubmed/22611200
2013 Amoozegar,M.A., Makhdoumi-Kakhki,A., Ramezani,M., Nikou,M.M., Fazeli,S.A., Schumann,P., Ventosa,A. ( 2013 ) Limimonas halophila gen. nov., sp. nov., an extremely halophilic bacterium in the family Rhodospirillaceae Int J Syst Evol Microbiol 63 (Pt 4) :1562-1567.

http://www.ncbi.nlm.nih.gov/pubmed/22904212
2013 Amoozegar,M.A., Didari,M., Bagheri,M., ShahzadehFazeli,S.A., Schumann,P., Sproer,C., Sanchez-Porro,C., Ventosa,A. ( 2013 ) Bacillus salsus sp. nov., a novel halophilic bacterium from a hypersaline lake Int J Syst Evol Microbiol

http://www.ncbi.nlm.nih.gov/pubmed/23504967
2013 Amoozegar,M.A., Bagheri,M., Didari,M., ShahzedehFazeli,S.A., Schumann,P., Sanchez-Porro,C., Ventosa,A. ( 2013 ) Saliterribacillus persicus gen. nov., sp. nov., a moderately halophilic bacterium isolated from a hypersaline lake Int J Syst Evol Microbiol 63 (Pt 1) :345-351.

http://www.ncbi.nlm.nih.gov/pubmed/22447700
2013 Addou,A.N., Schumann,P., Spröer,C., Bouanane-Darenfed,A., Amarouche-Yala,S., Hacene,H., Cayol,J.L., Fardeau,M.L. ( 2013 ) Melghirimyces thermohalophilus sp. nov., a thermoactinomycete isolated from an Algerian salt lake Int J Syst Evol Microbiol 63 (Pt 5) :1717-1722.

http://www.ncbi.nlm.nih.gov/pubmed/23041632
2013 Chen,H., Jogler,M., Rohde,M., Klenk,H.P., Busse,H.J., Tindall,B.J., Spröer,C., Overmann,J. ( 2013 ) Sphingobium limneticum sp. nov., and Sphingobium boeckii, two novel freshwater planktonic members of the family Sphingomonadaceae, and reclassification of Sphingomonas suberifaciens as Sphingobium suberifaciens comb. nov. Int J Syst Evol Microbiol 63 :735-743.

http://www.ncbi.nlm.nih.gov/pubmed/22561591
2012 Richter,J., Schlesner,M., Hoffmann,S., Kreuz,M., Leich,E., Burkhardt,B., Rosolowski,M., Ammerpohl,O., Wagener,R., Bernhart,S.H., Lenze,D., Szczepanowski,M., Paulsen,M., Lipinski,S., Russell,R.B., Adam-Klages,S., Apic,G., Claviez,A., Hasenclever,D., Hovestadt,V., Hornig,N., Korbel,J.O., Kube,D., Langenberger,D., Lawerenz,C., Lisfeld,J., Meyer,K., Picelli,S., Pischimarov,J., Radlwimmer,B., Rausch,T., Rohde,M., Schilhabel,M., Scholtysik,R., Spang,R., Trautmann,H., Zenz,T., Borkhardt,A., Drexler,H.G., Moller,P., MacLeod,R.A.F., Pott,C., Schreiber,S., Trumper,L., Loeffler,M., Stadler,P.F., Lichter,P., Eils,R., Kuppers,R., Hummel,M., Klapper,W., Rosenstiel,P., Rosenwald,A., Brors,B., Siebert,R., Project,t.I.M.-S. ( 2012 ) Recurrent mutation of the ID3 gene in Burkitt lymphoma identified by integrated genome, exome and transcriptome sequencing Nat Genet 44 (12) :1316-1320.

