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Publications Department Microorganisms

sorted by publication date. For a complete list of the DSMZ publications, click here.

 

Publications
2018 Hahnke,R.L., Meier-Kolthoff,J.P., García-López,M., Mukherjee,S., Huntemann,M., Ivanova,N.N., Woyke,T., Kyrpides,N.C., Klenk,H.P., Göker,M. ( 2018 ) Corrigendum: Genome-Based Taxonomic Classification of Bacteroidetes Front Microbiol 9 :304.

https://www.ncbi.nlm.nih.gov/pubmed/29491863
2018 Pitt,A., Schmidt,J., Lang,E., Whitman,W.B., Woyke,T., Hahn,M.W. ( 2018 ) Polynucleobacter meluiroseus sp. nov., a bacterium isolated from a lake located in the mountains of the Mediterranean island of Corsica Int J Syst Evol Microbiol 68 (6) :1975-1985.

https://www.ncbi.nlm.nih.gov/pubmed/29688164
2018 Mohammadipanah,F., Atasayar,E., Heidarian,S., Wink,J. ( 2018 ) Glycomyces sediminimaris sp. nov., a new species of actinobacteria isolated from marine sediment Int J Syst Evol Microbiol 68 (7) :2357-2363.

https://www.ncbi.nlm.nih.gov/pubmed/29869980
2018 Huber,K.J., Overmann,J. ( 2018 ) Vicinamibacteraceae fam. nov., the first described family within the subdivision 6 Acidobacteria Int J Syst Evol Microbiol 68 (7) :2331-2334.

https://www.ncbi.nlm.nih.gov/pubmed/29809123
2018 Hahn,M.W., Koll,U., Schmidt,J., Huymann,L.R., Karbon,G., Lang,E. ( 2018 ) Polynucleobacter hirudinilacicola sp. nov. and Polynucleobacter campilacus sp. nov., both isolated from freshwater systems Int J Syst Evol Microbiol

https://www.ncbi.nlm.nih.gov/pubmed/29939120
2018 Hezbri,K., Nouioui,I., Rohde,M., Sproer,C., Schumann,P., Gtari,M., Klenk,H.P., Montero-Calasanz,M.D.C., Ghodhbane-Gtari,F. ( 2018 ) Blastococcus xanthinilyticus sp. nov., isolated from monument Int J Syst Evol Microbiol 68 (4) :1177-1183.

https://www.ncbi.nlm.nih.gov/pubmed/29458502
2018 Rohde,C., Resch,G., Pirnay,J.P., Blasdel,B.G., Debarbieux,L., Gelman,D., Gorski,A., Hazan,R., Huys,I., Kakabadze,E., Lobocka,M., Maestri,A., Almeida,G.M.F., Makalatia,K., Malik,D.J., Maslanova,I., Merabishvili,M., Pantucek,R., Rose,T., Stverakova,D., VanRaemdonck,H., Verbeken,G., Chanishvili,N. ( 2018 ) Expert Opinion on Three Phage Therapy Related Topics: Bacterial Phage Resistance, Phage Training and Prophages in Bacterial Production Strains Viruses 10 (4)

https://www.ncbi.nlm.nih.gov/pubmed/29621199
2018 Zecchin,S., Mueller,R.C., Seifert,J., Stingl,U., Anantharaman,K., vonBergen,M., Cavalca,L., Pester,M. ( 2018 ) Rice Paddy Nitrospirae Carry and Express Genes Related to Sulfate Respiration: Proposal of the New Genus "Candidatus Sulfobium" Applied and Environmental Microbiology 84 (5)

://WOS:000425012100012
2018 Yurkov,A.M. ( 2018 ) Yeasts of the soil - obscure but precious Yeast 35 (5) :369-378.

https://www.ncbi.nlm.nih.gov/pubmed/29365211
2018 Thomson,S.A., Pyle,R.L., Ahyong,S.T., Alonso-Zarazaga,M., Ammirati,J., Araya,J.F., Ascher,J.S., Audisio,T.L., Azevedo-Santos,V.M., Bailly,N., Baker,W.J., Balke,M., Barclay,M.V.L., Barrett,R.L., Benine,R.C., Bickerstaff,J.R.M., Bouchard,P., Bour,R., Bourgoin,T., Boyko,C.B., Breure,A.S.H., Brothers,D.J., Byng,J.W., Campbell,D., Ceriaco,L.M.P., Cernak,I., Cerretti,P., Chang,C.H., Cho,S., Copus,J.M., Costello,M.J., Cseh,A., Csuzdi,C., Culham,A., D'Elia,G., d'Udekemd'Acoz,C., Daneliya,M.E., Dekker,R., Dickinson,E.C., Dickinson,T.A., vanDijk,P.P., Dijkstra,K.B., Dima,B., Dmitriev,D.A., Duistermaat,L., Dumbacher,J.P., Eiserhardt,W.L., Ekrem,T., Evenhuis,N.L., Faille,A., Fernandez-Triana,J.L., Fiesler,E., Fishbein,M., Fordham,B.G., Freitas,A.V.L., Friol,N.R., Fritz,U., Froslev,T., Funk,V.A., Gaimari,S.D., Garbino,G.S.T., Garraffoni,A.R.S., Geml,J., Gill,A.C., Gray,A., Grazziotin,F.G., Greenslade,P., Gutierrez,E.E., Harvey,M.S., Hazevoet,C.J., He,K., He,X., Helfer,S., Helgen,K.M., vanHeteren,A.H., HitaGarcia,F., Holstein,N., Horvath,M.K., Hovenkamp,P.H., Hwang,W.S., Hyvonen,J., Islam,M.B., Iverson,J.B., Ivie,M.A., Jaafar,Z., Jackson,M.D., Jayat,J.P., Johnson,N.F., Kaiser,H., Klitgard,B.B., Knapp,D.G., Kojima,J.I., Koljalg,U., Kontschan,J., Krell,F.T., Krisai-Greilhuber,I., Kullander,S., Latella,L., Lattke,J.E., Lencioni,V., Lewis,G.P., Lhano,M.G., Lujan,N.K., Luksenburg,J.A., Mariaux,J., Marinho-Filho,J., Marshall,C.J., Mate,J.F., McDonough,M.M., Michel,E., Miranda,V.F.O., Mitroiu,M.D., Molinari,J., Monks,S., Moore,A.J., Moratelli,R., Muranyi,D., Nakano,T., Nikolaeva,S., Noyes,J., Ohl,M., Oleas,N.H., Orrell,T., Pall-Gergely,B., Pape,T., Papp,V., Parenti,L.R., Patterson,D., Pavlinov,I.Y., Pine,R.H., Poczai,P., Prado,J., Prathapan,D., Rabeler,R.K., Randall,J.E., Rheindt,F.E., Rhodin,A.G.J., Rodriguez,S.M., Rogers,D.C., Roque,F.O., Rowe,K.C., Ruedas,L.A., Salazar-Bravo,J., Salvador,R.B., Sangster,G., Sarmiento,C.E., Schigel,D.S., Schmidt,S., Schueler,F.W., Segers,H., Snow,N., Souza-Dias,P.G.B., Stals,R., Stenroos,S., Stone,R.D., Sturm,C.F., Stys,P., Teta,P., Thomas,D.C., Timm,R.M., Tindall,B.J., Todd,J.A., Triebel,D., Valdecasas,A.G., Vizzini,A., Vorontsova,M.S., deVos,J.M., Wagner,P., Watling,L., Weakley,A., Welter-Schultes,F., Whitmore,D., Wilding,N., Will,K., Williams,J., Wilson,K., Winston,J.E., Wuster,W., Yanega,D., Yeates,D.K., Zaher,H., Zhang,G., Zhang,Z.Q., Zhou,H.Z. ( 2018 ) Taxonomy based on science is necessary for global conservation PLoS Biol 16 (3) :e2005075.

