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Publications of the DSMZ

Here you will find a complete list of all scientific publications.

Publications
2015 Lepcha,R.T., Poddar,A., Schumann,P., Das,S.K. ( 2015 ) Comparative 16S rRNA signatures and multilocus sequence analysis for the genus Salinicola and description of Salinicola acroporae sp. nov., isolated from coral Acropora digitifera Antonie Van Leeuwenhoek 108 (1) :59-73.

http://www.ncbi.nlm.nih.gov/pubmed/25944083
2015 Laviad,S., Lapidus,A., Han,J., Haynes,M., Reddy,T.B.K., Huntemann,M., Pati,A., Ivanova,N., Mavromatis,K., Lang,E., Rohde,M., Markowitz,V., Woyke,T., Klenk,H.P., Kyrpides,N., Halpern,M. ( 2015 ) High quality draft genome sequence of Brachymonas chironomi AIMA4T (DSM 19884T) isolated from a Chironomus sp. egg mass Standards in genomic sciences 10 (1) :29.

http://www.standardsingenomics.com/content/10/1/29
2015 Laviad,S., Lapidus,A., Copeland,A., Reddy,T.B.K., Huntemann,M., Pati,A., Ivanova,N., Markowitz,V., Pukall,R., Klenk,H.P., Woyke,T., Kyrpides,N., Halpern,M. ( 2015 ) High quality draft genome sequence of Leucobacter chironomi strain MM2LBT (DSM 19883T) isolated from a Chironomus sp. egg mass Standards in genomic sciences 10 (1) :21.

http://www.standardsingenomics.com/content/10/1/21
2015 Lau,S.C., Riedel,T., Fiebig,A., Han,J., Huntemann,M., Petersen,J., Ivanova,N.N., Markowitz,V., Woyke,T., Goker,M., Kyrpides,N.C., Klenk,H.P., Qian,P.Y. ( 2015 ) Genome sequence of the pink-pigmented marine bacterium Loktanella hongkongensis type strain (UST950701-009P(T)), a representative of the Roseobacter group Stand Genomic Sci 10 :51.

http://www.ncbi.nlm.nih.gov/pubmed/26380639
2015 Lasker,B.A., Bell,M., Klenk,H.P., Schumann,P., Brown,J.M. ( 2015 ) Nocardia arizonensis sp. nov., obtained from human respiratory specimens Antonie Van Leeuwenhoek 108 (5) :1129-1137.

http://www.ncbi.nlm.nih.gov/pubmed/26427857
2015 Lang,E., Schumann,P., Tindall,B.J., Mohr,K.I., Sproer,C. ( 2015 ) Reclassification of Angiococcus disciformis, Cystobacter minus and Cystobacter violaceus as Archangium disciforme comb. nov., Archangium minus comb. nov. and Archangium violaceum comb. nov., unification of the families Archangiaceae and Cystobacteraceae, and emended descriptions of the families Myxococcaceae and Archangiaceae Int J Syst Evol Microbiol

http://www.ncbi.nlm.nih.gov/pubmed/26286530
2015 Lahoum,A., Bouras,N., Mathieu,F., Schumann,P., Spröer,C., Klenk,H.P., Sabaou,N. ( 2015 ) Actinomadura algeriensis sp. nov., an actinobacterium isolated from Saharan soil Antonie Van Leeuwenhoek

http://www.ncbi.nlm.nih.gov/pubmed/26542839
2015 Jeske,O., Schuler,M., Schumann,P., Schneider,A., Boedeker,C., Jogler,M., Bollschweiler,D., Rohde,M., Mayer,C., Engelhardt,H., Spring,S., Jogler,C. ( 2015 ) Planctomycetes do possess a peptidoglycan cell wall Nat Commun 6 :7116.

http://www.ncbi.nlm.nih.gov/pubmed/25964217
2015 Hofner,B., Boccuto,L., Goker,M. ( 2015 ) Controlling false discoveries in high-dimensional situations: boosting with stability selection BMC Bioinformatics 16 (1) :144.

http://www.ncbi.nlm.nih.gov/pubmed/25943565
2015 Hezbri,K., Ghodhbane-Gtari,F., Montero-Calasanz,M.D., Sghaier,H., Rohde,M., Schumann,P., Klenk,H.P., Gtari,M. ( 2015 ) Geodermatophilus sabuli sp. nov., a gamma-radiation-resistant actinobacterium isolated from limestone in Sahara desert Int J Syst Evol Microbiol

http://www.ncbi.nlm.nih.gov/pubmed/26297235
2015 Hezbri,K., Ghodhbane-Gtari,F., Del,C.M.-C., Sghaier,H., Rohde,M., Sproer,C., Schumann,P., Klenk,H.P., Gtari,M. ( 2015 ) Geodermatophilus aquaeductus sp. nov., isolated from the ruins of Hadrian's aqueduct Antonie Van Leeuwenhoek 108 (1) :41-50.

http://www.ncbi.nlm.nih.gov/pubmed/26025303
2015 Hezbri,K., Ghodhbane-Gtari,F., Del,C.M.-C., Sghaier,H., Rohde,M., Schumann,P., Klenk,H.P., Gtari,M. ( 2015 ) Description of Geodermatophilus bullaregiensis sp. nov Antonie Van Leeuwenhoek 108 (2) :415-425.

http://www.ncbi.nlm.nih.gov/pubmed/26025305
2015 Hahnke,R.L., Stackebrandt,E., Meier-Kolthoff,J.P., Tindall,B.J., Huang,S., Rohde,M., Lapidus,A., Han,J., Trong,S., Haynes,M., Reddy,T.B., Huntemann,M., Pati,A., Ivanova,N.N., Mavromatis,K., Markowitz,V., Woyke,T., Goker,M., Kyrpides,N.C., Klenk,H.P. ( 2015 ) High quality draft genome sequence of Flavobacterium rivuli type strain WB 3.3-2(T) (DSM 21788(T)), a valuable source of polysaccharide decomposing enzymes Stand Genomic Sci 10 :46.