http://www.ncbi.nlm.nih.gov/pubmed/23143595
2012 Yan,L., Ping,N., Zhu,M., Sun,A., Xue,Y., Ruan,C., Drexler,H.G., MacLeod,R.A.F., Wu,D., Chen,S. ( 2012 ) Clinical, immunophenotypic, cytogenetic, and molecular genetic features in 117 adult patients with mixed-phenotype acute leukemia defined by WHO-2008 classification Haematologica 97 (11) :1708-12.

http://www.ncbi.nlm.nih.gov/pubmed/22581002
2012 Uphoff,C.C., Denkmann,S.A., Drexler,H.G. ( 2012 ) Treatment of Mycoplasma contamination in cell cultures with plasmocin J Biomed Biotechnol 2012 :267678.

http://www.ncbi.nlm.nih.gov/pubmed/23091342
2012 Nagel,S., Ehrentraut,S., Tomasch,J., Lienenklaus,S., Schneider,B., Geffers,R., Meyer,C., Kaufmann,M., Drexler,H.G., MacLeod,R.A.F. ( 2012 ) Transcriptional activation of prostate specific homeobox gene NKX3-1 in subsets of T-cell lymphoblastic leukemia (T-ALL) PLoS One 7 (7) :e40747.

http://www.ncbi.nlm.nih.gov/pubmed/22848398
2012 KalenderAtak,Z., DeKeersmaecker,K., Gianfelici,V., Geerdens,E., Vandepoel,R., Pauwels,D., Porcu,M., Lahortiga,I., Brys,V., Dirks,W.G., Quentmeier,H., Cloos,J., Cuppens,H., Uyttebroeck,A., Vandenberghe,P., Cools,J., Aerts,S. ( 2012 ) High accuracy mutation detection in leukemia on a selected panel of cancer genes PLoS One 7 (6) :e38463.

http://www.ncbi.nlm.nih.gov/pubmed/22675565
2012 Steube,K.G., Koelz,A.L., Uphoff,C.C., Drexler,H.G., Kluess,J., Steinberg,P. ( 2012 ) The necessity of identity assessment of animal intestinal cell lines: A case report Cytotechnology 64 :373-378.

http://www.ncbi.nlm.nih.gov/pubmed/22193509
2012 Tiacci,E., Pucciarini,A., Bigerna,B., Pettirossi,V., Strozzini,F., Martelli,M.P., Tabarrini,A., Drexler,H.G., Falini,B. ( 2012 ) Absence of BRAF-V600E in the human cell lines BONNA-12, ESKOL, HAIR-M, and HC-1 questions their origin from hairy cell leukemia Blood 119 (22) :5332-5333.

http://www.ncbi.nlm.nih.gov/pubmed/22653958
2012 Nagel,S., Schneider,B., Meyer,C., Kaufmann,M., Drexler,H.G., MacLeod,R.A.F. ( 2012 ) Transcriptional deregulation of homeobox gene ZHX2 in Hodgkin lymphoma Leuk.Res 36 (5) :646-655.

http://www.ncbi.nlm.nih.gov/pubmed/22078940
2012 Tiacci,E., Spanhol-Rosseto,A., Martelli,M.P., Pasqualucci,L., Quentmeier,H., Grossmann,V., Drexler,H.G., Falini,B. ( 2012 ) The NPM1 wild-type OCI-AML2 and the NPM1-mutated OCI-AML3 cell lines carry DNMT3A mutations Leukemia 26 (3) :554-557.

http://www.ncbi.nlm.nih.gov/pubmed/21904384
2012 Quentmeier,H., Eberth,S., Romani,J., Weich,H.A., Zaborski,M., Drexler,H.G. ( 2012 ) DNA methylation regulates expression of Vascular Endothelial Growth Factor Receptor 2 (KDR) and Vascular Endothelial Growth Factor Receptor 3 (FLT4) BMC Cancer 12 (1) :19.