https://www.ncbi.nlm.nih.gov/pubmed/29538381
2018 Spirin,V., Malysheva,V., Yurkov,A., Miettinen,O., Larsson,K.H. ( 2018 ) Studies in the Phaeotremella foliacea group (Tremellomycetes, Basidiomycota) Mycological Progress 17 (4) :451-466.

://WOS:000427507300004
2018 Schmidt,I.H.E., Gildhorn,C., Boning,M.A.L., Kulow,V.A., Steinmetz,I., Bast,A. ( 2018 ) Burkholderia pseudomallei modulates host iron homeostasis to facilitate iron availability and intracellular survival PLoS Negl Trop Dis 12 (1) :e0006096.

https://www.ncbi.nlm.nih.gov/pubmed/29329289
2018 Sybesma,W., Rohde,C., Bardy,P., Pirnay,J.P., Cooper,I., Caplin,J., Chanishvili,N., Coffey,A., DeVos,D., Scholz,A.H., McCallin,S., Puschner,H.M., Pantucek,R., Aminov,R., Doskar,J., Kurtbke,D.I. ( 2018 ) Silk Route to the Acceptance and Re-Implementation of Bacteriophage Therapy-Part II Antibiotics (Basel) 7 (2)

https://www.ncbi.nlm.nih.gov/pubmed/29690620
2018 Spring,S., Bunk,B., Sproer,C., Rohde,M., Klenk,H.P. ( 2018 ) Genome biology of a novel lineage of planctomycetes widespread in anoxic aquatic environments Environ Microbiol

https://www.ncbi.nlm.nih.gov/pubmed/29697183
2018 Adriaenssens,E.M., Wittmann,J., Kuhn,J.H., Turner,D., Sullivan,M.B., Dutilh,B.E., Jang,H.B., vanZyl,L.J., Klumpp,J., Lobocka,M., MorenoSwitt,A.I., Rumnieks,J., Edwards,R.A., Uchiyama,J., Alfenas-Zerbini,P., Petty,N.K., Kropinski,A.M., Barylski,J., Gillis,A., Clokie,M.R.C., Prangishvili,D., Lavigne,R., Aziz,R.K., Duffy,S., Krupovic,M., Poranen,M.M., Knezevic,P., Enault,F., Tong,Y., Oksanen,H.M., RodneyBrister,J. ( 2018 ) Taxonomy of prokaryotic viruses: 2017 update from the ICTV Bacterial and Archaeal Viruses Subcommittee Arch Virol 163 (4) :1125-1129.

https://www.ncbi.nlm.nih.gov/pubmed/29356990
2018 Kemter,F.S., Messerschmidt,S.J., Schallopp,N., Sobetzko,P., Lang,E., Bunk,B., Sproer,C., Teschler,J.K., Yildiz,F.H., Overmann,J., Waldminghaus,T. ( 2018 ) Synchronous termination of replication of the two chromosomes is an evolutionary selected feature in Vibrionaceae PLoS Genet 14 (3) :e1007251.

https://www.ncbi.nlm.nih.gov/pubmed/29505558
2017 Schumann,P., Pukall,R. ( 2017 ) Leucobacter weissii sp nov., an isolate from activated sludge once described as first representative of the peptidoglycan variation B2 delta, and emended description of the genus Leucobacter International Journal of Systematic and Evolutionary Microbiology 67 (12) :5244-5251.

://WOS:000417933700056
2017 Schmidt,I., Riedel,T., Schober,I., Bunk,B., Sproer,C., Bierbrodt,A., Lehnherr,H., Wittmann,J. ( 2017 ) Genome Sequence of Escherichia coli E28, a Multidrug-Resistant Strain Isolated from a Chicken Carcass, and Its Spontaneously Inducible Prophage Genome Announc 5 (22)

https://www.ncbi.nlm.nih.gov/pubmed/28572305
2017 Riedel,T., Wetzel,D., Hofmann,J.D., Plorin,S., Dannheim,H., Berges,M., Zimmermann,O., Bunk,B., Schober,I., Sproer,C., Liesegang,H., Jahn,D., Overmann,J., Gross,U., Neumann-Schaal,M. ( 2017 ) High metabolic versatility of different toxigenic and non-toxigenic Clostridioides difficile isolates Int J Med Microbiol 307 (6) :311-320.

https://www.ncbi.nlm.nih.gov/pubmed/28619474
2017 Panschin,I., Becher,M., Verbarg,S., Sproer,C., Rohde,M., Schuler,M., Amann,R.I., Harder,J., Tindall,B.J., Hahnke,R.L. ( 2017 ) Description of Gramella forsetii sp nov., a marine Flavobacteriaceae isolated from North Sea water, and emended description of Gramella gaetbulicola Cho et al. 2011 International Journal of Systematic and Evolutionary Microbiology 67 (3) :697-703.