http://www.ncbi.nlm.nih.gov/pubmed/26380634
2015 Gomez-Consarnau,L., Gonzalez,J.M., Riedel,T., Jaenicke,S., Wagner-Dobler,I., Sanudo-Wilhelmy,S.A., Fuhrman,J.A. ( 2015 ) Proteorhodopsin light-enhanced growth linked to vitamin-B acquisition in marine Flavobacteria ISME J

http://www.ncbi.nlm.nih.gov/pubmed/26574687
2015 Gao,X.Y., Zhi,X.Y., Li,H.W., Zhou,Y., Lapidus,A., Han,J., Haynes,M., Lobos,E., Huntemann,M., Pati,A., Ivanova,N.N., Mavromatis,K., Tindall,B.J., Markowitz,V., Woyke,T., Klenk,H.P., Kyrpides,N.C., Li,W.J. ( 2015 ) Draft genome sequence of Halomonas lutea strain YIM 91125(T) (DSM 23508(T)) isolated from the alkaline Lake Ebinur in Northwest China Stand Genomic Sci 10 :1.

http://www.ncbi.nlm.nih.gov/pubmed/25678942
2015 Frank,O., Michael,V., Pauker,O., Boedeker,C., Jogler,C., Rohde,M., Petersen,J. ( 2015 ) Plasmid curing and the loss of grip - The 65-kb replicon of Phaeobacter inhibens DSM 17395 is required for biofilm formation, motility and the colonization of marine algae Syst Appl Microbiol 38 (2) :120-127.

http://www.ncbi.nlm.nih.gov/pubmed/25595869
2015 Frank,O., Goker,M., Pradella,S., Petersen,J. ( 2015 ) Ocean's Twelve: flagellar and biofilm chromids in the multipartite genome of Marinovum algicola DG898 exemplify functional compartmentalization Environ Microbiol 17 (10) :4019-4034.

http://www.ncbi.nlm.nih.gov/pubmed/26079637
2015 Foesel,B.U., Mayer,S., Luckner,M., Wanner,G., Rohde,M., Overmann,J. ( 2015 ) Occallatibacter riparius gen. nov., sp. nov. and O. savannae sp. nov. two novel acidobacterial species isolated from Namibian soils and emended description of the family Acidobacteriaceae Int J Syst Evol Microbiol

http://www.ncbi.nlm.nih.gov/pubmed/26486590
2015 Foesel,B.U., Geppert,A., Rohde,M., Overmann,J. ( 2015 ) Parviterribacter kavangonensis and Parviterribacter multiflagellatus a novel genus and two novel species within the order Solirubrobacterales and emended description of the classes Thermoleophilia and Rubrobacteria and its orders and families Int J Syst Evol Microbiol

http://www.ncbi.nlm.nih.gov/pubmed/26582010
2015 Finger,C., Gamer,M., Klunkelfuss,S., Bunk,B., Biedendieck,R. ( 2015 ) Impact of rare codons and the functional coproduction of rate-limiting tRNAs on recombinant protein production in Bacillus megaterium Appl Microbiol Biotechnol 99 (21) :8999-9010.

http://www.ncbi.nlm.nih.gov/pubmed/26138251
2015 Eder,W., Peplies,J., Wanner,G., Fruhling,A., Verbarg,S. ( 2015 ) Hydrobacter penzbergensis gen. nov., sp. nov., isolated from purified water Int J Syst Evol Microbiol 65 (Pt 3) :920-926.

http://www.ncbi.nlm.nih.gov/pubmed/25563914
2015 Dubinina,G., Grabovich,M., Leshcheva,N., Gronow,S., Gavrish,E., Akimov,V. ( 2015 ) Spirochaeta sinaica sp. nov., a halophilic spirochaete isolated from a cyanobacterial mat Int J Syst Evol Microbiol 65 (11) :3872-3877.

http://www.ncbi.nlm.nih.gov/pubmed/26243077
2015 Doijad,S., Imirzalioglu,C., Yao,Y., Pati,N.B., Falgenhauer,L., Hain,T., Foesel,B.U., Abt,B., Overmann,J., Mirambo,M.M., Mshana,S.E., Chakraborty,T. ( 2015 ) Enterobacter bugandensis sp. nov., from a neonatal unit in Tanzania Int J Syst Evol Microbiol

http://www.ncbi.nlm.nih.gov/pubmed/26637818
2015 Derelle,R., Torruella,G., Klimes,V., Brinkmann,H., Kim,E., Vlcek,C., Lang,B.F., Elias,M. ( 2015 ) Bacterial proteins pinpoint a single eukaryotic root Proc Natl Acad Sci U S A 112 (7) :E693-E699.

http://www.ncbi.nlm.nih.gov/pubmed/25646484
2015 Debarbieux,L., Rohde,C., Pirnay,J.P., De,V.D., Verbeken,G. ( 2015 ) A bacteriophage journey at the European Medicines Agency FEMS Microbiol Lett

http://www.ncbi.nlm.nih.gov/pubmed/26656541
2015 Csotonyi,J.T., Maltman,C., Swiderski,J., Stackebrandt,E., Yurkov,V. ( 2015 ) Extremely 'vanadiphilic' multiply metal-resistant and halophilic aerobic anoxygenic phototrophs, strains EG13 and EG8, from hypersaline springs in Canada Extremophiles 19 (1) :127-134.