http://www.ncbi.nlm.nih.gov/pubmed/22251800
2012 Ammerpohl,O., Haake,A., Pellissery,S., Giefing,M., Richter,J., Balint,B., Kulis,M., Le,J., Bibikova,M., Drexler,H.G., Seifert,M., Shaknovic,R., Korn,B., Kuppers,R., Martin-Subero,J.I., Siebert,R. ( 2012 ) Array-based DNA methylation analysis in classical Hodgkin lymphoma reveals new insights into the mechanisms underlying silencing of B cell-specific genes Leukemia 26 (1) :185-188.

http://www.ncbi.nlm.nih.gov/pubmed/21818115
2012 Schneider,B., Nagel,S., Ehrentraut,S., Kaufmann,M., Meyer,C., Geffers,R., Drexler,H.G., MacLeod,R.A.F. ( 2012 ) Neoplastic MiR-17~92 deregulation at a dna fragility motif (SIDD) Genes Chromosomes Cancer 51 (3) :219-228.

http://www.ncbi.nlm.nih.gov/pubmed/22072491
2012 Naether,A., Foesel,B.U., Naegele,V., Wüst,P.K., Weinert,J., Bonkowski,M., Alt,F., Oelmann,Y., Polle,A., Lohaus,G., Gockel,S., Hemp,A., Kalko,E.K., Linsenmair,K.E., Pfeiffer,S., Renner,S., Schöning,I., Weisser,W.W., Wells,K., Fischer,M., Overmann,J., Friedrich,M.W. ( 2012 ) Environmental Factors Affect Acidobacterial Communities below the Subgroup Level in Grassland and Forest Soils Appl Environ Microbiol 78 (20) :7398-7406.

http://www.ncbi.nlm.nih.gov/pubmed/22885760
2012 Krishnamurthi,S., Spring,S., AnilKumar,P., Mayilraj,S., Klenk,H.P., Suresh,K. ( 2012 ) Desulfotomaculum defluvii sp. nov., a sulfate-reducing bacterium isolated from the subsurface environment of a landfill Int J Syst Evol Microbiol

http://www.ncbi.nlm.nih.gov/pubmed/23159750
2012 Setaro,S.D., Garnica,S., Herrera,P.I., Suárez,J.P., Göker,M. ( 2012 ) A clustering optimization strategy to estimate species richness of Sebacinales in the tropical Andes based on molecular sequences from distinct DNA regions Biodivers Conserv 21 (9) :2269-2285.

2012 Zhang,Y.J., Tang,S.K., Shi,R., Klenk,H.P., Chen,C., Yang,L.L., Zhou,Y., Li,W.J. ( 2012 ) Salinisphaera halophila sp. nov., a moderately halophilic bacterium isolated from brine of a salt well Int J Syst Evol Microbiol 62 (Pt 9) :2174-2179.

http://www.ncbi.nlm.nih.gov/pubmed/22058321
2012 Stieglmeier,M., Rettberg,P., Barczyk,S., Bohmeier,M., Pukall,R., Wirth,R., Moissl-Eichinger,C. ( 2012 ) Abundance and diversity of microbial inhabitants in European spacecraft-associated clean rooms Astrobiology 12 (6) :572-585.

http://www.ncbi.nlm.nih.gov/pubmed/22794299
2012 Neupane,S., Finlay,R.D., Alstrom,S., Goodwin,L., Kyrpides,N.C., Lucas,S., Lapidus,A., Bruce,D., Pitluck,S., Peters,L., Ovchinnikova,G., Chertkov,O., Han,J., Han,C., Tapia,R., Detter,J.C., Land,M., Hauser,L., Cheng,J.F., Ivanova,N., Pagani,I., Klenk,H.P., Woyke,T., Hogberg,N. ( 2012 ) Complete genome sequence of Serratia plymuthica strain AS12 Stand.Genomic Sci 6 (2) :165-173.

