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Publications Department Microorganisms

sorted by publication date. For a complete list of the DSMZ publications, click here.

 

Publications
2019 Rose,H., Döring,I., Vetten,H.J., Menzel,W., Richert-Pöggeler,K., Maiß,E. ( 2019 ) Complete genome sequence and construction of an infectious full-length cDNA clone of celery latent virus

2019 Chen,S.L., Brown,R.K., Patil,S.A., Huber,K.J., Overmann,J., Schroder,U. ( 2019 ) Aerobic microbial electrochemical technology based on the coexistence and interactions of aerobes and exoelectrogens for synergistic pollutant removal from wastewater Environmental Science-Water Research & Technology 5 (1) :60-69.

://WOS:000454086700006
2019 Will,S.E., Henke,P., Boedeker,C., Huang,S., Brinkmann,H., Rohde,M., Jarek,M., Friedl,T., Seufert,S., Schumacher,M., Overmann,J., Neumann-Schaal,M., Petersen,J. ( 2019 ) Day and Night: Metabolic Profiles and Evolutionary Relationships of Six Axenic Non-Marine Cyanobacteria Genome Biol Evol 11 (1) :270-294.

https://www.ncbi.nlm.nih.gov/pubmed/30590650
2019 Stackebrandt,E., Smith,D. ( 2019 ) Paradigm shift in species description: the need to move towards a tabular format Arch Microbiol 201 (2) :143-145.

https://www.ncbi.nlm.nih.gov/pubmed/30539264
2019 Hoetzinger,M., Schmidt,J., Pitt,A., Koll,U., Lang,E., Hahn,M.W. ( 2019 ) Polynucleobacter paneuropaeus sp. nov., characterized by six strains isolated from freshwater lakes located along a 3000 km north-south cross-section across Europe Int J Syst Evol Microbiol 69 (1) :203-213.

https://www.ncbi.nlm.nih.gov/pubmed/30465643
2018 Kemter,F.S., Messerschmidt,S.J., Schallopp,N., Sobetzko,P., Lang,E., Bunk,B., Sproer,C., Teschler,J.K., Yildiz,F.H., Overmann,J., Waldminghaus,T. ( 2018 ) Synchronous termination of replication of the two chromosomes is an evolutionary selected feature in Vibrionaceae PLoS Genet 14 (3) :e1007251.

https://www.ncbi.nlm.nih.gov/pubmed/29505558
2018 Adriaenssens,E.M., Wittmann,J., Kuhn,J.H., Turner,D., Sullivan,M.B., Dutilh,B.E., Jang,H.B., vanZyl,L.J., Klumpp,J., Lobocka,M., MorenoSwitt,A.I., Rumnieks,J., Edwards,R.A., Uchiyama,J., Alfenas-Zerbini,P., Petty,N.K., Kropinski,A.M., Barylski,J., Gillis,A., Clokie,M.R.C., Prangishvili,D., Lavigne,R., Aziz,R.K., Duffy,S., Krupovic,M., Poranen,M.M., Knezevic,P., Enault,F., Tong,Y., Oksanen,H.M., RodneyBrister,J. ( 2018 ) Taxonomy of prokaryotic viruses: 2017 update from the ICTV Bacterial and Archaeal Viruses Subcommittee Arch Virol 163 (4) :1125-1129.

https://www.ncbi.nlm.nih.gov/pubmed/29356990
2018 Spring,S., Bunk,B., Sproer,C., Rohde,M., Klenk,H.P. ( 2018 ) Genome biology of a novel lineage of planctomycetes widespread in anoxic aquatic environments Environ Microbiol

https://www.ncbi.nlm.nih.gov/pubmed/29697183
2018 Sybesma,W., Rohde,C., Bardy,P., Pirnay,J.P., Cooper,I., Caplin,J., Chanishvili,N., Coffey,A., DeVos,D., Scholz,A.H., McCallin,S., Puschner,H.M., Pantucek,R., Aminov,R., Doskar,J., Kurtbke,D.I. ( 2018 ) Silk Route to the Acceptance and Re-Implementation of Bacteriophage Therapy-Part II Antibiotics (Basel) 7 (2)

https://www.ncbi.nlm.nih.gov/pubmed/29690620
2018 Schmidt,I.H.E., Gildhorn,C., Boning,M.A.L., Kulow,V.A., Steinmetz,I., Bast,A. ( 2018 ) Burkholderia pseudomallei modulates host iron homeostasis to facilitate iron availability and intracellular survival PLoS Negl Trop Dis 12 (1) :e0006096.

https://www.ncbi.nlm.nih.gov/pubmed/29329289
2018 Spirin,V., Malysheva,V., Yurkov,A., Miettinen,O., Larsson,K.H. ( 2018 ) Studies in the Phaeotremella foliacea group (Tremellomycetes, Basidiomycota) Mycological Progress 17 (4) :451-466.