http://www.ncbi.nlm.nih.gov/pubmed/25209747
2015 Courties,A., Riedel,T., Rapaport,A., Lebaron,P., Suzuki,M.T. ( 2015 ) Light-driven increase in carbon yield is linked to maintenance in the proteorhodopsin-containing Photobacterium angustum S14 Front Microbiol 6 :688.

http://www.ncbi.nlm.nih.gov/pubmed/26217320
2015 Cota,I., Bunk,B., Sproer,C., Overmann,J., Konig,C., Casadesus,J. ( 2015 ) OxyR-dependent formation of DNA methylation patterns in OpvABOFF and OpvABON cell lineages of Salmonella enterica Nucleic Acids Res

http://www.ncbi.nlm.nih.gov/pubmed/26687718
2015 Claussen,M., Lingner,T., Pommerenke,C., Opitz,L., Salinas,G., Pieler,T. ( 2015 ) Global analysis of asymmetric RNA enrichment in oocytes reveals low conservation between closely related Xenopus species Mol Biol Cell 26 (21) :3777-3787.

http://www.ncbi.nlm.nih.gov/pubmed/26337391
2015 Choi,D.H., Ahn,C., Jang,G.I., Lapidus,A., Han,J., Reddy,T.B., Huntemann,M., Pati,A., Ivanova,N., Markowitz,V., Rohde,M., Tindall,B., Goker,M., Woyke,T., Klenk,H.P., Kyrpides,N.C., Cho,B.C. ( 2015 ) High-quality draft genome sequence of Gracilimonas tropica CL-CB462(T) (DSM 19535(T)), isolated from a Synechococcus culture Stand Genomic Sci 10 :98.

http://www.ncbi.nlm.nih.gov/pubmed/26566423
2015 Bouras,N., Meklat,A., Zitouni,A., Mathieu,F., Schumann,P., Sproer,C., Sabaou,N., Klenk,H.P. ( 2015 ) Nocardiopsis algeriensis sp. nov., an alkalitolerant actinomycete isolated from Saharan soil Antonie Van Leeuwenhoek 107 (2) :313-320.

http://www.ncbi.nlm.nih.gov/pubmed/25380720
2015 Boudjelal,F., Zitouni,A., Bouras,N., Schumann,P., Sproer,C., Sabaou,N., Klenk,H.P. ( 2015 ) Actinoalloteichus hoggarensis sp. nov., an actinomycete isolated from Saharan soil Int J Syst Evol Microbiol 65 (Pt 6) :2006-2010.

http://www.ncbi.nlm.nih.gov/pubmed/25825244
2015 Boubetra,D., Zitouni,A., Bouras,N., Schumann,P., Sproer,C., Klenk,H.P., Sabaou,N. ( 2015 ) Saccharothrix tamanrassetensis sp. nov., an actinomycete isolated from Saharan soil Int J Syst Evol Microbiol 65 (Pt 4) :1316-1320.

http://www.ncbi.nlm.nih.gov/pubmed/25667388
2015 Boubetra,D., Bouras,N., Zitouni,A., Schumann,P., Sproer,C., Sabaou,N., Klenk,H.P. ( 2015 ) Streptosporangium algeriense sp. nov., an actinobacterium isolated from desert soil Int J Syst Evol Microbiol

http://www.ncbi.nlm.nih.gov/pubmed/26647039
2015 Billerbeck,S., Orchard,J., Tindall,B.J., Giebel,H.A., Brinkhoff,T., Simon,M. ( 2015 ) Description of Octadecabacter temperatus sp. nov., isolated from the southern North Sea, emended descriptions of the genus Octadecabacter and its species and reclassification of Octadecabacter jejudonensisPark and Yoon 2014 as Pseudooctadecabacter jejudonensis gen. nov., comb. nov Int J Syst Evol Microbiol 65 (6) :1967-1974.

http://www.ncbi.nlm.nih.gov/pubmed/25816810
2015 BenHania,W., Joseph,M., Schumann,P., Bunk,B., Fiebig,A., Sproer,C., Klenk,H.P., Fardeau,M.L., Spring,S. ( 2015 ) Complete genome sequence and description of Salinispira pacifica gen. nov., sp. nov., a novel spirochaete isolated form a hypersaline microbial mat Standards in genomic sciences 10 (1) :7.

http://www.standardsingenomics.com/content/10/1/7
2015 Beims,H., Wittmann,J., Bunk,B., Sproer,C., Rohde,C., Gunther,G., Rohde,M., vonder,O.W., Steinert,M. ( 2015 ) Paenibacillus larvae-Directed Bacteriophage HB10c2 and Its Application in American Foulbrood-Affected Honey Bee Larvae Appl Environ Microbiol 81 (16) :5411-5419.

http://www.ncbi.nlm.nih.gov/pubmed/26048941
2015 Beims,H., Wittmann,J., Bunk,B., Sproer,C., Rohde,C., Gunther,G., Rohde,M., vonder,O.W., Steinert,M. ( 2015 ) Characterization of Paenibacillus larvae-directed bacteriophage HB10c2 and evaluation of its application in honey bee larvae suffering from American Foulbrood Appl Environ Microbiol

http://www.ncbi.nlm.nih.gov/pubmed/26048941
2015 Behrendt,U., Augustin,J., Sproer,C., Gelbrecht,J., Schumann,P., Ulrich,A. ( 2015 ) Taxonomic characterisation of Proteus terrae sp. nov., a N2O-producing, nitrate-ammonifying soil bacterium Antonie Van Leeuwenhoek 108 (6) :1457-1468.

http://www.ncbi.nlm.nih.gov/pubmed/26437638
2015 Aouiche,A., Bouras,N., Mokrane,S., Zitouni,A., Schumann,P., Sproer,C., Sabaou,N., Klenk,H.P. ( 2015 ) Actinokineospora mzabensis sp. nov., a novel actinomycete isolated from Saharan soil Antonie Van Leeuwenhoek 107 (1) :291-296.