http://www.ncbi.nlm.nih.gov/pubmed/22768360
2012 Mavromatis,K., Chertkov,O., Lapidus,A., Nolan,M., Lucas,S., Tice,H., DelRio,T.G., Cheng,J.F., Han,C., Tapia,R., Bruce,D., Goodwin,L.A., Pitluck,S., Huntemann,M., Liolios,K., Pagani,I., Ivanova,N., Mikhailova,N., Pati,A., Chen,A., Palaniappan,K., Land,M., Brambilla,E.M., Rohde,M., Spring,S., Göker,M., Detter,J.C., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Kyrpides,N.C., Klenk,H.P., Woyke,T. ( 2012 ) Permanent draft genome sequence of the gliding predator Saprospira grandis strain Sa g1 (= HR1) Stand.Genomic Sci 6 (2) :210-219.

http://www.ncbi.nlm.nih.gov/pubmed/22768364
2012 Klenk,H.P., Lu,M., Lucas,S., Lapidus,A., Copeland,A., Pitluck,S., Goodwin,L.A., Han,C., Tapia,R., Brambilla,E.M., Pötter,G., Land,M., Ivanova,N., Rohde,M., Göker,M., Detter,J.C., Li,W.J., Kyrpides,N.C., Woyke,T. ( 2012 ) Genome sequence of the ocean sediment bacterium Saccharomonospora marina type strain (XMU15T) Stand.Genomic Sci 6 (2) :265-275.

http://www.ncbi.nlm.nih.gov/pubmed/22768369
2012 Klenk,H.P., Held,B., Lucas,S., Lapidus,A., Copeland,A., Hammon,N., Pitluck,S., Goodwin,L.A., Han,C., Tapia,R., Brambilla,E.M., Pötter,G., Land,M., Ivanova,N., Rohde,M., Göker,M., Detter,J.C., Kyrpides,N.C., Woyke,T. ( 2012 ) Genome sequence of the soil bacterium Saccharomonospora azurea type strain (NA-128T) Stand.Genomic Sci 6 (2) :220-229.

http://www.ncbi.nlm.nih.gov/pubmed/22768365
2012 Huntemann,M., Teshima,H., Lapidus,A., Nolan,M., Lucas,S., Hammon,N., Deshpande,S., Cheng,J.F., Tapia,R., Goodwin,L.A., Pitluck,S., Liolios,K., Pagani,I., Ivanova,N., Mavromatis,K., Mikhailova,N., Pati,A., Chen,A., Palaniappan,K., Land,M., Hauser,L., Pan,C., Brambilla,E.M., Rohde,M., Spring,S., Göker,M., Detter,J.C., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Kyrpides,N.C., Klenk,H.P., Woyke,T. ( 2012 ) Complete genome sequence of the facultatively anaerobic, appendaged bacterium Muricauda ruestringensis type strain (B1T) Stand.Genomic Sci 6 (2) :185-193.

http://www.ncbi.nlm.nih.gov/pubmed/22768362
2012 Hahnke,S., Tindall,B.J., Schumann,P., Sperling,M., Brinkhoff,T., Simon,M. ( 2012 ) Planktotalea frisia gen. nov., sp. nov., isolated from the southern North Sea Int J Syst Evol Microbiol 62 (Pt 7) :1619-1624.

http://www.ncbi.nlm.nih.gov/pubmed/21890723
2012 Göker,M., Saunders,E., Lapidus,A., Nolan,M., Lucas,S., Hammon,N., Deshpande,S., Cheng,J.F., Han,C., Tapia,R., Goodwin,L.A., Pitluck,S., Liolios,K., Mavromatis,K., Pagani,I., Ivanova,N., Mikhailova,N., Pati,A., Chen,A., Palaniappan,K., Land,M., Chang,Y.J., Jeffries,C.D., Brambilla,E.M., Rohde,M., Spring,S., Detter,J.C., Woyke,T., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Kyrpides,N.C., Klenk,H.P. ( 2012 ) Genome sequence of the moderately thermophilic, amino-acid-degrading and sulfur-reducing bacterium Thermovirga lienii type strain (Cas60314T) Stand.Genomic Sci 6 (2) :230-239.