://WOS:000427507300004
2018 Thomson,S.A., Pyle,R.L., Ahyong,S.T., Alonso-Zarazaga,M., Ammirati,J., Araya,J.F., Ascher,J.S., Audisio,T.L., Azevedo-Santos,V.M., Bailly,N., Baker,W.J., Balke,M., Barclay,M.V.L., Barrett,R.L., Benine,R.C., Bickerstaff,J.R.M., Bouchard,P., Bour,R., Bourgoin,T., Boyko,C.B., Breure,A.S.H., Brothers,D.J., Byng,J.W., Campbell,D., Ceriaco,L.M.P., Cernak,I., Cerretti,P., Chang,C.H., Cho,S., Copus,J.M., Costello,M.J., Cseh,A., Csuzdi,C., Culham,A., D'Elia,G., d'Udekemd'Acoz,C., Daneliya,M.E., Dekker,R., Dickinson,E.C., Dickinson,T.A., vanDijk,P.P., Dijkstra,K.B., Dima,B., Dmitriev,D.A., Duistermaat,L., Dumbacher,J.P., Eiserhardt,W.L., Ekrem,T., Evenhuis,N.L., Faille,A., Fernandez-Triana,J.L., Fiesler,E., Fishbein,M., Fordham,B.G., Freitas,A.V.L., Friol,N.R., Fritz,U., Froslev,T., Funk,V.A., Gaimari,S.D., Garbino,G.S.T., Garraffoni,A.R.S., Geml,J., Gill,A.C., Gray,A., Grazziotin,F.G., Greenslade,P., Gutierrez,E.E., Harvey,M.S., Hazevoet,C.J., He,K., He,X., Helfer,S., Helgen,K.M., vanHeteren,A.H., HitaGarcia,F., Holstein,N., Horvath,M.K., Hovenkamp,P.H., Hwang,W.S., Hyvonen,J., Islam,M.B., Iverson,J.B., Ivie,M.A., Jaafar,Z., Jackson,M.D., Jayat,J.P., Johnson,N.F., Kaiser,H., Klitgard,B.B., Knapp,D.G., Kojima,J.I., Koljalg,U., Kontschan,J., Krell,F.T., Krisai-Greilhuber,I., Kullander,S., Latella,L., Lattke,J.E., Lencioni,V., Lewis,G.P., Lhano,M.G., Lujan,N.K., Luksenburg,J.A., Mariaux,J., Marinho-Filho,J., Marshall,C.J., Mate,J.F., McDonough,M.M., Michel,E., Miranda,V.F.O., Mitroiu,M.D., Molinari,J., Monks,S., Moore,A.J., Moratelli,R., Muranyi,D., Nakano,T., Nikolaeva,S., Noyes,J., Ohl,M., Oleas,N.H., Orrell,T., Pall-Gergely,B., Pape,T., Papp,V., Parenti,L.R., Patterson,D., Pavlinov,I.Y., Pine,R.H., Poczai,P., Prado,J., Prathapan,D., Rabeler,R.K., Randall,J.E., Rheindt,F.E., Rhodin,A.G.J., Rodriguez,S.M., Rogers,D.C., Roque,F.O., Rowe,K.C., Ruedas,L.A., Salazar-Bravo,J., Salvador,R.B., Sangster,G., Sarmiento,C.E., Schigel,D.S., Schmidt,S., Schueler,F.W., Segers,H., Snow,N., Souza-Dias,P.G.B., Stals,R., Stenroos,S., Stone,R.D., Sturm,C.F., Stys,P., Teta,P., Thomas,D.C., Timm,R.M., Tindall,B.J., Todd,J.A., Triebel,D., Valdecasas,A.G., Vizzini,A., Vorontsova,M.S., deVos,J.M., Wagner,P., Watling,L., Weakley,A., Welter-Schultes,F., Whitmore,D., Wilding,N., Will,K., Williams,J., Wilson,K., Winston,J.E., Wuster,W., Yanega,D., Yeates,D.K., Zaher,H., Zhang,G., Zhang,Z.Q., Zhou,H.Z. ( 2018 ) Taxonomy based on science is necessary for global conservation PLoS Biol 16 (3) :e2005075.

https://www.ncbi.nlm.nih.gov/pubmed/29538381
2018 Yurkov,A.M. ( 2018 ) Yeasts of the soil - obscure but precious Yeast 35 (5) :369-378.

https://www.ncbi.nlm.nih.gov/pubmed/29365211
2018 Zecchin,S., Mueller,R.C., Seifert,J., Stingl,U., Anantharaman,K., vonBergen,M., Cavalca,L., Pester,M. ( 2018 ) Rice Paddy Nitrospirae Carry and Express Genes Related to Sulfate Respiration: Proposal of the New Genus "Candidatus Sulfobium" Applied and Environmental Microbiology 84 (5)

://WOS:000425012100012
2018 Rohde,C., Resch,G., Pirnay,J.P., Blasdel,B.G., Debarbieux,L., Gelman,D., Gorski,A., Hazan,R., Huys,I., Kakabadze,E., Lobocka,M., Maestri,A., Almeida,G.M.F., Makalatia,K., Malik,D.J., Maslanova,I., Merabishvili,M., Pantucek,R., Rose,T., Stverakova,D., VanRaemdonck,H., Verbeken,G., Chanishvili,N. ( 2018 ) Expert Opinion on Three Phage Therapy Related Topics: Bacterial Phage Resistance, Phage Training and Prophages in Bacterial Production Strains Viruses 10 (4)

https://www.ncbi.nlm.nih.gov/pubmed/29621199
2018 Hezbri,K., Nouioui,I., Rohde,M., Sproer,C., Schumann,P., Gtari,M., Klenk,H.P., Montero-Calasanz,M.D.C., Ghodhbane-Gtari,F. ( 2018 ) Blastococcus xanthinilyticus sp. nov., isolated from monument Int J Syst Evol Microbiol 68 (4) :1177-1183.

https://www.ncbi.nlm.nih.gov/pubmed/29458502
2018 Hahn,M.W., Koll,U., Schmidt,J., Huymann,L.R., Karbon,G., Lang,E. ( 2018 ) Polynucleobacter hirudinilacicola sp. nov. and Polynucleobacter campilacus sp. nov., both isolated from freshwater systems Int J Syst Evol Microbiol

https://www.ncbi.nlm.nih.gov/pubmed/29939120
2018 Huber,K.J., Overmann,J. ( 2018 ) Vicinamibacteraceae fam. nov., the first described family within the subdivision 6 Acidobacteria Int J Syst Evol Microbiol 68 (7) :2331-2334.

https://www.ncbi.nlm.nih.gov/pubmed/29809123
2018 Mohammadipanah,F., Atasayar,E., Heidarian,S., Wink,J. ( 2018 ) Glycomyces sediminimaris sp. nov., a new species of actinobacteria isolated from marine sediment Int J Syst Evol Microbiol 68 (7) :2357-2363.

https://www.ncbi.nlm.nih.gov/pubmed/29869980
2018 Pitt,A., Schmidt,J., Lang,E., Whitman,W.B., Woyke,T., Hahn,M.W. ( 2018 ) Polynucleobacter meluiroseus sp. nov., a bacterium isolated from a lake located in the mountains of the Mediterranean island of Corsica Int J Syst Evol Microbiol 68 (6) :1975-1985.

https://www.ncbi.nlm.nih.gov/pubmed/29688164
2018 Hahnke,R.L., Meier-Kolthoff,J.P., García-López,M., Mukherjee,S., Huntemann,M., Ivanova,N.N., Woyke,T., Kyrpides,N.C., Klenk,H.P., Göker,M. ( 2018 ) Corrigendum: Genome-Based Taxonomic Classification of Bacteroidetes Front Microbiol 9 :304.

https://www.ncbi.nlm.nih.gov/pubmed/29491863
2018 Baschien,C., Hyde,K.D. ( 2018 ) Special issue on freshwater ascomycetes and other aquatic fungi Mycological Progress 17 (5) :509-+.