://WOS:000399232900028
2017 Choi,D.H., Jang,G.I., Lapidus,A., Copeland,A., Reddy,T.B.K., Mukherjee,S., Huntemann,M., Varghese,N., Ivanova,N., Pillay,M., Tindall,B.J., Goker,M., Woyke,T., Klenk,H.P., Kyrpides,N.C., Cho,B.C. ( 2017 ) Draft genome sequence of Marinobacterium rhizophilum CL-YJ9(T) (DSM 18822(T)), isolated from the rhizosphere of the coastal tidal-flat plant Suaeda japonica Stand Genomic Sci 12 :65.

https://www.ncbi.nlm.nih.gov/pubmed/29093768
2017 ChaabaneChaouch,F., Bouras,N., Mokrane,S., Bouznada,K., Zitouni,A., Potter,G., Sproer,C., Klenk,H.P., Sabaou,N. ( 2017 ) Planomonospora algeriensis sp. nov., an actinobacterium isolated from a Saharan soil of Algeria Antonie Van Leeuwenhoek 110 (2) :245-252.

https://www.ncbi.nlm.nih.gov/pubmed/27803992
2017 Tancsics,A., Mathe,I., Benedek,T., Toth,E.M., Atasayar,E., Sproer,C., Marialigeti,K., Felfoldi,T., Kriszt,B. ( 2017 ) Rhodococcus sovatensis sp. nov., an actinomycete isolated from the hypersaline and heliothermal Lake Ursu Int J Syst Evol Microbiol 67 (2) :190-196.

https://www.ncbi.nlm.nih.gov/pubmed/27902266
2017 Hahn,M.W., Huymann,L.R., Koll,U., Schmidt,J., Lang,E., Hoetzinger,M. ( 2017 ) Polynucleobacter wuianus sp. nov., a free-living freshwater bacterium affiliated with the cryptic species complex PnecC Int J Syst Evol Microbiol 67 (2) :379-385.

https://www.ncbi.nlm.nih.gov/pubmed/27902302
2017 Hahn,M.W., Karbon,G., Koll,U., Schmidt,J., Lang,E. ( 2017 ) Polynucleobacter sphagniphilus sp. nov. a planktonic freshwater bacterium isolated from an acidic and humic freshwater habitat Int J Syst Evol Microbiol 67 (9) :3261-3267.

https://www.ncbi.nlm.nih.gov/pubmed/28829016
2017 Hahn,M.W., Koll,U., Karbon,G., Schmidt,J., Lang,E. ( 2017 ) Polynucleobacter aenigmaticus sp. nov. isolated from the permanently anoxic monimolimnion of a temperate meromictic lake Int J Syst Evol Microbiol 67 (11) :4646-4654.

https://www.ncbi.nlm.nih.gov/pubmed/29022553
2017 Nouioui,I., Carro,L., Teramoto,K., Igual,J.M., Jando,M., Montero-Calasanz,M.D., Sutcliffe,I., Sangal,V., Goodfellow,M., Klenk,H.P. ( 2017 ) Mycobacterium eburneum sp nov., a non-chromogenic, fast-growing strain isolated from sputum International Journal of Systematic and Evolutionary Microbiology 67 (9) :3174-3181.

://WOS:000417836100006
2017 Nouioui,I., Sangal,V., Carro,L., Teramoto,K., Jando,M., Montero-Calasanz,M.D., Igual,J.M., Sutcliffe,I., Goodfellow,M., Klenk,H.P. ( 2017 ) Two novel species of rapidly growing mycobacteria: Mycobacterium lehmannii sp nov and Mycobacterium neumannii sp nov. International Journal of Systematic and Evolutionary Microbiology 67 (12) :4948-4955.

://WOS:000417933700011
2017 Pereira,P.H.F., Macrae,A., Reinert,F., deSouza,R.F., Coelho,R.R.R., Potter,G., Klenk,H.P., Labeda,D.P. ( 2017 ) Streptomyces odonnellii sp nov., a proteolytic streptomycete isolated from soil under cerrado (savanna) vegetation cover International Journal of Systematic and Evolutionary Microbiology 67 (12) :5211-5215.

://WOS:000417933700051
2017 Tindall,B.J. ( 2017 ) The consequences of Bacillus axarquiensis Ruiz-Garcia et al. 2005, Bacillus malacitensis Ruiz-Garcia et al. 2005 and Brevibacterium halotolerans Delaporte and Sasson 1967 (Approved Lists 1980) being treated as heterotypic synonyms International Journal of Systematic and Evolutionary Microbiology 67 (1) :175-176.

://WOS:000396035500031
2017 Tindall,B.J., Sutton,G., Garrity,G.M. ( 2017 ) Enterobacter aerogenes Hormaeche and Edwards 1960 (Approved Lists 1980) and Klebsiella mobilis Bascomb et al. 1971 (Approved Lists 1980) share the same nomenclatural type (ATCC 13048) on the Approved Lists and are homotypic synonyms, with consequences for the name Klebsiella mobilis Bascomb et al. 1971 (Approved Lists 1980) International Journal of Systematic and Evolutionary Microbiology 67 (2) :502-504.

://WOS:000397002800051
2017 Tindall,B.J. ( 2017 ) Clarifying the limitations on Rule 18a and Rule 30 of the International Code of Nomenclature of Prokaryotes International Journal of Systematic and Evolutionary Microbiology 67 (2) :505-506.

://WOS:000397002800052
2017 Hahn,M.W., Schmidt,J., Koll,U., Rohde,M., Verbarg,S., Pitt,A., Nakai,R., Naganuma,T., Lang,E. ( 2017 ) Silvanigrella aquatica gen. nov., sp nov., isolated from a freshwater lake, description of Silvanigrellaceae fam. nov and Silvanigrellales ord. nov., reclassification of the order Bdellovibrionales in the class Oligoflexia, reclassification of the families Bacteriovoracaceae and Halobacteriovoraceae in the new order Bacteriovoracales ord. nov., and reclassification of the family Pseudobacteriovoracaceae in the order Oligoflexales International Journal of Systematic and Evolutionary Microbiology 67 (8) :2555-2568.