http://www.ncbi.nlm.nih.gov/pubmed/22768366
2012 Copeland,A., Zhang,X., Misra,M., Lapidus,A., Nolan,M., Lucas,S., Deshpande,S., Cheng,J.F., Tapia,R., Goodwin,L.A., Pitluck,S., Liolios,K., Pagani,I., Ivanova,N., Mikhailova,N., Pati,A., Chen,A., Palaniappan,K., Land,M., Hauser,L., Pan,C., Jeffries,C.D., Detter,J.C., Brambilla,E.M., Rohde,M., Djao,O.D., Göker,M., Sikorski,J., Tindall,B.J., Woyke,T., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Kyrpides,N.C., Klenk,H.P., Mavromatis,K. ( 2012 ) Complete genome sequence of the aquatic bacterium Runella slithyformis type strain (LSU 4T) Stand.Genomic Sci 6 (2) :145-154.

http://www.ncbi.nlm.nih.gov/pubmed/22768358
2012 Copeland,A., Zeytun,A., Yassawong,M., Nolan,M., Lucas,S., Hammon,N., Deshpande,S., Cheng,J.F., Han,C., Tapia,R., Goodwin,L.A., Pitluck,S., Mavromatis,K., Liolios,K., Pagani,I., Ivanova,N., Mikhailova,N., Pati,A., Chen,A., Palaniappan,K., Land,M., Hauser,L., Jeffries,C.D., Brambilla,E.M., Rohde,M., Sikorski,J., Pukall,R., Göker,M., Detter,J.C., Woyke,T., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Kyrpides,N.C., Klenk,H.P., Lapidus,A. ( 2012 ) Complete genome sequence of the orange-red pigmented, radioresistant Deinococcus proteolyticus type strain (MRPT) Stand.Genomic Sci 6 (2) :240-250.

http://www.ncbi.nlm.nih.gov/pubmed/22768367
2012 Anderson,I., Saunders,E., Lapidus,A., Nolan,M., Lucas,S., Tice,H., DelRio,T.G., Cheng,J.F., Han,C., Tapia,R., Goodwin,L.A., Pitluck,S., Liolios,K., Mavromatis,K., Pagani,I., Ivanova,N., Mikhailova,N., Pati,A., Chen,A., Palaniappan,K., Land,M., Hauser,L., Jeffries,C.D., Chang,Y.J., Brambilla,E.M., Rohde,M., Spring,S., Göker,M., Detter,J.C., Woyke,T., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Kyrpides,N.C., Klenk,H.P. ( 2012 ) Complete genome sequence of the thermophilic sulfate-reducing ocean bacterium Thermodesulfatator indicus type strain (CIR29812T) Stand.Genomic Sci 6 (2) :155-164.

http://www.ncbi.nlm.nih.gov/pubmed/22768359
2012 Anderson,I., Held,B., Lapidus,A., Nolan,M., Lucas,S., Tice,H., DelRio,T.G., Cheng,J.F., Han,C., Tapia,R., Goodwin,L.A., Pitluck,S., Liolios,K., Mavromatis,K., Pagani,I., Ivanova,N., Mikhailova,N., Pati,A., Chen,A., Palaniappan,K., Land,M., Brambilla,E.M., Rohde,M., Spring,S., Göker,M., Detter,J.C., Woyke,T., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Klenk,H.P., Kyrpides,N.C. ( 2012 ) Genome sequence of the homoacetogenic bacterium Holophaga foetida type strain (TMBS4T) Stand.Genomic Sci 6 (2) :174-184.