://WOS:000431049900001
2018 Buzzini,P., Turchetti,B., Yurkov,A. ( 2018 ) Extremophilic yeasts: the toughest yeasts around? Yeast 35 (8) :487-497.

https://www.ncbi.nlm.nih.gov/pubmed/29577430
2018 Nouioui,I., Carro,L., Garcia-Lopez,M., Meier-Kolthoff,J.P., Woyke,T., Kyrpides,N.C., Pukall,R., Klenk,H.P., Goodfellow,M., Goker,M. ( 2018 ) Genome-Based Taxonomic Classification of the Phylum Actinobacteria Front Microbiol 9 :2007.

https://www.ncbi.nlm.nih.gov/pubmed/30186281
2018 Boekhout,T., Daniel,H.M., Groenewald,M., Yurkov,A., Bai,F.Y., Robert,V. ( 2018 ) The Yeasts, a new online and updatable platform for yeast diversity Medical Mycology 56 :S153-S153.

://WOS:000434852700867
2018 Brandt,S.C., Ellinger,B., vanNguyen,T., Thi,Q.D., vanNguyen,G., Baschien,C., Yurkov,A., Hahnke,R.L., Schafer,W., Gand,M. ( 2018 ) A unique fungal strain collection from Vietnam characterized for high performance degraders of bioecological important biopolymers and lipids PLoS One 13 (8) :e0202695.

https://www.ncbi.nlm.nih.gov/pubmed/30161149
2018 Cockell,C.S., Schwendner,P., Perras,A., Rettberg,P., Beblo-Vranesevic,K., Bohmeier,M., Rabbow,E., Moissl-Eichinger,C., Wink,L., Marteinsson,V., Vannier,P., Gomez,F., Garcia-Descalzo,L., Ehrenfreund,P., Monaghan,E.P., Westall,F., Gaboyer,F., Amils,R., Malki,M., Pukall,R., Cabezas,P., Walter,N. ( 2018 ) Anaerobic microorganisms in astrobiological analogue environments: from field site to culture collection International Journal of Astrobiology 17 (4) :314-328.

://WOS:000443950500006
2018 Kuzmanovic,N., Smalla,K., Gronow,S., Pulawska,J. ( 2018 ) Rhizobium tumorigenes sp. nov., a novel plant tumorigenic bacterium isolated from cane gall tumors on thornless blackberry Sci Rep 8 (1) :9051.

https://www.ncbi.nlm.nih.gov/pubmed/29899540
2018 Masinova,T., Yurkov,A., Baldrian,P. ( 2018 ) Forest soil yeasts: Decomposition potential and the utilization of carbon sources Fungal Ecology 34 :10-19.

://WOS:000436916100002
2018 Nouioui,I., Carro,L., Sangal,V., Jando,M., Igual,J.M., Goodfellow,M., Klenk,H.P. ( 2018 ) Formal description of Mycobacterium neglectum sp. nov. and Mycobacterium palauense sp. nov., rapidly growing actinobacteria Antonie Van Leeuwenhoek 111 (7) :1209-1223.

https://www.ncbi.nlm.nih.gov/pubmed/29404824
2018 Heeger,F., Bourne,E.C., Baschien,C., Yurkov,A., Bunk,B., Sproer,C., Overmann,J., Mazzoni,C.J., Monaghan,M.T. ( 2018 ) Long-read DNA metabarcoding of ribosomal RNA in the analysis of fungi from aquatic environments Mol Ecol Resour 18 (6) :1500-1514.

https://www.ncbi.nlm.nih.gov/pubmed/30106226
2018 Bajerski,F., Stock,J., Hanf,B., Darienko,T., Heine-Dobbernack,E., Lorenz,M., Naujox,L., Keller,E.R.J., Schumacher,H.M., Friedl,T., Eberth,S., Mock,H.P., Kniemeyer,O., Overmann,J. ( 2018 ) ATP Content and Cell Viability as Indicators for Cryostress Across the Diversity of Life Front Physiol 9 :921.

https://www.ncbi.nlm.nih.gov/pubmed/30065659
2018 Damste,J.S.S., Rijpstra,W.I.C., Foesel,B.U., Huber,K.J., Overmann,J., Nakagawa,S., Kim,J.J., Dunfield,P.F., Dedysh,S.N., Villanueva,L. ( 2018 ) An overview of the occurrence of ether- and ester-linked iso-diabolic acid membrane lipids in microbial cultures of the Acidobacteria: Implications for brGDGT paleoproxies for temperature and pH Organic Geochemistry 124 :63-76.