://WOS:000409533100010
2017 Huber,K.J., Geppert,A.M., Gross,U., Luckner,M., Wanner,G., Cooper,P., Abakah,J., Janssen,I., Overmann,J. ( 2017 ) Aridibacter nitratireducens sp nov., a member of the family Blastocatellaceae, class Blastocatellia, isolated from an African soil International Journal of Systematic and Evolutionary Microbiology 67 (11) :4487-4493.

://WOS:000414976000031
2017 Wink,J., Schumann,P., Atasayar,E., Klenk,H.P., Zaburannyi,N., Westermann,M., Martin,K., Glaeser,S.P., Kampfer,P. ( 2017 ) 'Streptomyces caelicus', an antibiotic-producing species of the genus Streptomyces, and Streptomyces canchipurensis Li et al. 2015 are later heterotypic synonyms of Streptomyces muensis Ningthoujam et al. 2014 International Journal of Systematic and Evolutionary Microbiology 67 (3) :548-556.

://WOS:000399232900004
2017 Rottig,A., Atasayar,E., Meier-Kolthoff,J.P., Sproer,C., Schumann,P., Schauer,J., Steinbuchel,A. ( 2017 ) Streptomyces jeddahensis sp nov., an oleaginous bacterium isolated from desert soil International Journal of Systematic and Evolutionary Microbiology 67 (6) :1676-1682.

://WOS:000405503800010
2017 Atasayar,E., Zimmermann,O., Sproer,C., Schumann,P., Gross,U. ( 2017 ) Corynebacterium gottingense sp nov., isolated from a clinical patient International Journal of Systematic and Evolutionary Microbiology 67 (11) :4494-4499.

://WOS:000414976000032
2017 Koskinen,K., Rettberg,P., Pukall,R., Auerbach,A., Wink,L., Barczyk,S., Perras,A., Mahnert,A., Margheritis,D., Kminek,G., Moissl-Eichinger,C. ( 2017 ) Microbial biodiversity assessment of the European Space Agency's ExoMars 2016 mission Microbiome 5 (1) :143.

https://www.ncbi.nlm.nih.gov/pubmed/29070062
2017 Herbold,C.W., Lehtovirta-Morley,L.E., Jung,M.Y., Jehmlich,N., Hausmann,B., Han,P., Loy,A., Pester,M., Sayavedra-Soto,L.A., Rhee,S.K., Prosser,J.I., Nicol,G.W., Wagner,M., Gubry-Rangin,C. ( 2017 ) Ammonia-oxidising archaea living at low pH: Insights from comparative genomics Environ Microbiol 19 (12) :4939-4952.

https://www.ncbi.nlm.nih.gov/pubmed/29098760
2017 Beblo-Vranesevic,K., Bohmeier,M., Perras,A.K., Schwendner,P., Rabbow,E., Moissl-Eichinger,C., Cockell,C.S., Pukall,R., Vannier,P., Marteinsson,V.T., Monaghan,E.P., Ehrenfreund,P., Garcia-Descalzo,L., Gomez,F., Malki,M., Amils,R., Gaboyer,F., Westall,F., Cabezas,P., Walter,N., Rettberg,P. ( 2017 ) The responses of an anaerobic microorganism, Yersinia intermedia MASE-LG-1 to individual and combined simulated Martian stresses PLoS One 12 (10) :e0185178.

https://www.ncbi.nlm.nih.gov/pubmed/29069099
2017 Avci,B., Hahnke,R.L., Chafee,M., Fischer,T., Gruber-Vodicka,H., Tegetmeyer,H.E., Harder,J., Fuchs,B.M., Amann,R.I., Teeling,H. ( 2017 ) Genomic and physiological analyses of 'Reinekea forsetii' reveal a versatile opportunistic lifestyle during spring algae blooms Environ Microbiol 19 (3) :1209-1221.

https://www.ncbi.nlm.nih.gov/pubmed/28000419
2017 Adriaenssens,E.M., Krupovic,M., Knezevic,P., Ackermann,H.W., Barylski,J., Brister,J.R., Clokie,M.R., Duffy,S., Dutilh,B.E., Edwards,R.A., Enault,F., Jang,H.B., Klumpp,J., Kropinski,A.M., Lavigne,R., Poranen,M.M., Prangishvili,D., Rumnieks,J., Sullivan,M.B., Wittmann,J., Oksanen,H.M., Gillis,A., Kuhn,J.H. ( 2017 ) Taxonomy of prokaryotic viruses: 2016 update from the ICTV bacterial and archaeal viruses subcommittee Arch Virol 162 (4) :1153-1157.

https://www.ncbi.nlm.nih.gov/pubmed/28040838
2017 Schulz,M., Sicker,D., Schackow,O., Hennig,L., Yurkov,A., Siebers,M., Hofmann,D., Disko,U., Ganimede,C., Mondani,L., Tabaglio,V., Marocco,A. ( 2017 ) Interspecies-cooperations of abutilon theophrasti with root colonizing microorganisms disarm BOA-OH allelochemicals Plant Signaling & Behavior 12 (8)

://WOS:000428142500015
2017 Brasch,J., Beck-Jendroscheck,V., Voss,K., Yurkov,A., Stchigel,A.M., Graser,Y. ( 2017 ) Xanthothecium peruvianum isolated from human stratum corneum: A case report, characterisation and short review that suggest emendation of Arachnomyces peruvianus Mycoses 60 (7) :469-476.

://WOS:000403324200008
2017 Caton,L., Yurkov,A., Giesbers,M., Dijksterhuis,J., Ingham,C.J. ( 2017 ) Physically Triggered Morphology Changes in a Novel Acremonium Isolate Cultivated in Precisely Engineered Microfabricated Environments Frontiers in Microbiology 8

://WOS:000406157700002
2017 Pontes,A., Rohl,A., MaLdonado,C., Yurkov,A.M., Sampaio,J.P. ( 2017 ) Cryptotrichosporon argae sp nov., Cryptotrichosporon brontae sp nov and Cryptotrichosporon steropae sp nov., isolated from forest soils International Journal of Systematic and Evolutionary Microbiology 67 (9) :3610-3614.