http://www.ncbi.nlm.nih.gov/pubmed/22768361
2012 Abt,B., Han,C., Scheuner,C., Lu,M., Lapidus,A., Nolan,M., Lucas,S., Hammon,N., Deshpande,S., Cheng,J.F., Tapia,R., Goodwin,L.A., Pitluck,S., Liolios,K., Pagani,I., Ivanova,N., Mavromatis,K., Mikhailova,N., Huntemann,M., Pati,A., Chen,A., Palaniappan,K., Land,M., Hauser,L., Brambilla,E.M., Rohde,M., Spring,S., Gronow,S., Göker,M., Woyke,T., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Kyrpides,N.C., Klenk,H.P., Detter,J.C. ( 2012 ) Complete genome sequence of the termite hindgut bacterium Spirochaeta coccoides type strain (SPN1(T)), reclassification in the genus Sphaerochaeta as Sphaerochaeta coccoides comb. nov. and emendations of the family Spirochaetaceae and the genus Sphaerochaeta Stand.Genomic Sci 6 (2) :194-209.

http://www.ncbi.nlm.nih.gov/pubmed/22768363
2012 Horneck,G., Moeller,R., Cadet,J., Douki,T., Mancinelli,R.L., Nicholson,W.L., Panitz,C., Rabbow,E., Rettberg,P., Spry,A., Stackebrandt,E., Vaishampayan,P., Venkateswaran,K.J. ( 2012 ) Resistance of bacterial endospores to outer space for planetary protection purposes-experiment PROTECT of the EXPOSE-E mission Astrobiology 12 (5) :445-456.

http://www.ncbi.nlm.nih.gov/pubmed/22680691
2012 David,J., Garrity,G.M., Greuter,W., Hawksworth,D.L., Jahn,R., Kirk,P.M., McNeill,J., Michel,E., Knapp,S., Patterson,D.J., Tindall,B.J., Todd,J.A., van,T.J., Turland,N.J. ( 2012 ) Biological nomenclature terms for facilitating communication in the naming of organisms Zookeys 192 :67-72.

http://www.ncbi.nlm.nih.gov/pubmed/22639540
2012 Copeland,A., Gu,W., Yasawong,M., Lapidus,A., Lucas,S., Deshpande,S., Pagani,I., Tapia,R., Cheng,J.F., Goodwin,L.A., Pitluck,S., Liolios,K., Ivanova,N., Mavromatis,K., Mikhailova,N., Pati,A., Chen,A., Palaniappan,K., Land,M., Pan,C., Brambilla,E.M., Rohde,M., Tindall,B.J., Sikorski,J., Göker,M., Detter,J.C., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Kyrpides,N.C., Klenk,H.P., Woyke,T. ( 2012 ) Complete genome sequence of the aerobic, heterotroph Marinithermus hydrothermalis type strain (T1T) from a deep-sea hydrothermal vent chimney Stand.Genomic Sci 6 (1) :21-30.

http://www.ncbi.nlm.nih.gov/pubmed/22675595
2012 Anderson,I., Tindall,B.J., Rohde,M., Lucas,S., Han,J., Lapidus,A., Cheng,J.F., Goodwin,L., Pitluck,S., Peters,L., Pati,A., Mikhailova,N., Pagani,I., Teshima,H., Han,C., Tapia,R., Land,M., Woyke,T., Klenk,H.P., Kyrpides,N., Ivanova,N. ( 2012 ) Complete genome sequence of Halopiger xanaduensis type strain (SH-6T) Stand.Genomic Sci 6 (1) :31-42.

http://www.ncbi.nlm.nih.gov/pubmed/22675596
2012 Neupane,S., Hogberg,N., Alstrom,S., Lucas,S., Han,J., Lapidus,A., Cheng,J.F., Bruce,D., Goodwin,L., Pitluck,S., Peters,L., Ovchinnikova,G., Lu,M., Han,C., Detter,J.C., Tapia,R., Fiebig,A., Land,M., Hauser,L., Kyrpides,N.C., Ivanova,N., Pagani,I., Klenk,H.P., Woyke,T., Finlay,R.D. ( 2012 ) Complete genome sequence of the rapeseed plant-growth promoting Serratia plymuthica strain AS9 Stand.Genomic Sci 6 (1) :54-62.