://WOS:000443952100006
2018 Krishnan,R., Lang,E., Midha,S., Patil,P.B., Rameshkumar,N. ( 2018 ) Isolation and characterization of a novel 1-aminocyclopropane-1-carboxylate (ACC) deaminase producing plant growth promoting marine Gammaproteobacteria from crops grown in brackish environments. Proposal for Pokkaliibacter plantistimulans gen. nov., sp. nov., Balneatrichaceae fam. nov. in the order Oceanospirillales and an emended description of the genus Balneatrix Syst Appl Microbiol 41 (6) :570-580.

https://www.ncbi.nlm.nih.gov/pubmed/30139512
2018 Unfried,F., Becker,S., Robb,C.S., Hehemann,J.H., Markert,S., Heiden,S.E., Hinzke,T., Becher,D., Reintjes,G., Kruger,K., Avci,B., Kappelmann,L., Hahnke,R.L., Fischer,T., Harder,J., Teeling,H., Fuchs,B., Barbeyron,T., Amann,R.I., Schweder,T. ( 2018 ) Adaptive mechanisms that provide competitive advantages to marine bacteroidetes during microalgal blooms ISME J 12 (12) :2894-2906.

https://www.ncbi.nlm.nih.gov/pubmed/30061707
2018 Zammuto,V., Fuchs,F.M., Fiebrandt,M., Stapelmann,K., Ulrich,N.J., Maugeri,T.L., Pukall,R., Gugliandolo,C., Moeller,R. ( 2018 ) Comparing Spore Resistance of Bacillus Strains Isolated from Hydrothermal Vents and Spacecraft Assembly Facilities to Environmental Stressors and Decontamination Treatments Astrobiology 18 (11) :1425-1434.

https://www.ncbi.nlm.nih.gov/pubmed/30289268
2018 Nouioui,I., Ghodhbane-Gtari,F., Jando,M., Tisa,L.S., Klenk,H.P., Gtari,M. ( 2018 ) Frankia torreyi sp. nov., the first actinobacterium of the genus Frankia Brunchorst 1886, 174(AL) isolated in axenic culture Antonie Van Leeuwenhoek

https://www.ncbi.nlm.nih.gov/pubmed/30030730
2018 Oren,A., Garrity,G.M., Spring,S., Onrust,L., Petzoldt,D., Eeckhaut,V., DeMaesschalck,C., Haesebrouck,F., Rautenschlein,S., Ducatelle,R., VanImmerseel,F., Taras,D. ( 2018 ) Valid publication of the names Caecibacterium and Caecibacterium sporoformans Int J Syst Evol Microbiol

https://www.ncbi.nlm.nih.gov/pubmed/30556800
2018 Tindall,B.J. ( 2018 ) An analysis of the term 'standing in nomenclature', as used in the International Code of Nomenclature of Prokaryotes Int J Syst Evol Microbiol

https://www.ncbi.nlm.nih.gov/pubmed/30575500
2018 Tindall,B.J. ( 2018 ) Names above the rank of genus; the radical approach Int J Syst Evol Microbiol

https://www.ncbi.nlm.nih.gov/pubmed/30543321
2017 Matrosova,V.Y., Gaidamakova,E.K., Makarova,K.S., Grichenko,O., Klimenkova,P., Volpe,R.P., Tkavc,R., Ertem,G., Conze,I.H., Brambilla,E., Huntemann,M., Clum,A., Pillay,M., Palaniappan,K., Varghese,N., Mikhailova,N., Stamatis,D., Reddy,T., Daum,C., Shapiro,N., Ivanova,N., Kyrpides,N., Woyke,T., Daligault,H., Davenport,K., Erkkila,T., Goodwin,L.A., Gu,W., Munk,C., Teshima,H., Xu,Y., Chain,P., Woolbert,M., Gunde-Cimerman,N., Wolf,Y.I., Grebenc,T., Gostincar,C., Daly,M.J. ( 2017 ) High-quality genome sequence of the radioresistant bacterium Deinococcus ficus KS 0460 Stand Genomic Sci 12 :46.

https://www.ncbi.nlm.nih.gov/pubmed/28775794
2017 Birkeland,N.K., Schonheit,P., Poghosyan,L., Fiebig,A., Klenk,H.P. ( 2017 ) Complete genome sequence analysis of Archaeoglobus fulgidus strain 7324 (DSM 8774), a hyperthermophilic archaeal sulfate reducer from a North Sea oil field Stand Genomic Sci 12 :79.

https://www.ncbi.nlm.nih.gov/pubmed/29270248
2017 Garzetti,D., Brugiroux,S., Bunk,B., Pukall,R., McCoy,K.D., Macpherson,A.J., Stecher,B. ( 2017 ) High-Quality Whole-Genome Sequences of the Oligo-Mouse-Microbiota Bacterial Community Genome Announc 5 (42)

https://www.ncbi.nlm.nih.gov/pubmed/29051233
2017 Dannheim,H., Riedel,T., Neumann-Schaal,M., Bunk,B., Schober,I., Sproer,C., Chibani,C.M., Gronow,S., Liesegang,H., Overmann,J., Schomburg,D. ( 2017 ) Manual curation and reannotation of the genomes of Clostridium difficile 630Deltaerm and C. difficile 630 J Med Microbiol 66 (3) :286-293.

https://www.ncbi.nlm.nih.gov/pubmed/28357980
2017 Dreiseikelmann,B., Bunk,B., Sproer,C., Rohde,M., Nimtz,M., Wittmann,J. ( 2017 ) Characterization and genome comparisons of three Achromobacter phages of the family Siphoviridae Arch Virol 162 (8) :2191-2201.

https://www.ncbi.nlm.nih.gov/pubmed/28357512
2017 Riedel,T., Wittmann,J., Bunk,B., Schober,I., Sproer,C., Gronow,S., Overmann,J. ( 2017 ) A Clostridioides difficile bacteriophage genome encodes functional binary toxin-associated genes J Biotechnol 250 :23-28.

https://www.ncbi.nlm.nih.gov/pubmed/28216103
2017 BenHania,W., Joseph,M., Bunk,B., Sproer,C., Klenk,H.P., Fardeau,M.L., Spring,S. ( 2017 ) Characterization of the first cultured representative of a Bacteroidetes clade specialized on the scavenging of cyanobacteria Environ Microbiol 19 (3) :1134-1148.

https://www.ncbi.nlm.nih.gov/pubmed/27943642
2017 Stackebrandt,E., Smith,D. ( 2017 ) Expanding the 'Digital Protologue' database (DPD) to 'Archives of Microbiology': an offer to scientists and science Arch Microbiol 199 (4) :519-520.

https://www.ncbi.nlm.nih.gov/pubmed/28343315
2017 Riedl,S., Brown,R.K., Klockner,S., Huber,K.J., Bunk,B., Overmann,J., Schroder,U. ( 2017 ) Successive Conditioning in Complex Artificial Wastewater Increases the Performance of Electrochemically Active Biofilms Treating Real Wastewater Chemelectrochem 4 (12) :3081-3090.