://WOS:000417836100079
2017 Wijayawardene,N.N., Hyde,K.D., Rajeshkumar,K.C., Hawksworth,D.L., Madrid,H., Kirk,P.M., Braun,U., Singh,R.V., Crous,P.W., Kukwa,M., Lucking,R., Kurtzman,C.P., Yurkov,A., Haelewaters,D., Aptroot,A., Lumbsch,H.T., Timdal,E., Ertz,D., Etayo,J., Phillips,A.J.L., Groenewald,J.Z., Papizadeh,M., Selbmann,L., Dayarathne,M.C., Weerakoon,G., Jones,E.B.G., Suetrong,S., Tian,Q., Castaneda-Ruiz,R.F., Bahkali,A.H., Pang,K.L., Tanaka,K., Dai,D.Q., Sakayaroj,J., Hujslova,M., Lombard,L., Shenoy,B.D., Suija,A., Maharachchikumbura,S.S.N., Thambugala,K.M., Wanasinghe,D.N., Sharma,B.O., Gaikwad,S., Pandit,G., Zucconi,L., Onofri,S., Egidi,E., Raja,H.A., Kodsueb,R., Caceres,M.E.S., Perez-Ortega,S., Fiuza,P.O., Monteiro,J.S., Vasilyeva,L.N., Shivas,R.G., Prieto,M., Wedin,M., Olariaga,I., Lateef,A.A., Agrawal,Y., Fazeli,S.A.S., Amoozegar,M.A., Zhao,G.Z., Pfliegler,W.P., Sharma,G., Oset,M., Abdel-Wahab,M.A., Takamatsu,S., Bensch,K., deSilva,N.I., DeKesel,A., Karunarathna,A., Boonmee,S., Pfister,D.H., Lu,Y.Z., Luo,Z.L., Boonyuen,N., Daranagama,D.A., Senanayake,I.C., Jayasiri,S.C., Samarakoon,M.C., Zeng,X.Y., Doilom,M., Quijada,L., Rampadarath,S., Heredia,G., Dissanayake,A.J., Jayawardana,R.S., Perera,R.H., Tang,L.Z., Phukhamsakda,C., Hernandez-Restrepo,M., Ma,X.Y., Tibpromma,S., Gusmao,L.F.P., Weerahewa,D., Karunarathna,S.C. ( 2017 ) Notes for genera: Ascomycota Fungal Diversity 86 (1) :1-594.

://WOS:000413448200001
2017 Yurkov,A.M., Dauchy,D., Peter,G. ( 2017 ) Meyerozyma amylolytica sp nov from temperate deciduous trees and the transfer of five Candida species to the genus Meyerozyma International Journal of Systematic and Evolutionary Microbiology 67 (10) :3977-3981.

://WOS:000413484800045
2017 Nasr,S., Mohammadimehr,M., Vaghei,M.G., Amoozegar,M.A., Fazeli,S.A.S., Yurkov,A. ( 2017 ) Jaminaea pallidilutea sp nov (Microstromatales), a basidiomycetous yeast isolated from plant material of mangrove forests in Iran International Journal of Systematic and Evolutionary Microbiology 67 (11) :4405-4408.

://WOS:000414976000018
2017 Rast,P., Glockner,I., Boedeker,C., Jeske,O., Wiegand,S., Reinhardt,R., Schumann,P., Rohde,M., Spring,S., Glockner,F.O., Jogler,C., Jogler,M. ( 2017 ) Three Novel Species with Peptidoglycan Cell Walls form the New Genus Lacunisphaera gen. nov. in the Family Opitutaceae of the Verrucomicrobial Subdivision 4 Front Microbiol 8 :202.

https://www.ncbi.nlm.nih.gov/pubmed/28243229
2017 Riedl,S., Brown,R.K., Klockner,S., Huber,K.J., Bunk,B., Overmann,J., Schroder,U. ( 2017 ) Successive Conditioning in Complex Artificial Wastewater Increases the Performance of Electrochemically Active Biofilms Treating Real Wastewater Chemelectrochem 4 (12) :3081-3090.

://WOS:000419269000009
2017 Stackebrandt,E., Smith,D. ( 2017 ) Expanding the 'Digital Protologue' database (DPD) to 'Archives of Microbiology': an offer to scientists and science Arch Microbiol 199 (4) :519-520.

https://www.ncbi.nlm.nih.gov/pubmed/28343315
2017 BenHania,W., Joseph,M., Bunk,B., Sproer,C., Klenk,H.P., Fardeau,M.L., Spring,S. ( 2017 ) Characterization of the first cultured representative of a Bacteroidetes clade specialized on the scavenging of cyanobacteria Environ Microbiol 19 (3) :1134-1148.

https://www.ncbi.nlm.nih.gov/pubmed/27943642
2017 Riedel,T., Wittmann,J., Bunk,B., Schober,I., Sproer,C., Gronow,S., Overmann,J. ( 2017 ) A Clostridioides difficile bacteriophage genome encodes functional binary toxin-associated genes J Biotechnol 250 :23-28.

https://www.ncbi.nlm.nih.gov/pubmed/28216103
2017 Dreiseikelmann,B., Bunk,B., Sproer,C., Rohde,M., Nimtz,M., Wittmann,J. ( 2017 ) Characterization and genome comparisons of three Achromobacter phages of the family Siphoviridae Arch Virol 162 (8) :2191-2201.

https://www.ncbi.nlm.nih.gov/pubmed/28357512
2017 Dannheim,H., Riedel,T., Neumann-Schaal,M., Bunk,B., Schober,I., Sproer,C., Chibani,C.M., Gronow,S., Liesegang,H., Overmann,J., Schomburg,D. ( 2017 ) Manual curation and reannotation of the genomes of Clostridium difficile 630Deltaerm and C. difficile 630 J Med Microbiol 66 (3) :286-293.

https://www.ncbi.nlm.nih.gov/pubmed/28357980
2017 Garzetti,D., Brugiroux,S., Bunk,B., Pukall,R., McCoy,K.D., Macpherson,A.J., Stecher,B. ( 2017 ) High-Quality Whole-Genome Sequences of the Oligo-Mouse-Microbiota Bacterial Community Genome Announc 5 (42)

https://www.ncbi.nlm.nih.gov/pubmed/29051233
2017 Birkeland,N.K., Schonheit,P., Poghosyan,L., Fiebig,A., Klenk,H.P. ( 2017 ) Complete genome sequence analysis of Archaeoglobus fulgidus strain 7324 (DSM 8774), a hyperthermophilic archaeal sulfate reducer from a North Sea oil field Stand Genomic Sci 12 :79.