http://www.ncbi.nlm.nih.gov/pubmed/22675598
2012 Meincke,L., Copeland,A., Lapidus,A., Lucas,S., Berry,K.W., DelRio,T.G., Hammon,N., Dalin,E., Tice,H., Pitluck,S., Richardson,P., Bruce,D., Goodwin,L., Han,C., Tapia,R., Detter,J.C., Schmutz,J., Brettin,T., Larimer,F., Land,M., Hauser,L., Kyrpides,N.C., Ivanova,N., Göker,M., Woyke,T., Wu,Q.L., Pöckl,M., Hahn,M.W., Klenk,H.P. ( 2012 ) Complete genome sequence of Polynucleobacter necessarius subsp. asymbioticus type strain (QLW-P1DMWA-1T) Stand.Genomic Sci 6 (1) :74-83.

http://www.ncbi.nlm.nih.gov/pubmed/22675600
2012 Han,C., Kotsyurbenko,O., Chertkov,O., Held,B., Lapidus,A., Nolan,M., Lucas,S., Hammon,N., Deshpande,S., Cheng,J.F., Tapia,R., Goodwin,L.A., Pitluck,S., Liolios,K., Pagani,I., Ivanova,N., Mavromatis,K., Mikhailova,N., Pati,A., Chen,A., Palaniappan,K., Land,M., Hauser,L., Chang,Y.J., Jeffries,C.D., Brambilla,E.M., Rohde,M., Spring,S., Sikorski,J., Göker,M., Woyke,T., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Kyrpides,N.C., Klenk,H.P., Detter,J.C. ( 2012 ) Complete genome sequence of the sulfur compounds oxidizing chemolithoautotroph Sulfuricurvum kujiense type strain (YK-1T) Stand.Genomic Sci 6 (1) :94-103.

http://www.ncbi.nlm.nih.gov/pubmed/22675602
2012 Anderson,I., Abt,B., Lykidis,A., Klenk,H.P., Kyrpides,N., Ivanova,N. ( 2012 ) Genomics of aerobic cellulose utilization systems in actinobacteria PLoS ONE 7 (6) :e39331.

http://www.ncbi.nlm.nih.gov/pubmed/22723998
2012 Vaas,L.A., Sikorski,J., Michael,V., Göker,M., Klenk,H.P. ( 2012 ) Visualization and curve-parameter estimation strategies for efficient exploration of phenotype microarray kinetics PLoS ONE 7 (4) :e34846.

http://www.ncbi.nlm.nih.gov/pubmed/22536335
2012 Yang,L.L., Ao,T., Wang,X.H., He,J., Klenk,H.P., Tang,S.K., Li,W.J. ( 2012 ) Proposal of Intrasporangium mesophilum sp. nov., and reclassification of Humihabitans oryzae Kageyama et al. 2007 as Intrasporangium oryzae comb. nov. Int J Syst Evol Microbiol 62 (Pt 5) :1037-1041.

http://www.ncbi.nlm.nih.gov/pubmed/21685254
2012 Kaur,I., Das,A.P., Acharya,M., Klenk,H.P., Sree,A., Mayilraj,S. ( 2012 ) Planococcus plakortidis sp. nov., isolated from the marine sponge Plakortis simplex (Schulze) Int J Syst Evol Microbiol 62 (Pt 4) :883-889.

http://www.ncbi.nlm.nih.gov/pubmed/21642486
2012 Endo,A., Futagawa-Endo,Y., Schumann,P., Pukall,R., Dicks,L.M. ( 2012 ) Bifidobacterium reuteri sp. nov., Bifidobacterium callitrichos sp. nov., Bifidobacterium saguini sp. nov., Bifidobacterium stellenboschense sp. nov. and Bifidobacterium biavatii sp. nov. isolated from faeces of common marmoset (Callithrix jacchus) and red-handed tamarin (Saguinus midas) Syst Appl Microbiol 35 (2) :92-97.

http://www.ncbi.nlm.nih.gov/pubmed/22225994