://WOS:000419269000009
2017 Rast,P., Glockner,I., Boedeker,C., Jeske,O., Wiegand,S., Reinhardt,R., Schumann,P., Rohde,M., Spring,S., Glockner,F.O., Jogler,C., Jogler,M. ( 2017 ) Three Novel Species with Peptidoglycan Cell Walls form the New Genus Lacunisphaera gen. nov. in the Family Opitutaceae of the Verrucomicrobial Subdivision 4 Front Microbiol 8 :202.

https://www.ncbi.nlm.nih.gov/pubmed/28243229
2017 Nasr,S., Mohammadimehr,M., Vaghei,M.G., Amoozegar,M.A., Fazeli,S.A.S., Yurkov,A. ( 2017 ) Jaminaea pallidilutea sp nov (Microstromatales), a basidiomycetous yeast isolated from plant material of mangrove forests in Iran International Journal of Systematic and Evolutionary Microbiology 67 (11) :4405-4408.

://WOS:000414976000018
2017 Yurkov,A.M., Dauchy,D., Peter,G. ( 2017 ) Meyerozyma amylolytica sp nov from temperate deciduous trees and the transfer of five Candida species to the genus Meyerozyma International Journal of Systematic and Evolutionary Microbiology 67 (10) :3977-3981.

://WOS:000413484800045
2017 Wijayawardene,N.N., Hyde,K.D., Rajeshkumar,K.C., Hawksworth,D.L., Madrid,H., Kirk,P.M., Braun,U., Singh,R.V., Crous,P.W., Kukwa,M., Lucking,R., Kurtzman,C.P., Yurkov,A., Haelewaters,D., Aptroot,A., Lumbsch,H.T., Timdal,E., Ertz,D., Etayo,J., Phillips,A.J.L., Groenewald,J.Z., Papizadeh,M., Selbmann,L., Dayarathne,M.C., Weerakoon,G., Jones,E.B.G., Suetrong,S., Tian,Q., Castaneda-Ruiz,R.F., Bahkali,A.H., Pang,K.L., Tanaka,K., Dai,D.Q., Sakayaroj,J., Hujslova,M., Lombard,L., Shenoy,B.D., Suija,A., Maharachchikumbura,S.S.N., Thambugala,K.M., Wanasinghe,D.N., Sharma,B.O., Gaikwad,S., Pandit,G., Zucconi,L., Onofri,S., Egidi,E., Raja,H.A., Kodsueb,R., Caceres,M.E.S., Perez-Ortega,S., Fiuza,P.O., Monteiro,J.S., Vasilyeva,L.N., Shivas,R.G., Prieto,M., Wedin,M., Olariaga,I., Lateef,A.A., Agrawal,Y., Fazeli,S.A.S., Amoozegar,M.A., Zhao,G.Z., Pfliegler,W.P., Sharma,G., Oset,M., Abdel-Wahab,M.A., Takamatsu,S., Bensch,K., deSilva,N.I., DeKesel,A., Karunarathna,A., Boonmee,S., Pfister,D.H., Lu,Y.Z., Luo,Z.L., Boonyuen,N., Daranagama,D.A., Senanayake,I.C., Jayasiri,S.C., Samarakoon,M.C., Zeng,X.Y., Doilom,M., Quijada,L., Rampadarath,S., Heredia,G., Dissanayake,A.J., Jayawardana,R.S., Perera,R.H., Tang,L.Z., Phukhamsakda,C., Hernandez-Restrepo,M., Ma,X.Y., Tibpromma,S., Gusmao,L.F.P., Weerahewa,D., Karunarathna,S.C. ( 2017 ) Notes for genera: Ascomycota Fungal Diversity 86 (1) :1-594.

://WOS:000413448200001
2017 Pontes,A., Rohl,A., MaLdonado,C., Yurkov,A.M., Sampaio,J.P. ( 2017 ) Cryptotrichosporon argae sp nov., Cryptotrichosporon brontae sp nov and Cryptotrichosporon steropae sp nov., isolated from forest soils International Journal of Systematic and Evolutionary Microbiology 67 (9) :3610-3614.

://WOS:000417836100079
2017 Caton,L., Yurkov,A., Giesbers,M., Dijksterhuis,J., Ingham,C.J. ( 2017 ) Physically Triggered Morphology Changes in a Novel Acremonium Isolate Cultivated in Precisely Engineered Microfabricated Environments Frontiers in Microbiology 8

://WOS:000406157700002
2017 Brasch,J., Beck-Jendroscheck,V., Voss,K., Yurkov,A., Stchigel,A.M., Graser,Y. ( 2017 ) Xanthothecium peruvianum isolated from human stratum corneum: A case report, characterisation and short review that suggest emendation of Arachnomyces peruvianus Mycoses 60 (7) :469-476.

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2017 Schulz,M., Sicker,D., Schackow,O., Hennig,L., Yurkov,A., Siebers,M., Hofmann,D., Disko,U., Ganimede,C., Mondani,L., Tabaglio,V., Marocco,A. ( 2017 ) Interspecies-cooperations of abutilon theophrasti with root colonizing microorganisms disarm BOA-OH allelochemicals Plant Signaling & Behavior 12 (8)

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2017 Adriaenssens,E.M., Krupovic,M., Knezevic,P., Ackermann,H.W., Barylski,J., Brister,J.R., Clokie,M.R., Duffy,S., Dutilh,B.E., Edwards,R.A., Enault,F., Jang,H.B., Klumpp,J., Kropinski,A.M., Lavigne,R., Poranen,M.M., Prangishvili,D., Rumnieks,J., Sullivan,M.B., Wittmann,J., Oksanen,H.M., Gillis,A., Kuhn,J.H. ( 2017 ) Taxonomy of prokaryotic viruses: 2016 update from the ICTV bacterial and archaeal viruses subcommittee Arch Virol 162 (4) :1153-1157.