https://www.ncbi.nlm.nih.gov/pubmed/29270248
2017 Matrosova,V.Y., Gaidamakova,E.K., Makarova,K.S., Grichenko,O., Klimenkova,P., Volpe,R.P., Tkavc,R., Ertem,G., Conze,I.H., Brambilla,E., Huntemann,M., Clum,A., Pillay,M., Palaniappan,K., Varghese,N., Mikhailova,N., Stamatis,D., Reddy,T., Daum,C., Shapiro,N., Ivanova,N., Kyrpides,N., Woyke,T., Daligault,H., Davenport,K., Erkkila,T., Goodwin,L.A., Gu,W., Munk,C., Teshima,H., Xu,Y., Chain,P., Woolbert,M., Gunde-Cimerman,N., Wolf,Y.I., Grebenc,T., Gostincar,C., Daly,M.J. ( 2017 ) High-quality genome sequence of the radioresistant bacterium Deinococcus ficus KS 0460 Stand Genomic Sci 12 :46.

https://www.ncbi.nlm.nih.gov/pubmed/28775794
2016 Tashkandy,N., Sabban,S., Fakieh,M., Meier-Kolthoff,J.P., Huang,S., Tindall,B.J., Rohde,M., Baeshen,M.N., Baeshen,N.A., Lapidus,A., Copeland,A., Pillay,M., Reddy,T.B., Huntemann,M., Pati,A., Ivanova,N., Markowitz,V., Woyke,T., Goker,M., Klenk,H.P., Kyrpides,N.C., Hahnke,R.L. ( 2016 ) High-quality draft genome sequence of Flavobacterium suncheonense GH29-5(T) (DSM 17707(T)) isolated from greenhouse soil in South Korea, and emended description of Flavobacterium suncheonense GH29-5(T) Stand Genomic Sci 11 :42.

https://www.ncbi.nlm.nih.gov/pubmed/27313837
2016 Ozdemir-Kocak,F., Saygin,H., Saricaoglu,S., Cetin,D., Potter,G., Sproer,C., Guven,K., Isik,K., Klenk,H.P., Sahin,N. ( 2016 ) Nocardia zapadnayensis sp nov., isolated from soil Antonie Van Leeuwenhoek International Journal of General and Molecular Microbiology 109 (1) :95-103.

://WOS:000368018200009
2016 Louie,T.S., Giovannelli,D., Yee,N., Narasingarao,P., Starovoytov,V., Goker,M., Klenk,H.P., Lang,E., Kyrpides,N.C., Woyke,T., Bini,E., Haggblom,M.M. ( 2016 ) High-quality draft genome sequence of Sedimenticola selenatireducens strain AK4OH1(T), a gammaproteobacterium isolated from estuarine sediment Stand Genomic Sci 11 :66.

https://www.ncbi.nlm.nih.gov/pubmed/27721915
2016 Hahnke,R.L., Meier-Kolthoff,J.P., Garcia-Lopez,M., Mukherjee,S., Huntemann,M., Ivanova,N.N., Woyke,T., Kyrpides,N.C., Klenk,H.P., Goker,M. ( 2016 ) Genome-Based Taxonomic Classification of Bacteroidetes Front Microbiol 7 :2003.

https://www.ncbi.nlm.nih.gov/pubmed/28066339
2016 Brugiroux,S., Beutler,M., Pfann,C., Garzetti,D., Ruscheweyh,H.J., Ring,D., Diehl,M., Herp,S., Lotscher,Y., Hussain,S., Bunk,B., Pukall,R., Huson,D.H., Munch,P.C., McHardy,A.C., McCoy,K.D., Macpherson,A.J., Loy,A., Clavel,T., Berry,D., Stecher,B. ( 2016 ) Genome-guided design of a defined mouse microbiota that confers colonization resistance against Salmonella enterica serovar Typhimurium Nat Microbiol 2 :16215.

https://www.ncbi.nlm.nih.gov/pubmed/27869789
2016 Gomez-Consarnau,L., Gonzalez,J.M., Riedel,T., Jaenicke,S., Wagner-Dobler,I., Sanudo-Wilhelmy,S.A., Fuhrman,J.A. ( 2016 ) Proteorhodopsin light-enhanced growth linked to vitamin-B1 acquisition in marine Flavobacteria ISME J 10 (5) :1102-12.

https://www.ncbi.nlm.nih.gov/pubmed/26574687
2016 Panschin,I., Huang,S., Meier-Kolthoff,J.P., Tindall,B.J., Rohde,M., Verbarg,S., Lapidus,A., Han,J., Trong,S., Haynes,M., Reddy,T.B., Huntemann,M., Pati,A., Ivanova,N.N., Mavromatis,K., Markowitz,V., Woyke,T., Goker,M., Klenk,H.P., Kyrpides,N.C., Hahnke,R.L. ( 2016 ) Comparing polysaccharide decomposition between the type strains Gramella echinicola KMM 6050(T) (DSM 19838(T)) and Gramella portivictoriae UST040801-001(T) (DSM 23547(T)), and emended description of Gramella echinicola Nedashkovskaya et al. 2005 emend. Shahina et al. 2014 and Gramella portivictoriae Lau et al. 2005 Stand Genomic Sci 11 :37.

https://www.ncbi.nlm.nih.gov/pubmed/27274783
2016 Tindall,B.J. ( 2016 ) What does Rule 18c of the International Code of Nomenclature of Bacteria really say? Int J Syst Evol Microbiol 66 (9) :3622-3624.

https://www.ncbi.nlm.nih.gov/pubmed/27307221
2016 Tindall,B.J. ( 2016 ) Limiting the retroactive effects of the note to Rule 61 of the International Code of Nomenclature of Bacteria Int J Syst Evol Microbiol 66 (9) :3619-3621.

https://www.ncbi.nlm.nih.gov/pubmed/27307285
2016 Tindall,B.J. ( 2016 ) Priority of the genus name Clostridium Prazmowski 1880 (Approved Lists 1980) vs Sarcina Goodsir 1842 (Approved Lists 1980) and the creation of the illegitimate combinations Clostridium maximum (Lindner 1888) Lawson and Rainey 2016 and Clostridium ventriculi (Goodsir 1842) Lawson and Rainey 2016 that may not be used Int J Syst Evol Microbiol 66 (11) :4890-4894.