http://www.ncbi.nlm.nih.gov/pubmed/25378048
2015 Amoozegar,M.A., Makhdoumi-Kakhki,A., Mehrshad,M., Rasooli,M., Fazeli,S.A., Sproer,C., Ventosa,A. ( 2015 ) Halovivax cerinus sp. nov., an extremely halophilic archaeon from a hypersaline lake Int J Syst Evol Microbiol 65 (Pt 1) :65-70.

http://www.ncbi.nlm.nih.gov/pubmed/25269847
2015 Akhwale,J.K., Goker,M., Rohde,M., Sproer,C., Schumann,P., Klenk,H.P., Boga,H.I. ( 2015 ) Streptomyces alkaliphilus sp. nov., isolated from sediments of Lake Elmenteita in the Kenyan Rift Valley Antonie Van Leeuwenhoek 107 (5) :1249-1259.

http://www.ncbi.nlm.nih.gov/pubmed/25761860
2015 Akhwale,J.K., Goker,M., Rohde,M., Schumann,P., Klenk,H.P., Boga,H.I. ( 2015 ) Belliella kenyensis sp. nov., isolated from an alkaline lake Int J Syst Evol Microbiol 65 (Pt 2) :457-462.

http://www.ncbi.nlm.nih.gov/pubmed/25385994
2015 Addou,N.A., Schumann,P., Sproer,C., Ben,H.W., Hacene,H., Fauque,G., Cayol,J.L., Fardeau,M.L. ( 2015 ) Melghiribacillus thermohalophilus gen. nov., sp. nov., a novel filamentous, endospore-forming, thermophilic and halophilic bacterium Int J Syst Evol Microbiol 65 (Pt 4) :1172-1179.

http://www.ncbi.nlm.nih.gov/pubmed/25604343
2014 Ravindran,B.M., Winter,S., Makeshkumar,T. ( 2014 ) Influence of Age of Explants and Genotype on Somatic Embryogenesis in African and Indian Cassava Cultivars Journal of Root Crops 40 (2) :21-27.

2014 Menzel,W., Thottappilly,G., Winter,S. ( 2014 ) Characterization of an isometric virus isolated from yam (Dioscorea rotundata) in Nigeria suggests that it belongs to a new species in the genus Aureusvirus Arch Virol 159 (3) :603-6.

http://www.ncbi.nlm.nih.gov/pubmed/24085328
2014 Legg,J., Somado,E.A., Barker,I., Beach,L., Ceballos,H., Cuellar,W., Elkhoury,W., Gerling,D., Helsen,J., Hershey,C., Jarvis,A., Kulakow,P., Kumar,L., Lorenzen,J., Lynam,J., McMahon,M., Maruthi,G., Miano,D., Mtunda,K., Natwuruhunga,P., Okogbenin,E., Pezo,P., Terry,E., ThieleG., Thresh,M., Wadsworth,J., Walsh,S., Winter,S., Tohme,J., Fauquet,C. ( 2014 ) A global alliance declaring war on cassava viruses in Africa Food Security 6 :231-248.

2014 Kollenberg,M., Winter,S., Götz,M. ( 2014 ) Quantification and localization of Watermelon chlorotic stunt virus and Tomato yellow leaf curl virus (Geminiviridae) in populations of Bemisia tabaci (Hemiptera, Aleyrodidae) with differential virus transmission characteristics. PLOSone

2014 Gilioli,G., Pasquali,S., Parisi,S., Winter,S. ( 2014 ) Modelling the potential distribution of Bemisia tabaci in Europe in light of the climatic change scenario Pest Manag Sci

2014 Boonham,N., Kreuze,J., Winter,S., vanderVlugt,R., Bergervoet,J., Tomlinson,J., Mumford,R. ( 2014 ) Methods in virus diagnostics: From ELISA to next generation sequencing Virus Res

http://www.ncbi.nlm.nih.gov/pubmed/24361981
2014 Bananej,K., Kianfar,N., Winter,S., Menzel,W. ( 2014 ) The status of Cucumber vein yellowing virus in Iran Phytopathologia Mediterranea 53 (2) :269-276.

2014 Zhou,Y., Li,R., Gao,X.Y., Lapidus,A., Han,J., Haynes,M., Lobos,E., Huntemann,M., Pati,A., Ivanova,N.N., Rohde,M., Mavromatis,K., Tindall,B.J., Markowitz,V., Woyke,T., Klenk,H.P., Kyrpides,N.C., Li,W.J. ( 2014 ) High quality draft genome sequence of the slightly halophilic bacterium Halomonas zhanjiangensis type strain JSM 078169(T) (DSM 21076(T)) from a sea urchin in southern China Standards in genomic sciences 9 (3) :1020-1030.

http://www.ncbi.nlm.nih.gov/pubmed/25197480

2014 Bananej,K., Kianfar,N., Vahdat,A., Winter,S., Menzel,W. ( 2014 ) Molecular and Serological Identification of Cucumber leaf spot virus in Iran Journal of Phytopathology 162 :205-208.

http://dx.doi.org/10.1111/jph.12178
2014 Yu,T.T., Yin,Y.R., Zhang,Y.G., Yao,J.C., Klenk,H.P., Wang,H.F., Ming,H., Zhou,E.M., Li,W.J. ( 2014 ) Meiothermus terrae sp. nov., isolated from a geothermally heated soil sample International journal of systematic and evolutionary microbiology 64 (Pt 3) :794-798.