https://www.ncbi.nlm.nih.gov/pubmed/28040838
2017 Avci,B., Hahnke,R.L., Chafee,M., Fischer,T., Gruber-Vodicka,H., Tegetmeyer,H.E., Harder,J., Fuchs,B.M., Amann,R.I., Teeling,H. ( 2017 ) Genomic and physiological analyses of 'Reinekea forsetii' reveal a versatile opportunistic lifestyle during spring algae blooms Environ Microbiol 19 (3) :1209-1221.

https://www.ncbi.nlm.nih.gov/pubmed/28000419
2017 Beblo-Vranesevic,K., Bohmeier,M., Perras,A.K., Schwendner,P., Rabbow,E., Moissl-Eichinger,C., Cockell,C.S., Pukall,R., Vannier,P., Marteinsson,V.T., Monaghan,E.P., Ehrenfreund,P., Garcia-Descalzo,L., Gomez,F., Malki,M., Amils,R., Gaboyer,F., Westall,F., Cabezas,P., Walter,N., Rettberg,P. ( 2017 ) The responses of an anaerobic microorganism, Yersinia intermedia MASE-LG-1 to individual and combined simulated Martian stresses PLoS One 12 (10) :e0185178.

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2017 Herbold,C.W., Lehtovirta-Morley,L.E., Jung,M.Y., Jehmlich,N., Hausmann,B., Han,P., Loy,A., Pester,M., Sayavedra-Soto,L.A., Rhee,S.K., Prosser,J.I., Nicol,G.W., Wagner,M., Gubry-Rangin,C. ( 2017 ) Ammonia-oxidising archaea living at low pH: Insights from comparative genomics Environ Microbiol 19 (12) :4939-4952.

https://www.ncbi.nlm.nih.gov/pubmed/29098760
2017 Koskinen,K., Rettberg,P., Pukall,R., Auerbach,A., Wink,L., Barczyk,S., Perras,A., Mahnert,A., Margheritis,D., Kminek,G., Moissl-Eichinger,C. ( 2017 ) Microbial biodiversity assessment of the European Space Agency's ExoMars 2016 mission Microbiome 5 (1) :143.

https://www.ncbi.nlm.nih.gov/pubmed/29070062
2017 Atasayar,E., Zimmermann,O., Sproer,C., Schumann,P., Gross,U. ( 2017 ) Corynebacterium gottingense sp nov., isolated from a clinical patient International Journal of Systematic and Evolutionary Microbiology 67 (11) :4494-4499.

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2017 Rottig,A., Atasayar,E., Meier-Kolthoff,J.P., Sproer,C., Schumann,P., Schauer,J., Steinbuchel,A. ( 2017 ) Streptomyces jeddahensis sp nov., an oleaginous bacterium isolated from desert soil International Journal of Systematic and Evolutionary Microbiology 67 (6) :1676-1682.

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2017 Wink,J., Schumann,P., Atasayar,E., Klenk,H.P., Zaburannyi,N., Westermann,M., Martin,K., Glaeser,S.P., Kampfer,P. ( 2017 ) 'Streptomyces caelicus', an antibiotic-producing species of the genus Streptomyces, and Streptomyces canchipurensis Li et al. 2015 are later heterotypic synonyms of Streptomyces muensis Ningthoujam et al. 2014 International Journal of Systematic and Evolutionary Microbiology 67 (3) :548-556.

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2017 Huber,K.J., Geppert,A.M., Gross,U., Luckner,M., Wanner,G., Cooper,P., Abakah,J., Janssen,I., Overmann,J. ( 2017 ) Aridibacter nitratireducens sp nov., a member of the family Blastocatellaceae, class Blastocatellia, isolated from an African soil International Journal of Systematic and Evolutionary Microbiology 67 (11) :4487-4493.

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2017 Hahn,M.W., Schmidt,J., Koll,U., Rohde,M., Verbarg,S., Pitt,A., Nakai,R., Naganuma,T., Lang,E. ( 2017 ) Silvanigrella aquatica gen. nov., sp nov., isolated from a freshwater lake, description of Silvanigrellaceae fam. nov and Silvanigrellales ord. nov., reclassification of the order Bdellovibrionales in the class Oligoflexia, reclassification of the families Bacteriovoracaceae and Halobacteriovoraceae in the new order Bacteriovoracales ord. nov., and reclassification of the family Pseudobacteriovoracaceae in the order Oligoflexales International Journal of Systematic and Evolutionary Microbiology 67 (8) :2555-2568.

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2017 Tindall,B.J. ( 2017 ) Clarifying the limitations on Rule 18a and Rule 30 of the International Code of Nomenclature of Prokaryotes International Journal of Systematic and Evolutionary Microbiology 67 (2) :505-506.

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2017 Tindall,B.J., Sutton,G., Garrity,G.M. ( 2017 ) Enterobacter aerogenes Hormaeche and Edwards 1960 (Approved Lists 1980) and Klebsiella mobilis Bascomb et al. 1971 (Approved Lists 1980) share the same nomenclatural type (ATCC 13048) on the Approved Lists and are homotypic synonyms, with consequences for the name Klebsiella mobilis Bascomb et al. 1971 (Approved Lists 1980) International Journal of Systematic and Evolutionary Microbiology 67 (2) :502-504.

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2017 Tindall,B.J. ( 2017 ) The consequences of Bacillus axarquiensis Ruiz-Garcia et al. 2005, Bacillus malacitensis Ruiz-Garcia et al. 2005 and Brevibacterium halotolerans Delaporte and Sasson 1967 (Approved Lists 1980) being treated as heterotypic synonyms International Journal of Systematic and Evolutionary Microbiology 67 (1) :175-176.

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2017 Pereira,P.H.F., Macrae,A., Reinert,F., deSouza,R.F., Coelho,R.R.R., Potter,G., Klenk,H.P., Labeda,D.P. ( 2017 ) Streptomyces odonnellii sp nov., a proteolytic streptomycete isolated from soil under cerrado (savanna) vegetation cover International Journal of Systematic and Evolutionary Microbiology 67 (12) :5211-5215.