https://www.ncbi.nlm.nih.gov/pubmed/27488356
2016 Tindall,B.J. ( 2016 ) The undesirable retroactive changes to Rule 8 of the International Code of Nomenclature of Prokaryotes Int J Syst Evol Microbiol 66 (11) :4895-4896.

https://www.ncbi.nlm.nih.gov/pubmed/27488867
2016 Tindall,B.J. ( 2016 ) Rule 27 of the International Code of Nomenclature of prokaryotes: the basonym is not enough Int J Syst Evol Microbiol 66 (11) :4897-4899.

https://www.ncbi.nlm.nih.gov/pubmed/27488906
2016 Tindall,B.J. ( 2016 ) The nomenclatural type of the genus Methanocorpusculum Zellner et al. 1988 and the selection of the correct name Int J Syst Evol Microbiol 66 (11) :4900-4904.

https://www.ncbi.nlm.nih.gov/pubmed/27499051
2016 Tindall,B.J. ( 2016 ) The relationship of validly published names to legitimate and illegitimate names in the International Code of Nomenclature of Prokaryotes Int J Syst Evol Microbiol 66 (11) :4905-4906.

https://www.ncbi.nlm.nih.gov/pubmed/27520843
2016 Tindall,B.J. ( 2016 ) Are Rules 20d and 20e of the International Code of Nomenclature of Prokaryotes superfluous? Int J Syst Evol Microbiol 66 (11) :4907-4909.

https://www.ncbi.nlm.nih.gov/pubmed/27528235
2016 Tindall,B.J. ( 2016 ) On the synonymy of Edwardsiellatarda Ewing and McWhorter 1965 (Approved Lists 1980) and Edwardsiellaanguillimortifera (Hoshina 1962) Sakazaki and Tamura 1975 (Approved Lists 1980), an old problem in need of a solution Int J Syst Evol Microbiol 66 (11) :4910-4912.

https://www.ncbi.nlm.nih.gov/pubmed/27539016
2016 Tindall,B.J. ( 2016 ) The wording and examples given in Rule 47a of the International Code of Nomenclature of Prokaryotes are misleading Int J Syst Evol Microbiol 66 (11) :4913-4914.

https://www.ncbi.nlm.nih.gov/pubmed/27553429
2016 Tindall,B.J. ( 2016 ) Redefining homonyms under Rule 51b (4) of the International Code of Nomenclature of Prokaryotes Int J Syst Evol Microbiol 66 (12) :5618-5619.

https://www.ncbi.nlm.nih.gov/pubmed/27707432
2016 Pontes,A., Rohl,O., Carvalho,C., Maldonado,C., Yurkov,A.M., PauloSampaio,J. ( 2016 ) Cystofilobasidium intermedium sp. nov. and Cystofilobasidium alribaticum f.a. sp. nov., isolated from Mediterranean forest soils Int J Syst Evol Microbiol 66 (2) :1058-1062.

https://www.ncbi.nlm.nih.gov/pubmed/26652027
2016 Handel,S., Wang,T., Yurkov,A.M., Konig,H. ( 2016 ) Sugiyamaella mastotermitis sp. nov. and Papiliotrema odontotermitis f.a., sp. nov. from the gut of the termites Mastotermes darwiniensis and Odontotermes obesus Int J Syst Evol Microbiol 66 (11) :4600-4608.

https://www.ncbi.nlm.nih.gov/pubmed/27514386
2016 Hahn,M.W., Schmidt,J., Pitt,A., Taipale,S.J., Lang,E. ( 2016 ) Reclassification of four Polynucleobacter necessarius strains as representatives of Polynucleobacter asymbioticus comb. nov., Polynucleobacter duraquae sp. nov., Polynucleobacter yangtzensis sp. nov. and Polynucleobacter sinensis sp. nov., and emended description of Polynucleobacter necessarius Int J Syst Evol Microbiol 66 (8) :2883-92.

https://www.ncbi.nlm.nih.gov/pubmed/27064460
2016 Bouznada,K., Bouras,N., Mokrane,S., ChaabaneChaouch,F., Zitouni,A., Potter,G., Sproer,C., Klenk,H.P., Sabaou,N. ( 2016 ) Saccharothrix isguenensis sp. nov., an actinobacterium isolated from desert soil Int J Syst Evol Microbiol 66 (11) :4785-4790.

https://www.ncbi.nlm.nih.gov/pubmed/27535702
2016 Mittelbach,M., Yurkov,A.M., Stoll,R., Begerow,D. ( 2016 ) Inoculation order of nectar-borne yeasts opens a door for transient species and changes nectar rewarded to pollinators Fungal Ecology 22 :90-97.

://WOS:000379630100012
2016 Krupovic,M., Dutilh,B.E., Adriaenssens,E.M., Wittmann,J., Vogensen,F.K., Sullivan,M.B., Rumnieks,J., Prangishvili,D., Lavigne,R., Kropinski,A.M., Klumpp,J., Gillis,A., Enault,F., Edwards,R.A., Duffy,S., Clokie,M.R., Barylski,J., Ackermann,H.W., Kuhn,J.H. ( 2016 ) Taxonomy of prokaryotic viruses: update from the ICTV bacterial and archaeal viruses subcommittee Arch Virol 161 (4) :1095-9.

https://www.ncbi.nlm.nih.gov/pubmed/26733293
2016 Debarbieux,L., Pirnay,J.P., Verbeken,G., DeVos,D., Merabishvili,M., Huys,I., Patey,O., Schoonjans,D., Vaneechoutte,M., Zizi,M., Rohde,C. ( 2016 ) A bacteriophage journey at the European Medicines Agency Fems Microbiology Letters 363 (2)

://WOS:000377304600004
2016 Ercibengoa,M., Bell,M., Marimom,J.M., Humrighouse,B., Klenk,H.P., Potter,G., Perez-Trallero,E. ( 2016 ) Nocardia donostiensis sp nov., isolated from human respiratory specimens Antonie Van Leeuwenhoek International Journal of General and Molecular Microbiology 109 (5) :653-660.