http://www.ncbi.nlm.nih.gov/pubmed/24215822

2014 Abraham,A.D., Menzel,W., Bekele,B., Winter,S. ( 2014 ) A novel combination of a new umbravirus, a new satellite RNA and potato leafroll virus causes tobacco bushy top disease in Ethiopia Arch Virol 159 :3395-3399.

http://www.ncbi.nlm.nih.gov/pubmed/25119677
2014 Wittmann,J., Dreiseikelmann,B., Rohde,M., Meier-Kolthoff,J.P., Bunk,B., Rohde,C. ( 2014 ) First genome sequences of Achromobacter phages reveal new members of the N4 family Virology journal 11 :14.

http://www.ncbi.nlm.nih.gov/pubmed/24468270

2014 Wittmann,J., Dreiseikelmann,B., Rohde,C., Rohde,M., Sikorski,J. ( 2014 ) Isolation and Characterization of Numerous Novel Phages Targeting Diverse Strains of the Ubiquitous and Opportunistic Pathogen Achromobacter xylosoxidans PLoS One 9 (1) :e86935.

http://www.ncbi.nlm.nih.gov/pubmed/24466294

2014 Wittmann,J., Dreiseikelmann,B., Rohde,C., Rohde,M., Sikorski,J. ( 2014 ) Isolation and Characterization of Numerous Novel Phages Targeting Diverse Strains of the Ubiquitous and Opportunistic Pathogen Achromobacter xylosoxidans PLoS One 9 (1) :e86935.

http://www.ncbi.nlm.nih.gov/pubmed/24466294

2014 Wink,J., Schumann,P., Spöer,C., Eisenbarth,K., Glaeser,S.P., Martin,K., Kämpfer,P. ( 2014 ) Emended description of Actinoplanes friuliensis and description of Actinoplanes nipponensis sp. nov., antibiotic-producing species of the genus Actinoplanes International journal of systematic and evolutionary microbiology 64 (Pt 2) :599-606.

http://www.ncbi.nlm.nih.gov/pubmed/24158947

2014 Visser,M., Parshina,S.N., Alves,J.I., Sousa,D.Z., Pereira,I.A., Muyzer,G., Kuever,J., Lebedinsky,A.V., Koehorst,J.J., Worm,P., Plugge,C.M., Schaap,P.J., Goodwin,L.A., Lapidus,A., Kyrpides,N.C., Detter,J.C., Woyke,T., Chain,P., Davenport,K.W., Spring,S., Rohde,M., Klenk,H.P., Stams,A.J. ( 2014 ) Genome analyses of the carboxydotrophic sulfate-reducers Desulfotomaculum nigrificans and Desulfotomaculum carboxydivorans and reclassification of Desulfotomaculum caboxydivorans as a later synonym of Desulfotomaculum nigrificans Standards in genomic sciences 9 (3) :655-675.

http://www.ncbi.nlm.nih.gov/pubmed/25197452

2014 Verkley,G.J., Dukik,K., Renfurm,R., Göker,M., Stielow,J.B. ( 2014 ) Novel genera and species of coniothyrium-like fungi in Montagnulaceae (Ascomycota) Persoonia 32 :25-51.

http://www.ncbi.nlm.nih.gov/pubmed/25264382

2014 Toth,E.M., Vengring,A., Homonnay,Z.G., Keki,Z., Spröer,C., Borsodi,A.K., Marialigeti,K., Schumann,P. ( 2014 ) Phreatobacter oligotrophus gen. nov., sp. nov., an alphaproteobacterium isolated from ultrapure water of the water purification system of a power plant International journal of systematic and evolutionary microbiology 64 (Pt 3) :839-845.

http://www.ncbi.nlm.nih.gov/pubmed/24277862

2014 Tindall,B.J. ( 2014 ) A note on the genus name Rhodococcus Zopf 1891 and its homonyms International journal of systematic and evolutionary microbiology 64 (Pt 3) :1062-1064.

http://www.ncbi.nlm.nih.gov/pubmed/24623821

2014 Tindall,B.J. ( 2014 ) What ever happened to Thermomicrobium fosteri Phillips and Perry 1976? International journal of systematic and evolutionary microbiology 64 (Pt 3) :1065-1067.

http://www.ncbi.nlm.nih.gov/pubmed/24623822

2014 Tindall,B.J. ( 2014 ) On the status of the species name Streptomyces ruanii Kumar and Goodfellow 2008 International journal of systematic and evolutionary microbiology 64 (Pt 3) :1068-1070.

http://www.ncbi.nlm.nih.gov/pubmed/24623823

2014 Tindall,B.J. ( 2014 ) The correct name of the taxon that contains the type strain of Rhodococcus equi International journal of systematic and evolutionary microbiology 64 (Pt 1) :302-308.

http://www.ncbi.nlm.nih.gov/pubmed/24408951

2014 Tindall,B.J. ( 2014 ) The family name Solimonadaceae Losey et al. 2013 is illegitimate, proposals to create the names 'Sinobacter soli' comb. nov. and 'Sinobacter variicoloris' contravene the Code, the family name Xanthomonadaceae Saddler and Bradbury 2005 and the order name Xanthomonadales Saddler and Bradbury 2005 are illegitimate and notes on the application of the family names Solibacteraceae Zhou et al. 2008, Nevskiaceae Henrici and Johnson 1935 (Approved Lists 1980) and Lysobacteraceae Christensen and Cook 1978 (Approved Lists 1980) and order name Lysobacteriales Christensen and Cook 1978 (Approved Lists 1980) with respect to the classification of the corresponding type genera Solibacter Zhou et al. 2008, Nevskia Famintzin 1892 (Approved Lists 1980) and Lysobacter Christensen and Cook 1978 (Approved Lists 1980) and importance of accurately expressing the link between a taxonomic name, its authors and the corresponding description/circumscription/emendation International journal of systematic and evolutionary microbiology 64 (Pt 1) :293-297.