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2017 Nouioui,I., Sangal,V., Carro,L., Teramoto,K., Jando,M., Montero-Calasanz,M.D., Igual,J.M., Sutcliffe,I., Goodfellow,M., Klenk,H.P. ( 2017 ) Two novel species of rapidly growing mycobacteria: Mycobacterium lehmannii sp nov and Mycobacterium neumannii sp nov. International Journal of Systematic and Evolutionary Microbiology 67 (12) :4948-4955.

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2017 Nouioui,I., Carro,L., Teramoto,K., Igual,J.M., Jando,M., Montero-Calasanz,M.D., Sutcliffe,I., Sangal,V., Goodfellow,M., Klenk,H.P. ( 2017 ) Mycobacterium eburneum sp nov., a non-chromogenic, fast-growing strain isolated from sputum International Journal of Systematic and Evolutionary Microbiology 67 (9) :3174-3181.

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2017 Hahn,M.W., Koll,U., Karbon,G., Schmidt,J., Lang,E. ( 2017 ) Polynucleobacter aenigmaticus sp. nov. isolated from the permanently anoxic monimolimnion of a temperate meromictic lake Int J Syst Evol Microbiol 67 (11) :4646-4654.

https://www.ncbi.nlm.nih.gov/pubmed/29022553
2017 Hahn,M.W., Karbon,G., Koll,U., Schmidt,J., Lang,E. ( 2017 ) Polynucleobacter sphagniphilus sp. nov. a planktonic freshwater bacterium isolated from an acidic and humic freshwater habitat Int J Syst Evol Microbiol 67 (9) :3261-3267.

https://www.ncbi.nlm.nih.gov/pubmed/28829016
2017 Hahn,M.W., Huymann,L.R., Koll,U., Schmidt,J., Lang,E., Hoetzinger,M. ( 2017 ) Polynucleobacter wuianus sp. nov., a free-living freshwater bacterium affiliated with the cryptic species complex PnecC Int J Syst Evol Microbiol 67 (2) :379-385.

https://www.ncbi.nlm.nih.gov/pubmed/27902302
2017 Tancsics,A., Mathe,I., Benedek,T., Toth,E.M., Atasayar,E., Sproer,C., Marialigeti,K., Felfoldi,T., Kriszt,B. ( 2017 ) Rhodococcus sovatensis sp. nov., an actinomycete isolated from the hypersaline and heliothermal Lake Ursu Int J Syst Evol Microbiol 67 (2) :190-196.

https://www.ncbi.nlm.nih.gov/pubmed/27902266
2017 ChaabaneChaouch,F., Bouras,N., Mokrane,S., Bouznada,K., Zitouni,A., Potter,G., Sproer,C., Klenk,H.P., Sabaou,N. ( 2017 ) Planomonospora algeriensis sp. nov., an actinobacterium isolated from a Saharan soil of Algeria Antonie Van Leeuwenhoek 110 (2) :245-252.

https://www.ncbi.nlm.nih.gov/pubmed/27803992
2017 Choi,D.H., Jang,G.I., Lapidus,A., Copeland,A., Reddy,T.B.K., Mukherjee,S., Huntemann,M., Varghese,N., Ivanova,N., Pillay,M., Tindall,B.J., Goker,M., Woyke,T., Klenk,H.P., Kyrpides,N.C., Cho,B.C. ( 2017 ) Draft genome sequence of Marinobacterium rhizophilum CL-YJ9(T) (DSM 18822(T)), isolated from the rhizosphere of the coastal tidal-flat plant Suaeda japonica Stand Genomic Sci 12 :65.

https://www.ncbi.nlm.nih.gov/pubmed/29093768
2017 Panschin,I., Becher,M., Verbarg,S., Sproer,C., Rohde,M., Schuler,M., Amann,R.I., Harder,J., Tindall,B.J., Hahnke,R.L. ( 2017 ) Description of Gramella forsetii sp nov., a marine Flavobacteriaceae isolated from North Sea water, and emended description of Gramella gaetbulicola Cho et al. 2011 International Journal of Systematic and Evolutionary Microbiology 67 (3) :697-703.

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2017 Riedel,T., Wetzel,D., Hofmann,J.D., Plorin,S., Dannheim,H., Berges,M., Zimmermann,O., Bunk,B., Schober,I., Sproer,C., Liesegang,H., Jahn,D., Overmann,J., Gross,U., Neumann-Schaal,M. ( 2017 ) High metabolic versatility of different toxigenic and non-toxigenic Clostridioides difficile isolates Int J Med Microbiol 307 (6) :311-320.

https://www.ncbi.nlm.nih.gov/pubmed/28619474
2017 Schmidt,I., Riedel,T., Schober,I., Bunk,B., Sproer,C., Bierbrodt,A., Lehnherr,H., Wittmann,J. ( 2017 ) Genome Sequence of Escherichia coli E28, a Multidrug-Resistant Strain Isolated from a Chicken Carcass, and Its Spontaneously Inducible Prophage Genome Announc 5 (22)

https://www.ncbi.nlm.nih.gov/pubmed/28572305
2017 Schumann,P., Pukall,R. ( 2017 ) Leucobacter weissii sp nov., an isolate from activated sludge once described as first representative of the peptidoglycan variation B2 delta, and emended description of the genus Leucobacter International Journal of Systematic and Evolutionary Microbiology 67 (12) :5244-5251.