://WOS:000374110800005
2016 Rameshkumar,N., Lang,E., Tanaka,N. ( 2016 ) Description of Vogesella oryzae sp nov., isolated from the rhizosphere of saline tolerant pokkali rice Systematic and Applied Microbiology 39 (1) :20-24.

://WOS:000370915000004
2016 Yurkov,A.M., Wehde,T., Federici,J., Schafer,A.M., Ebinghaus,M., Lotze-Engelhard,S., Mittelbach,M., Prior,R., Richter,C., Rohl,O., Begerow,D. ( 2016 ) Yeast diversity and species recovery rates from beech forest soils Mycological Progress 15 (8) :845-859.

://WOS:000384335100004
2016 Boundy-Mills,K.L., Glantschnig,E., Roberts,I.N., Yurkov,A., Casaregola,S., Daniel,H.M., Groenewald,M., Turchetti,B. ( 2016 ) Yeast culture collections in the twenty-first century: new opportunities and challenges Yeast 33 (7) :243-60.

https://www.ncbi.nlm.nih.gov/pubmed/27144478
2016 Expertroundtableon,a., re-implementationofbacteriophage,t. ( 2016 ) Silk route to the acceptance and re-implementation of bacteriophage therapy Biotechnol J 11 (5) :595-600.

https://www.ncbi.nlm.nih.gov/pubmed/27008250
2016 Spring,S., Bunk,B., Sproer,C., Schumann,P., Rohde,M., Tindall,B.J., Klenk,H.P. ( 2016 ) Characterization of the first cultured representative of Verrucomicrobia subdivision 5 indicates the proposal of a novel phylum ISME J 10 (12) :2801-2816.

https://www.ncbi.nlm.nih.gov/pubmed/27300277
2016 Antunes,A., Stackebrandt,E., Lima,N. ( 2016 ) Fueling the Bio-economy: European Culture Collections and Microbiology Education and Training Trends Microbiol 24 (2) :77-79.

https://www.ncbi.nlm.nih.gov/pubmed/26727416
2016 Doijad,S., Imirzalioglu,C., Yao,Y., Pati,N.B., Falgenhauer,L., Hain,T., Foesel,B.U., Abt,B., Overmann,J., Mirambo,M.M., Mshana,S.E., Chakraborty,T. ( 2016 ) Enterobacter bugandensis sp. nov., isolated from neonatal blood International Journal of Systematic and Evolutionary Microbiology 66 (2) :968-974.

http://ijs.microbiologyresearch.org/content/journal/ijsem/10.1099/ijsem.0.000821
2016 Lagkouvardos,I., Pukall,R., Abt,B., Foesel,B.U., Meier-Kolthoff,J.P., Kumar,N., Bresciani,A., Martínez,I., Just,S., Ziegler,C., Brugiroux,S., Garzetti,D., Wenning,M., Bui,T.P.N., Wang,J., Hugenholtz,F., Plugge,C.M., Peterson,D.A., Hornef,M.W., Baines,J.F., Smidt,H., Walter,J., Kristiansen,K., Nielsen,H.B., Haller,D., Overmann,J., Stecher,B., Clavel,T. ( 2016 ) The Mouse Intestinal Bacterial Collection (miBC) provides host-specific insight into cultured diversity and functional potential of the gut microbiota Nature Microbiology 1 :16131.

http://dx.doi.org/10.1038/nmicrobiol.2016.131
2016 Foesel,B.U., Mayer,S., Luckner,M., Wanner,G., Rohde,M., Overmann,J. ( 2016 ) Occallatibacter riparius gen. nov., sp. nov. and Occallatibacter savannae sp. nov., acidobacteria isolated from Namibian soils, and emended description of the family Acidobacteriaceae International Journal of Systematic and Evolutionary Microbiology 66 (1) :219-229.

http://ijs.microbiologyresearch.org/content/journal/ijsem/10.1099/ijsem.0.000700
2016 Foesel,B.U., Geppert,A., Rohde,M., Overmann,J. ( 2016 ) Parviterribacter kavangonensis gen. nov., sp. nov. and Parviterribacter multiflagellatus sp. nov., novel members of Parviterribacteraceae fam. nov. within the order Solirubrobacterales, and emended descriptions of the classes Thermoleophilia and Rubrobacteria and their orders and families International Journal of Systematic and Evolutionary Microbiology 66 (2) :652-665.

http://ijs.microbiologyresearch.org/content/journal/ijsem/10.1099/ijsem.0.000770
2016 Wüst,P.K., Foesel,B.U., Geppert,A., Huber,K.J., Luckner,M., Wanner,G., Overmann,J. ( 2016 ) Brevitalea aridisoli, B. deliciosa, and Arenimicrobium luteum, three novel species of Acidobacteria subdivision 4 (class Blastocatellia) isolated from Namibian savanna soil and description of the novel family Pyrinomonadaceae Int J Syst Evol Microbiol

2016 Yurkov,A.M., Rohl,O., Pontes,A., Carvalho,C., Maldonado,C., Sampaio,J.P. ( 2016 ) Local climatic conditions constrain soil yeast diversity patterns in Mediterranean forests, woodlands and scrub biome FEMS Yeast Res 16 (1)

http://www.ncbi.nlm.nih.gov/pubmed/26568202
2015 Yurkov,A., Inacio,J., Chernov,I.Y., Fonseca,A. ( 2015 ) Yeast biogeography and the effects of species recognition approaches: the case study of widespread basidiomycetous species from birch forests in Russia Curr Microbiol 70 (4) :587-601.

http://www.ncbi.nlm.nih.gov/pubmed/25527366
2015 Yurkov,A., Guerreiro,M.A., Sharma,L., Carvalho,C., Fonseca,A. ( 2015 ) Correction: Multigene Assessment of the Species Boundaries and Sexual Status of the Basidiomycetous Yeasts Cryptococcus flavescens and C. terrestris (Tremellales) PLoS ONE 10 (4) :e0126996.

http://www.ncbi.nlm.nih.gov/pubmed/25910228
2015 Yurkov,A., Guerreiro,M.A., Sharma,L., Carvalho,C., Fonseca,A. ( 2015 ) Multigene Assessment of the Species Boundaries and Sexual Status of the Basidiomycetous Yeasts Cryptococcus flavescens and C. terrestris (Tremellales) PLoS ONE 10 (3) :e0120400.

http://www.ncbi.nlm.nih.gov/pubmed/25811603