http://www.ncbi.nlm.nih.gov/pubmed/24408949

2014 Stackebrandt,E., Smith,D., Casaregola,S., Varese,G.C., Verkleij,G., Lima,N., Bridge,P. ( 2014 ) Deposit of microbial strains in public service collections as part of the publication process to underpin good practice in science SpringerPlus 3 :208.

http://www.ncbi.nlm.nih.gov/pubmed/24826375

2014 Spring,S. ( 2014 ) Function and Evolution of the Sox Multienzyme Complex in the Marine Gammaproteobacterium Congregibacter litoralis ISRN microbiology 2014 :597418.

http://www.ncbi.nlm.nih.gov/pubmed/25006520

2014 Smith,D., McCluskey,K., Stackebrandt,E. ( 2014 ) Investment into the future of microbial resources: culture collection funding models and BRC business plans for biological resource centres SpringerPlus 3 :81.

http://www.ncbi.nlm.nih.gov/pubmed/24570852

2014 SinningheDamste,J.S., Rijpstra,W.I., Hopmans,E.C., Foesel,B.U., Wüst,P.K., Overmann,J., Tank,M., Bryant,D.A., Dunfield,P.F., Houghton,K., Stott,M.B. ( 2014 ) Ether- and ester-bound iso-diabolic acid and other lipids in members of acidobacteria subdivision 4 Applied and environmental microbiology 80 (17) :5207-5218.

http://www.ncbi.nlm.nih.gov/pubmed/24928878

2014 Shahinpei,A., Amoozegar,M.A., Sepahy,A.A., Schumann,P., Ventosa,A. ( 2014 ) Cyclobacterium halophilum sp. nov., a marine bacterium isolated from a coastal-marine wetland International journal of systematic and evolutionary microbiology 64 (Pt 3) :1000-1005.

http://www.ncbi.nlm.nih.gov/pubmed/24425822

2014 Selbmann,L., Turchetti,B., Yurkov,A., Cecchini,C., Zucconi,L., Isola,D., Buzzini,P., Onofri,S. ( 2014 ) Description of Taphrina antarctica f.a. sp. nov., a new anamorphic ascomycetous yeast species associated with Antarctic endolithic microbial communities and transfer of four Lalaria species in the genus Taphrina Extremophiles : life under extreme conditions 18 (4) :707-721.

http://www.ncbi.nlm.nih.gov/pubmed/24893860

2014 Sahin,N., Veyisoglu,A., Tatar,D., Spröer,C., Cetin,D., Guven,K., Klenk,H.P. ( 2014 ) Pseudonocardia cypriaca sp. nov., Pseudonocardia salamisensis sp. nov., Pseudonocardia hierapolitana sp. nov. and Pseudonocardia kujensis sp. nov., isolated from soil International journal of systematic and evolutionary microbiology 64 (Pt 5) :1703-1711.

http://www.ncbi.nlm.nih.gov/pubmed/24523445

2014 Riedel,T., Spring,S., Fiebig,A., Petersen,J., Göker,M., Klenk,H.P. ( 2014 ) Genome sequence of the pink to light reddish-pigmented Rubellimicrobium mesophilum type strain (DSM 19309(T)), a representative of the Roseobacter group isolated from soil, and emended description of the species Standards in genomic sciences 9 (3) :902-913.

http://www.ncbi.nlm.nih.gov/pubmed/25197472

2014 Riedel,T., Fiebig,A., Han,J., Huntemann,M., Spring,S., Petersen,J., Ivanova,N.N., Markowitz,V., Woyke,T., Göker,M., Kyrpides,N.C., Klenk,H.P. ( 2014 ) Genome sequence of the Wenxinia marina type strain (DSM 24838(T)), a representative of the Roseobacter group isolated from oilfield sediments Standards in genomic sciences 9 (3) :855-865.

http://www.ncbi.nlm.nih.gov/pubmed/25197468

2014 Riedel,T., Fiebig,A., Göker,M., Klenk,H.P. ( 2014 ) Complete genome sequence of the bacteriochlorophyll a-containing Roseibacterium elongatum type strain (DSM 19469(T)), a representative of the Roseobacter group isolated from Australian coast sand Standards in genomic sciences 9 (3) :840-854.

http://www.ncbi.nlm.nih.gov/pubmed/25197467

2014 Rameshkumar,N., Krishnan,R., Lang,E., Matsumura,Y., Sawabe,T., Sawabe,T. ( 2014 ) Zunongwangia mangrovi sp. nov., isolated from mangrove (Avicennia marina) rhizosphere, and emended description of the genus Zunongwangia International journal of systematic and evolutionary microbiology 64 (Pt 2) :545-550.

http://www.ncbi.nlm.nih.gov/pubmed/24126636

2014 Ntougias,S., Lapidus,A., Han,J., Mavromatis,K., Pati,A., Chen,A., Klenk,H.P., Woyke,T., Fasseas,C., Kyrpides,N.C., Zervakis,G.I. ( 2014 ) High quality draft genome sequence of Olivibacter sitiensis type strain (AW-6(T)), a diphenol degrader with genes involved in the catechol pathway Standards in genomic sciences 9 (3) :783-793.

http://www.ncbi.nlm.nih.gov/pubmed/25197463

2014 Nikou,M.M., Ramezani,M., Amoozegar,M.A., Fazeli,S.A., Schumann,P., Spröer,C., Sanchez-Porro,C., Ventosa,A. ( 2014 ) Alloactinosynnema iranicum sp. nov., a rare actinomycete isolated from a hypersaline wetland, and emended description of the genus Alloactinosynnema International journal of systematic and evolutionary microbiology 64 (Pt 4) :1173-1179.