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2016 Yurkov,A.M., Rohl,O., Pontes,A., Carvalho,C., Maldonado,C., Sampaio,J.P. ( 2016 ) Local climatic conditions constrain soil yeast diversity patterns in Mediterranean forests, woodlands and scrub biome FEMS Yeast Res 16 (1)

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2016 Wüst,P.K., Foesel,B.U., Geppert,A., Huber,K.J., Luckner,M., Wanner,G., Overmann,J. ( 2016 ) Brevitalea aridisoli, B. deliciosa, and Arenimicrobium luteum, three novel species of Acidobacteria subdivision 4 (class Blastocatellia) isolated from Namibian savanna soil and description of the novel family Pyrinomonadaceae Int J Syst Evol Microbiol

2016 Foesel,B.U., Geppert,A., Rohde,M., Overmann,J. ( 2016 ) Parviterribacter kavangonensis gen. nov., sp. nov. and Parviterribacter multiflagellatus sp. nov., novel members of Parviterribacteraceae fam. nov. within the order Solirubrobacterales, and emended descriptions of the classes Thermoleophilia and Rubrobacteria and their orders and families International Journal of Systematic and Evolutionary Microbiology 66 (2) :652-665.

http://ijs.microbiologyresearch.org/content/journal/ijsem/10.1099/ijsem.0.000770
2016 Foesel,B.U., Mayer,S., Luckner,M., Wanner,G., Rohde,M., Overmann,J. ( 2016 ) Occallatibacter riparius gen. nov., sp. nov. and Occallatibacter savannae sp. nov., acidobacteria isolated from Namibian soils, and emended description of the family Acidobacteriaceae International Journal of Systematic and Evolutionary Microbiology 66 (1) :219-229.

http://ijs.microbiologyresearch.org/content/journal/ijsem/10.1099/ijsem.0.000700
2016 Lagkouvardos,I., Pukall,R., Abt,B., Foesel,B.U., Meier-Kolthoff,J.P., Kumar,N., Bresciani,A., Martínez,I., Just,S., Ziegler,C., Brugiroux,S., Garzetti,D., Wenning,M., Bui,T.P.N., Wang,J., Hugenholtz,F., Plugge,C.M., Peterson,D.A., Hornef,M.W., Baines,J.F., Smidt,H., Walter,J., Kristiansen,K., Nielsen,H.B., Haller,D., Overmann,J., Stecher,B., Clavel,T. ( 2016 ) The Mouse Intestinal Bacterial Collection (miBC) provides host-specific insight into cultured diversity and functional potential of the gut microbiota Nature Microbiology 1 :16131.

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2016 Doijad,S., Imirzalioglu,C., Yao,Y., Pati,N.B., Falgenhauer,L., Hain,T., Foesel,B.U., Abt,B., Overmann,J., Mirambo,M.M., Mshana,S.E., Chakraborty,T. ( 2016 ) Enterobacter bugandensis sp. nov., isolated from neonatal blood International Journal of Systematic and Evolutionary Microbiology 66 (2) :968-974.

http://ijs.microbiologyresearch.org/content/journal/ijsem/10.1099/ijsem.0.000821
2016 Antunes,A., Stackebrandt,E., Lima,N. ( 2016 ) Fueling the Bio-economy: European Culture Collections and Microbiology Education and Training Trends Microbiol 24 (2) :77-79.

https://www.ncbi.nlm.nih.gov/pubmed/26727416
2016 Spring,S., Bunk,B., Sproer,C., Schumann,P., Rohde,M., Tindall,B.J., Klenk,H.P. ( 2016 ) Characterization of the first cultured representative of Verrucomicrobia subdivision 5 indicates the proposal of a novel phylum ISME J 10 (12) :2801-2816.

https://www.ncbi.nlm.nih.gov/pubmed/27300277
2016 Expertroundtableon,a., re-implementationofbacteriophage,t. ( 2016 ) Silk route to the acceptance and re-implementation of bacteriophage therapy Biotechnol J 11 (5) :595-600.

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2016 Boundy-Mills,K.L., Glantschnig,E., Roberts,I.N., Yurkov,A., Casaregola,S., Daniel,H.M., Groenewald,M., Turchetti,B. ( 2016 ) Yeast culture collections in the twenty-first century: new opportunities and challenges Yeast 33 (7) :243-60.

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2016 Yurkov,A.M., Wehde,T., Federici,J., Schafer,A.M., Ebinghaus,M., Lotze-Engelhard,S., Mittelbach,M., Prior,R., Richter,C., Rohl,O., Begerow,D. ( 2016 ) Yeast diversity and species recovery rates from beech forest soils Mycological Progress 15 (8) :845-859.

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2016 Rameshkumar,N., Lang,E., Tanaka,N. ( 2016 ) Description of Vogesella oryzae sp nov., isolated from the rhizosphere of saline tolerant pokkali rice Systematic and Applied Microbiology 39 (1) :20-24.

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2016 Ercibengoa,M., Bell,M., Marimom,J.M., Humrighouse,B., Klenk,H.P., Potter,G., Perez-Trallero,E. ( 2016 ) Nocardia donostiensis sp nov., isolated from human respiratory specimens Antonie Van Leeuwenhoek International Journal of General and Molecular Microbiology 109 (5) :653-660.

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2016 Debarbieux,L., Pirnay,J.P., Verbeken,G., DeVos,D., Merabishvili,M., Huys,I., Patey,O., Schoonjans,D., Vaneechoutte,M., Zizi,M., Rohde,C. ( 2016 ) A bacteriophage journey at the European Medicines Agency Fems Microbiology Letters 363 (2)

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2016 Krupovic,M., Dutilh,B.E., Adriaenssens,E.M., Wittmann,J., Vogensen,F.K., Sullivan,M.B., Rumnieks,J., Prangishvili,D., Lavigne,R., Kropinski,A.M., Klumpp,J., Gillis,A., Enault,F., Edwards,R.A., Duffy,S., Clokie,M.R., Barylski,J., Ackermann,H.W., Kuhn,J.H. ( 2016 ) Taxonomy of prokaryotic viruses: update from the ICTV bacterial and archaeal viruses subcommittee Arch Virol 161 (4) :1095-9.

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2016 Mittelbach,M., Yurkov,A.M., Stoll,R., Begerow,D. ( 2016 ) Inoculation order of nectar-borne yeasts opens a door for transient species and changes nectar rewarded to pollinators Fungal Ecology 22 :90-97.

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2016 Bouznada,K., Bouras,N., Mokrane,S., ChaabaneChaouch,F., Zitouni,A., Potter,G., Sproer,C., Klenk,H.P., Sabaou,N. ( 2016 ) Saccharothrix isguenensis sp. nov., an actinobacterium isolated from desert soil Int J Syst Evol Microbiol 66 (11) :4785-4790.

https://www.ncbi.nlm.nih.gov/pubmed/27535702