http://www.ncbi.nlm.nih.gov/pubmed/24408526

2014 Meklat,A., Bouras,N., Zitouni,A., Sabaou,N., Mathieu,F., Schumann,P., Spröer,C., Klenk,H.P. ( 2014 ) Saccharopolyspora ghardaiensis sp. nov., an extremely halophilic actinomycete isolated from Algerian Saharan soil The Journal of antibiotics 67 (4) :299-303.

http://www.ncbi.nlm.nih.gov/pubmed/24346634

2014 Meissner,T., Eckelt,E., Basler,T., Meens,J., Heinzmann,J., Suwandi,A., Oelemann,W.M., Trenkamp,S., Holst,O., Weiss,S., Bunk,B., Spröer,C., Gerlach,G.F., Goethe,R. ( 2014 ) The Mycobacterium avium ssp. paratuberculosis specific mptD gene is required for maintenance of the metabolic homeostasis necessary for full virulence in mouse infections Frontiers in cellular and infection microbiology 4 :110.

http://www.ncbi.nlm.nih.gov/pubmed/25177550

2014 Meissner,T., Eckelt,E., Basler,T., Meens,J., Heinzmann,J., Suwandi,A., Oelemann,W.M., Trenkamp,S., Holst,O., Weiss,S., Bunk,B., Spröer,C., Gerlach,G.F., Goethe,R. ( 2014 ) The Mycobacterium avium ssp. paratuberculosis specific mptD gene is required for maintenance of the metabolic homeostasis necessary for full virulence in mouse infections Frontiers in cellular and infection microbiology 4 :110.

http://www.ncbi.nlm.nih.gov/pubmed/25177550

2014 Meier-Kolthoff,J.P., Klenk,H.P., Göker,M. ( 2014 ) Taxonomic use of DNA G+C content and DNA-DNA hybridization in the genomic age International journal of systematic and evolutionary microbiology 64 (Pt 2) :352-356.

http://www.ncbi.nlm.nih.gov/pubmed/24505073

2014 Lentini,V., Gugliandolo,C., Bunk,B., Overmann,J., Maugeri,T.L. ( 2014 ) Diversity of prokaryotic community at a shallow marine hydrothermal site elucidated by illumina sequencing technology Current microbiology 69 (4) :457-466.

http://www.ncbi.nlm.nih.gov/pubmed/24849732

2014 Lasker,B.A., Bell,M., Klenk,H.P., Spröer,C., Schumann,C., Schumann,P., Brown,J.M. ( 2014 ) Nocardia vulneris sp. nov., isolated from wounds of human patients in North America Antonie Van Leeuwenhoek 106 (3) :543-553.

http://www.ncbi.nlm.nih.gov/pubmed/25015412

2014 Lasker,B.A., Bell,M., Klenk,H.P., Spröer,C., Schumann,C., Schumann,P., Brown,J.M. ( 2014 ) Nocardia vulneris sp. nov., isolated from wounds of human patients in North America Antonie Van Leeuwenhoek 106 (3) :543-553.

http://www.ncbi.nlm.nih.gov/pubmed/25015412

2014 Kyrpides,N.C., Woyke,T., Eisen,J.A., Garrity,G., Lilburn,T.G., Beck,B.J., Whitman,W.B., Hugenholtz,P., Klenk,H.P. ( 2014 ) Genomic Encyclopedia of Type Strains, Phase I: The one thousand microbial genomes (KMG-I) project Standards in genomic sciences 9 (3) :1278-1284.

http://www.ncbi.nlm.nih.gov/pubmed/25197443

2014 Kyrpides,N.C., Hugenholtz,P., Eisen,J.A., Woyke,T., Göker,M., Parker,C.T., Amann,R., Beck,B.J., Chain,P.S., Chun,J., Colwell,R.R., Danchin,A., Dawyndt,P., Dedeurwaerdere,T., DeLong,E.F., Detter,J.C., De,V.P., Donohue,T.J., Dong,X.Z., Ehrlich,D.S., Fraser,C., Gibbs,R., Gilbert,J., Gilna,P., Glockner,F.O., Jansson,J.K., Keasling,J.D., Knight,R., Labeda,D., Lapidus,A., Lee,J.S., Li,W.J., Ma,J., Markowitz,V., Moore,E.R., Morrison,M., Meyer,F., Nelson,K.E., Ohkuma,M., Ouzounis,C.A., Pace,N., Parkhill,J., Qin,N., Rossello-Mora,R., Sikorski,J., Smith,D., Sogin,M., Stevens,R., Stingl,U., Suzuki,K., Taylor,D., Tiedje,J.M., Tindall,B., Wagner,M., Weinstock,G., Weissenbach,J., White,O., Wang,J., Zhang,L., Zhou,Y.G., Field,D., Whitman,W.B., Garrity,G.M., Klenk,H.P. ( 2014 ) Genomic encyclopedia of bacteria and archaea: sequencing a myriad of type strains PLoS biology 12 (8) :e1001920.

http://www.ncbi.nlm.nih.gov/pubmed/25093819

2014 Kuever,J., Visser,M., Loeffler,C., Boll,M., Worm,P., Sousa,D.Z., Plugge,C.M., Schaap,P.J., Muyzer,G., Pereira,I.A., Parshina,S.N., Goodwin,L.A., Kyrpides,N.C., Detter,J., Woyke,T., Chain,P., Davenport,K.W., Rohde,M., Spring,S., Klenk,H.P., Stams,A.J. ( 2014 ) Genome analysis of Desulfotomaculum gibsoniae strain Groll(T) a highly versatile Gram-positive sulfate-reducing bacterium Standards in genomic sciences 9 (3) :821-839.

http://www.ncbi.nlm.nih.gov/pubmed/25197466

2014 Krebes,J., Morgan,R.D., Bunk,B., Spröer,C., Luong,K., Parusel,R., Anton,B.P., König,C., Josenhans,C., Overmann,J., Roberts,R.J., Korlach,J., Suerbaum,S. ( 2014 ) The complex methylome of the human gastric pathogen Helicobacter pylori Nucleic acids research 42 (4) :2415-2432.

http://www.ncbi.nlm.nih.gov/pubmed/24302578

2014 Kosowski,K., Schmidt,M., Pukall,R., Hause,G., Kämpfer,P., Lechner,U. ( 2014 ) Bacillus pervagus sp. nov. and Bacillus andreesenii sp. nov., isolated from a composting reactor International journal of systematic and evolutionary microbiology 64 (Pt 1) :88-94.

http://www.ncbi.nlm.nih.gov/pubmed/24021730

2014 Kizilova,A.K., Sukhacheva,M.V., Pimenov,N.V., Yurkov,A.M., Kravchenko,I.K. ( 2014 ) Methane oxidation activity and diversity of aerobic methanotrophs in pH-neutral and semi-neutral thermal springs of the Kunashir Island, Russian Far East Extremophiles : life under extreme conditions 18 (2) :207-218.

http://www.ncbi.nlm.nih.gov/pubmed/24343375

2014 Kaden,R., Spröer,C., Beyer,D., Krolla-Sidenstein,P. ( 2014 ) Rhodoferax saidenbachensis sp. nov., a psychrotolerant, very slowly growing bacterium within the family Comamonadaceae, proposal of appropriate taxonomic position of Albidiferax ferrireducens strain T118T in the genus Rhodoferax and emended description of the genus Rhodoferax International journal of systematic and evolutionary microbiology 64 (Pt 4) :1186-1193.

http://www.ncbi.nlm.nih.gov/pubmed/24408525

2014 Huber,K.J., Wüst,P.K., Rohde,M., Overmann,J., Foesel,B.U. ( 2014 ) Aridibacter famidurans gen. nov., sp. nov. and Aridibacter kavangonensis sp. nov., two novel members of subdivision 4 of the Acidobacteria isolated from semiarid savannah soil International journal of systematic and evolutionary microbiology 64 (Pt 6) :1866-1875.

http://www.ncbi.nlm.nih.gov/pubmed/24573163

2014 Huber,K.J., Wüst,P.K., Rohde,M., Overmann,J., Foesel,B.U. ( 2014 ) Aridibacter famidurans gen. nov., sp. nov. and Aridibacter kavangonensis sp. nov., two novel members of subdivision 4 of the Acidobacteria isolated from semiarid savannah soil International journal of systematic and evolutionary microbiology 64 (Pt 6) :1866-1875.

http://www.ncbi.nlm.nih.gov/pubmed/24573163

2014 Huber,K.J., Wüst,P.K., Rohde,M., Overmann,J., Foesel,B.U. ( 2014 ) Aridibacter famidurans gen. nov., sp. nov. and Aridibacter kavangonensis sp. nov., two novel members of subdivision 4 of the Acidobacteria isolated from semiarid savannah soil International journal of systematic and evolutionary microbiology 64 (Pt 6) :1866-1875.

http://www.ncbi.nlm.nih.gov/pubmed/24573163

2014 Hamilton,T.L., Bovee,R.J., Thiel,V., Sattin,S.R., Mohr,W., Schaperdoth,I., Vogl,K., Gilhooly,W.P.,III, Lyons,T.W., Tomsho,L.P., Schuster,S.C., Overmann,J., Bryant,D.A., Pearson,A., Macalady,J.L. ( 2014 ) Coupled reductive and oxidative sulfur cycling in the phototrophic plate of a meromictic lake Geobiology 12 (5) :451-468.

http://www.ncbi.nlm.nih.gov/pubmed/24976102

2014 Göker,M., Spring,S., Scheuner,C., Anderson,I., Zeytun,A., Nolan,M., Lucas,S., Tice,H., DelRio,T.G., Cheng,J.F., Han,C., Tapia,R., Goodwin,L.A., Pitluck,S., Liolios,K., Mavromatis,K., Pagani,I., Ivanova,N., Mikhailova,N., Pati,A., Chen,A., Palaniappan,K., Land,M., Hauser,L., Chang,Y.J., Jeffries,C.D., Rohde,M., Detter,J.C., Woyke,T., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Kyrpides,N.C., Klenk,H.P., Lapidus,A. ( 2014 ) Genome sequence of the Thermotoga thermarum type strain (LA3(T)) from an African solfataric spring Standards in genomic sciences 9 (3) :1105-1117.

http://www.ncbi.nlm.nih.gov/pubmed/25197486

2014 Göker,M., Lu,M., Fiebig,A., Nolan,M., Lapidus,A., Tice,H., DelRio,T.G., Cheng,J.F., Han,C., Tapia,R., Goodwin,L.A., Pitluck,S., Liolios,K., Mavromatis,K., Pagani,I., Ivanova,N., Mikhailova,N., Pati,A., Chen,A., Palaniappan,K., Land,M., Mayilraj,S., Rohde,M., Detter,J.C., Bunk,B., Spring,S., Wirth,R., Woyke,T., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Kyrpides,N.C., Klenk,H.P. ( 2014 ) Genome sequence of the mud-dwelling archaeon Methanoplanus limicola type strain (DSM 2279(T)), reclassification of Methanoplanus petrolearius as Methanolacinia petrolearia and emended descriptions of the genera Methanoplanus and Methanolacinia Standards in genomic sciences 9 (3) :1076-1088.

http://www.ncbi.nlm.nih.gov/pubmed/25197484